PDB: 45744 resultsInfo pagesStatus searchChemie searchBIRD

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8XPE	Crystal structure of Tris-bound TsaBgl (DATA III) Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, SODIUM ION, beta-glucosidase Authors: Nam, K.H. Deposit date: 2024-01-03 Release date: 2024-01-31 Last modified: 2024-04-17 Method: X-RAY DIFFRACTION (1.95 Å) Cite: Structural analysis of Tris binding in beta-glucosidases. Biochem.Biophys.Res.Commun., 700, 2024
8X83	The cryo-EM structure of insect gustatory receptor Gr43a I418A from Drosophila melanogaster in complex with fructose Descriptor: Gustatory receptor for sugar taste 43a, SODIUM ION, beta-D-fructofuranose Authors: Ma, D, Guo, J. Deposit date: 2023-11-27 Release date: 2024-02-07 Last modified: 2024-03-06 Method: ELECTRON MICROSCOPY (2.8 Å) Cite: Structural basis for sugar perception by Drosophila gustatory receptors. Science, 383, 2024
8VNE	Homing endonuclease I-PpoI-DNA complex:reaction at pH6.0 (K+ MES) with 500 uM Mn2+ for 10s Descriptor: DNA (5'-D(*TP*TP*GP*AP*CP*TP*CP*TP*CP*TP*TP*AP*AP*GP*AP*GP*AP*GP*TP*CP*A)-3'), GLYCEROL, Intron-encoded endonuclease I-PpoI, ... Authors: Chang, C, Gao, Y. Deposit date: 2024-01-13 Release date: 2024-07-10 Method: X-RAY DIFFRACTION (1.57 Å) Cite: Homing endonuclease I-PpoI-DNA complex:reaction with 500 uM Mg2+ for 160s To Be Published
8VNQ	Homing endonuclease H98A I-PpoI-DNA complex at pH6.0 (K+ MES) with 1 mM Mn2+ for 1800s Descriptor: DNA (5'-D(*TP*TP*GP*AP*CP*TP*CP*TP*CP*TP*TP*AP*AP*GP*AP*GP*AP*GP*TP*CP*A)-3'), GLYCEROL, Intron-encoded endonuclease I-PpoI, ... Authors: Chang, C, Gao, Y. Deposit date: 2024-01-13 Release date: 2024-07-10 Method: X-RAY DIFFRACTION (1.93 Å) Cite: Homing endonuclease I-PpoI-DNA complex:reaction with 500 uM Mg2+ for 160s To Be Published
9EX0	X-ray structure of a polyoxidovanadate/lysozyme adduct obtained when the protein is treated with [VIVO(acac)2] in 1.1 M NaCl, 0.1 M sodium acetate at pH 4.0 (Structure A) Descriptor: CHLORIDE ION, Lysozyme C, Polyoxidovanadate complex, ... Authors: Tito, G, Merlino, A, Ferraro, G. Deposit date: 2024-04-05 Release date: 2024-06-26 Last modified: 2024-07-31 Method: X-RAY DIFFRACTION (1.45 Å) Cite: Non-Covalent and Covalent Binding of New Mixed-Valence Cage-like Polyoxidovanadate Clusters to Lysozyme. Angew.Chem.Int.Ed.Engl., 63, 2024
8VMV	Homing endonuclease I-PpoI-DNA complex:reaction at pH7.0 (K+ MES) with 500 uM Mg2+ for 600s Descriptor: DNA (5'-D(*TP*TP*GP*AP*CP*TP*CP*TP*CP*TP*TP*AP*A)-3'), DNA (5'-D(P*GP*AP*GP*AP*GP*TP*CP*A)-3'), GLYCEROL, ... Authors: Chang, C, Gao, Y. Deposit date: 2024-01-13 Release date: 2024-07-10 Last modified: 2024-07-17 Method: X-RAY DIFFRACTION (1.59 Å) Cite: Homing endonuclease I-PpoI-DNA complex:reaction with 500 uM Mg2+ for 160s To Be Published
8XPC	Crystal structure of Tris-bound TsaBgl (DATA I) Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, SODIUM ION, beta-glucosidase Authors: Nam, K.H. Deposit date: 2024-01-03 Release date: 2024-01-31 Last modified: 2024-04-17 Method: X-RAY DIFFRACTION (1.55 Å) Cite: Structural analysis of Tris binding in beta-glucosidases. Biochem.Biophys.Res.Commun., 700, 2024
9FW2	SARS CoV-2 nsp10 in complex with the ExoN domain from nsp14 Descriptor: GLYCEROL, Guanine-N7 methyltransferase nsp14, Non-structural protein 11, ... Authors: Fisher, S.Z. Deposit date: 2024-06-28 Release date: 2024-07-10 Last modified: 2024-07-17 Method: X-RAY DIFFRACTION (1.77 Å) Cite: SARS CoV-2 nsp10 in complex with the ExoN domain from nsp14 To Be Published
8VN1	Homing endonuclease I-PpoI-DNA complex:reaction at pH6.0 (K+ MES) with 500 uM Mg2+ for 160s Descriptor: DNA (5'-D(*TP*TP*GP*AP*CP*TP*CP*TP*CP*TP*TP*AP*AP*GP*AP*GP*AP*GP*TP*CP*A)-3'), GLYCEROL, Intron-encoded endonuclease I-PpoI, ... Authors: Chang, C, Gao, Y. Deposit date: 2024-01-13 Release date: 2024-07-10 Method: X-RAY DIFFRACTION (1.79 Å) Cite: Homing endonuclease I-PpoI-DNA complex:reaction with 500 uM Mg2+ for 160s To Be Published
8XPD	Crystal structure of Tris-bound TsaBgl (DATA II) Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, SODIUM ION, beta-glucosidase Authors: Nam, K.H. Deposit date: 2024-01-03 Release date: 2024-01-31 Last modified: 2024-04-17 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Structural analysis of Tris binding in beta-glucosidases. Biochem.Biophys.Res.Commun., 700, 2024
8VNL	Homing endonuclease I-PpoI-DNA complex:reaction at pH6.0 (K+ MES) with 500 uM Mn2+ for 240s Descriptor: DNA (5'-D(*TP*TP*GP*AP*CP*TP*CP*TP*CP*TP*TP*AP*A)-3'), DNA (5'-D(P*GP*AP*GP*AP*GP*TP*CP*A)-3'), GLYCEROL, ... Authors: Chang, C, Gao, Y. Deposit date: 2024-01-13 Release date: 2024-07-10 Last modified: 2024-07-17 Method: X-RAY DIFFRACTION (1.64 Å) Cite: Homing endonuclease I-PpoI-DNA complex:reaction with 500 uM Mg2+ for 160s To Be Published
8VMT	Homing endonuclease I-PpoI-DNA complex:reaction at pH7.0 (K+ MES) with 500 uM Mg2+ for 160s Descriptor: DNA (5'-D(*TP*TP*GP*AP*CP*TP*CP*TP*CP*TP*TP*AP*AP*GP*AP*GP*AP*GP*TP*CP*A)-3'), GLYCEROL, Intron-encoded endonuclease I-PpoI, ... Authors: Chang, C, Gao, Y. Deposit date: 2024-01-13 Release date: 2024-07-10 Method: X-RAY DIFFRACTION (1.48 Å) Cite: Homing endonuclease I-PpoI-DNA complex:reaction with 500 uM Mg2+ for 160s To Be Published
8WEN	Bacteroides fragilis toxin 2 Descriptor: Metalloprotease, SODIUM ION, ZINC ION Authors: Guo, Y, Wen, Y. Deposit date: 2023-09-18 Release date: 2024-09-25 Method: X-RAY DIFFRACTION (1.97 Å) Cite: Bacteroides fragilis toxin 2 To Be Published
8Z76	The structure of thiocyanate dehydrogenase from Pelomicrobium methylotrophicum (pmTcDH), activated by crystals soaking with 1 mM CuCl2 during 6 months Descriptor: 1,2-ETHANEDIOL, COPPER (II) ION, SODIUM ION, ... Authors: Varfolomeeva, L.A, Solovieva, A.Y, Shipkov, N.S, Dergousova, N.I, Boyko, K.M, Tikhonova, T.V, Popov, V.O. Deposit date: 2024-04-19 Release date: 2024-05-08 Method: X-RAY DIFFRACTION (1.8 Å) Cite: The structure of thiocyanate dehydrogenase from Pelomicrobium methylotrophicum (pmTcDH), activated by crystals soaking with 1 mM CuCl2 To Be Published
8VII	EgtB-IV from Crocosphaera subtropica, an ergothioneine-biosynthetic type IV sulfoxide synthase in complex with cysteine and hercynine Descriptor: 1,2-ETHANEDIOL, CYSTEINE, MANGANESE (II) ION, ... Authors: Ireland, K.A, Davis, K.M. Deposit date: 2024-01-04 Release date: 2024-08-07 Last modified: 2024-09-11 Method: X-RAY DIFFRACTION (1.621 Å) Cite: Structural insights into the convergent evolution of sulfoxide synthase EgtB-IV, an ergothioneine-biosynthetic homolog of ovothiol synthase OvoA. Structure, 2024
8VN4	Homing endonuclease I-PpoI-DNA complex:reaction at pH6.0 (K+ MES) with 500 uM Mg2+ for 1200s Descriptor: DNA (5'-D(*TP*TP*GP*AP*CP*TP*CP*TP*CP*TP*TP*AP*A)-3'), DNA (5'-D(P*GP*AP*GP*AP*GP*TP*CP*A)-3'), GLYCEROL, ... Authors: Chang, C, Gao, Y. Deposit date: 2024-01-13 Release date: 2024-07-10 Method: X-RAY DIFFRACTION (1.75 Å) Cite: Homing endonuclease I-PpoI-DNA complex:reaction with 500 uM Mg2+ for 160s To Be Published
8VIK	EgtB-IV from Crocosphaera subtropica, a type IV sulfoxide synthase involved in ergothioneine biosynthesis Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, FE (III) ION, ... Authors: Ireland, K.A, Davis, K.M. Deposit date: 2024-01-04 Release date: 2024-08-07 Last modified: 2024-09-11 Method: X-RAY DIFFRACTION (1.961 Å) Cite: Structural insights into the convergent evolution of sulfoxide synthase EgtB-IV, an ergothioneine-biosynthetic homolog of ovothiol synthase OvoA. Structure, 2024
8VNF	Homing endonuclease I-PpoI-DNA complex:reaction at pH6.0 (K+ MES) with 500 uM Mn2+ for 20s Descriptor: DNA (5'-D(*TP*TP*GP*AP*CP*TP*CP*TP*CP*TP*TP*AP*AP*GP*AP*GP*AP*GP*TP*CP*A)-3'), GLYCEROL, Intron-encoded endonuclease I-PpoI, ... Authors: Chang, C, Gao, Y. Deposit date: 2024-01-13 Release date: 2024-07-10 Method: X-RAY DIFFRACTION (1.5 Å) Cite: Homing endonuclease I-PpoI-DNA complex:reaction with 500 uM Mg2+ for 160s To Be Published
8XF8	High-resolution structure of the siderophore periplasmic binding protein FtsB from Streptococcus pyogenes with ferrioxamine B Descriptor: 1,2-ETHANEDIOL, Ferrioxamine B, Iron-hydroxamate ABC transporter substrate-binding protein FtsB, ... Authors: Caaveiro, J.M.M, Fernandez-Perez, J, Tsumoto, K. Deposit date: 2023-12-13 Release date: 2024-10-09 Method: X-RAY DIFFRACTION (1.15 Å) Cite: Conserved binding mechanism for ligand promiscuity in the hydroxamate siderophore binding protein FtsB from Streptococcus pyogenes Structure
8VIL	EgtB-IV from Crocosphaera subtropica, an ergothioneine-biosynthetic type IV sulfoxide synthase in complex with N,N-dimethyl-histidine Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, FE (III) ION, ... Authors: Ireland, K.A, Davis, K.M. Deposit date: 2024-01-04 Release date: 2024-08-07 Last modified: 2024-09-11 Method: X-RAY DIFFRACTION (1.95 Å) Cite: Structural insights into the convergent evolution of sulfoxide synthase EgtB-IV, an ergothioneine-biosynthetic homolog of ovothiol synthase OvoA. Structure, 2024
8VNO	Homing endonuclease I-PpoI-DNA complex:reaction at pH6.0 (K+ MES) with 500 uM Mn2+ for 600s Descriptor: DNA (5'-D(*TP*TP*GP*AP*CP*TP*CP*TP*CP*TP*TP*AP*A)-3'), DNA (5'-D(P*GP*AP*GP*AP*GP*TP*CP*A)-3'), GLYCEROL, ... Authors: Chang, C, Gao, Y. Deposit date: 2024-01-13 Release date: 2024-07-10 Last modified: 2024-07-17 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Homing endonuclease I-PpoI-DNA complex:reaction with 500 uM Mg2+ for 160s To Be Published
8VJU	Structure of Human Neurolysin in complex with dynorphin A13 peptide Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Dynorphin A(1-13), ... Authors: Shi, K, Aihara, H. Deposit date: 2024-01-08 Release date: 2024-08-21 Method: X-RAY DIFFRACTION (1.99 Å) Cite: Structural basis of divergent substrate recognition and inhibition of human neurolysin. Sci Rep, 14, 2024
8VLJ	Crystal structure of the cacodylate-bound yeast cytosine deaminase (closed form) Descriptor: 1,2-ETHANEDIOL, CACODYLATE ION, Cytosine deaminase, ... Authors: Picard, M.-E, Grenier, J, Despres, P.C, Dube, A.K, Landry, C.R, Shi, R. Deposit date: 2024-01-11 Release date: 2024-08-21 Last modified: 2024-09-04 Method: X-RAY DIFFRACTION (1.39 Å) Cite: Compensatory mutations potentiate constructive neutral evolution by gene duplication. Science, 385, 2024
9C7A	Crystal structure of R149W neurodevelopmental disease-associated U2AF2 variant Descriptor: DNA/RNA (5'-R(P*UP*U)-D(P*U)-R(P*UP*U)-D(P*(BRU))-R(P*CP*C)-3'), GLYCEROL, SODIUM ION, ... Authors: Maji, D, Jenkins, J.L, Kielkopf, C.L. Deposit date: 2024-06-10 Release date: 2024-10-02 Method: X-RAY DIFFRACTION (1.4 Å) Cite: Recurrent neurodevelopmentally-associated variants of the pre-mRNA splicing factor U2AF2 alter RNA binding affinities and interactions To Be Published
8YJC	Structure of Vibrio vulnificus MARTX cysteine protease domain C3727A Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, INOSITOL HEXAKISPHOSPHATE, Multifunctional autoprocessing repeat-in-toxin (MARTX), ... Authors: Chen, L, Khan, H, Tan, L, Li, X, Zhang, G, Im, Y.J. Deposit date: 2024-03-01 Release date: 2024-07-10 Last modified: 2024-08-14 Method: X-RAY DIFFRACTION (1.3 Å) Cite: Structural basis of the activation of MARTX cysteine protease domain from Vibrio vulnificus. Plos One, 19, 2024

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