Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7P7D
DownloadVisualize
BU of 7p7d by Molmil
Rabbit muscle Glycogen Phosphorylase T state
Descriptor: DIMETHYL SULFOXIDE, Glycogen phosphorylase, muscle form
Authors:Stravodimos, G.A, Leonidas, D.D.
Deposit date:2021-07-19
Release date:2021-07-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Glycogen phosphorylase revisited: extending the resolution of the R- and T-state structures of the free enzyme and in complex with allosteric activators.
Acta Crystallogr.,Sect.F, 77, 2021
7TV6
DownloadVisualize
BU of 7tv6 by Molmil
Heterogeneous-backbone proteomimetic analogue of the disulfide-rich venom peptide lasiocepsin: native loop
Descriptor: Lasiocepsin heterogeneous-backbone proteomimetic analogue
Authors:Cabalteja, C.C, Harmon, T.H, Rao, S.R, Horne, W.S.
Deposit date:2022-02-04
Release date:2022-05-04
Last modified:2023-11-15
Method:SOLUTION NMR
Cite:Heterogeneous-Backbone Proteomimetic Analogues of Lasiocepsin, a Disulfide-Rich Antimicrobial Peptide with a Compact Tertiary Fold.
Acs Chem.Biol., 17, 2022
8A8K
DownloadVisualize
BU of 8a8k by Molmil
PAP phosphatase from Methanothermococcus thermolithotrophicus refined to 3.1 A
Descriptor: ADENOSINE MONOPHOSPHATE, GLYCEROL, MANGANESE (II) ION, ...
Authors:Jespersen, M, Wagner, T.
Deposit date:2022-06-23
Release date:2023-04-26
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Assimilatory sulfate reduction in the marine methanogen Methanothermococcus thermolithotrophicus.
Nat Microbiol, 8, 2023
6MY3
DownloadVisualize
BU of 6my3 by Molmil
Solution structure of gomesin at 310K
Descriptor: gomesin
Authors:Chin, Y.K.-Y, Deplazes, E.
Deposit date:2018-11-01
Release date:2019-11-06
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:The unusual conformation of cross-strand disulfide bonds is critical to the stability of beta-hairpin peptides.
Proteins, 88, 2020
7TV5
DownloadVisualize
BU of 7tv5 by Molmil
Disulfide-rich venom peptide lasiocepsin: P20A mutant
Descriptor: Lasiocepsin
Authors:Cabalteja, C.C, Harmon, T.H, Rao, S.R, Horne, W.S.
Deposit date:2022-02-04
Release date:2022-05-04
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Heterogeneous-Backbone Proteomimetic Analogues of Lasiocepsin, a Disulfide-Rich Antimicrobial Peptide with a Compact Tertiary Fold.
Acs Chem.Biol., 17, 2022
7TV8
DownloadVisualize
BU of 7tv8 by Molmil
Heterogeneous-backbone proteomimetic analogue of the disulfide-rich venom peptide lasiocepsin: D-Ala modified loop
Descriptor: Lasiocepsin heterogeneous-backbone proteomimetic analogue
Authors:Cabalteja, C.C, Harmon, T.H, Rao, S.R, Horne, W.S.
Deposit date:2022-02-04
Release date:2022-05-04
Last modified:2023-11-15
Method:SOLUTION NMR
Cite:Heterogeneous-Backbone Proteomimetic Analogues of Lasiocepsin, a Disulfide-Rich Antimicrobial Peptide with a Compact Tertiary Fold.
Acs Chem.Biol., 17, 2022
7TV7
DownloadVisualize
BU of 7tv7 by Molmil
Heterogeneous-backbone proteomimetic analogue of the disulfide-rich venom peptide lasiocepsin: beta-3-Lys modified loop
Descriptor: Lasiocepsin heterogeneous-backbone proteomimetic analogue
Authors:Cabalteja, C.C, Harmon, T.H, Rao, S.R, Horne, W.S.
Deposit date:2022-02-04
Release date:2022-05-04
Last modified:2023-11-15
Method:SOLUTION NMR
Cite:Heterogeneous-Backbone Proteomimetic Analogues of Lasiocepsin, a Disulfide-Rich Antimicrobial Peptide with a Compact Tertiary Fold.
Acs Chem.Biol., 17, 2022
1P8L
DownloadVisualize
BU of 1p8l by Molmil
New Crystal Structure of Chlorella Virus DNA Ligase-Adenylate
Descriptor: ADENOSINE MONOPHOSPHATE, PBCV-1 DNA ligase
Authors:Odell, M, Malinina, L, Teplova, M, Shuman, S.
Deposit date:2003-05-07
Release date:2003-08-26
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Analysis of the DNA Joining Repertoire of Chlorella Virus DNA ligase and a New Crystal Structure of the Ligase-Adenylate Intermediate
Nucleic Acids Res., 31, 2003
6O6Q
DownloadVisualize
BU of 6o6q by Molmil
Crystal structure of Cka1p, a casein kinase 2 alpha ortholog from Candida albicans
Descriptor: ADENOSINE MONOPHOSPHATE, CHLORIDE ION, Casein kinase 2 catalytic subunit, ...
Authors:Stogios, P.J, Evdokimova, E, Di Leo, R, Savchenko, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2019-03-07
Release date:2019-04-03
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of Cka1p, a casein kinase 2 alpha ortholog from Candida albicans
To Be Published
1Q9D
DownloadVisualize
BU of 1q9d by Molmil
Fructose-1,6-bisphosphatase Complexed with a New Allosteric Site Inhibitor (I-State)
Descriptor: 3-(4-HYDROXYBENZYL)-2-[1-({[2-(4-HYDROXYPHENYL)ETHYL]AMINO}CARBONYL)BUTYL]-4-OXO-3,6,11,11A-TETRAHYDRO-4H-PYRAZINO[1,2-B]ISOQUINOLIN-2-IUM-1-OLATE, 6-O-phosphono-beta-D-fructofuranose, Fructose-1,6-bisphosphatase, ...
Authors:Honzatko, R.B, Choe, J.Y.
Deposit date:2003-08-25
Release date:2003-12-02
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Inhibition of fructose-1,6-bisphosphatase by a new class of allosteric effectors
J.Biol.Chem., 278, 2003
1JGT
DownloadVisualize
BU of 1jgt by Molmil
CRYSTAL STRUCTURE OF BETA-LACTAM SYNTHETASE
Descriptor: BETA-LACTAM SYNTHETASE, DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, GLYCEROL, ...
Authors:Miller, M.T, Bachmann, B.O, Townsend, C.A, Rosenzweig, A.C.
Deposit date:2001-06-26
Release date:2001-12-28
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structure of beta-lactam synthetase reveals how to synthesize antibiotics instead of asparagine.
Nat.Struct.Biol., 8, 2001
3EH9
DownloadVisualize
BU of 3eh9 by Molmil
Crystal structure of death associated protein kinase complexed with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Death-associated protein kinase 1, SULFATE ION
Authors:McNamara, L.K, Watterson, D.M, Brunzelle, J.S.
Deposit date:2008-09-11
Release date:2009-04-28
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural insight into nucleotide recognition by human death-associated protein kinase.
Acta Crystallogr.,Sect.D, 65, 2009
1Z6D
DownloadVisualize
BU of 1z6d by Molmil
Ribonuclease A- IMP complex
Descriptor: INOSINIC ACID, Ribonuclease pancreatic
Authors:Hatzopoulos, G.N, Leonidas, D.D, Kardakaris, R, Kobe, J, Oikonomakos, N.G.
Deposit date:2005-03-22
Release date:2005-08-16
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:The binding of IMP to Ribonuclease A
Febs J., 272, 2005
2ATI
DownloadVisualize
BU of 2ati by Molmil
Glycogen Phosphorylase Inhibitors
Descriptor: Glycogen phosphorylase, liver form, N-(2-CHLORO-4-FLUOROBENZOYL)-N'-(5-HYDROXY-2-METHOXYPHENYL)UREA, ...
Authors:Klabunde, T, Wendt, K.U, Kadereit, D, Brachvogel, V, Burger, H.J, Herling, A.W, Oikonomakos, N.G, Schmoll, D, Sarubbi, E, von Roedern, E, Schoenafinger, K, Defossa, E.
Deposit date:2005-08-25
Release date:2006-08-25
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Acyl ureas as human liver glycogen phosphorylase inhibitors for the treatment of type 2 diabetes.
J.Med.Chem., 48, 2005
8BIT
DownloadVisualize
BU of 8bit by Molmil
Crystal structure of acyl-CoA synthetase from Metallosphaera sedula in complex with Coenzyme A and acetyl-AMP
Descriptor: 4-hydroxybutyrate--CoA ligase 1, COENZYME A, [[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] ethanoate
Authors:Capra, N, Thunnissen, A.M.W.H, Janssen, D.B.
Deposit date:2022-11-02
Release date:2023-11-15
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Adapting an acyl CoA ligase from Metallosphaera sedula for lactam formation by structure-guided protein engineering
Front Catal, 4, 2024
1EXD
DownloadVisualize
BU of 1exd by Molmil
CRYSTAL STRUCTURE OF A TIGHT-BINDING GLUTAMINE TRNA BOUND TO GLUTAMINE AMINOACYL TRNA SYNTHETASE
Descriptor: ADENOSINE MONOPHOSPHATE, GLUTAMINE TRNA APTAMER, GLUTAMINYL-TRNA SYNTHETASE, ...
Authors:Bullock, T.L, Sherlin, L.D, Perona, J.J.
Deposit date:2000-05-02
Release date:2000-05-15
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Tertiary core rearrangements in a tight binding transfer RNA aptamer.
Nat.Struct.Biol., 7, 2000
6RSF
DownloadVisualize
BU of 6rsf by Molmil
NMR structure of pleurocidin KR in SDS micelles
Descriptor: Pleurocidin
Authors:Manzo, G, Mason, A.J.
Deposit date:2019-05-21
Release date:2020-12-09
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:A pleurocidin analogue with greater conformational flexibility, enhanced antimicrobial potency and in vivo therapeutic efficacy.
Commun Biol, 3, 2020
6RSG
DownloadVisualize
BU of 6rsg by Molmil
NMR structure of pleurocidin VA in SDS micelles
Descriptor: Pleurocidin
Authors:Manzo, G, Mason, A.J.
Deposit date:2019-05-21
Release date:2020-12-09
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:A pleurocidin analogue with greater conformational flexibility, enhanced antimicrobial potency and in vivo therapeutic efficacy.
Commun Biol, 3, 2020
3W2W
DownloadVisualize
BU of 3w2w by Molmil
Crystal structure of the Cmr2dHD-Cmr3 subcomplex bound to ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CRISPR system Cmr subunit Cmr2, CRISPR system Cmr subunit Cmr3, ...
Authors:Numata, T, Osawa, T.
Deposit date:2012-12-06
Release date:2013-10-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of the Cmr2-Cmr3 Subcomplex in the CRISPR-Cas RNA Silencing Effector Complex.
J.Mol.Biol., 425, 2013
2CNQ
DownloadVisualize
BU of 2cnq by Molmil
Atomic resolution structure of SAICAR-synthase from Saccharomyces cerevisiae complexed with ADP, AICAR, succinate
Descriptor: ADENOSINE MONOPHOSPHATE, ADENOSINE-5'-DIPHOSPHATE, AMINOIMIDAZOLE 4-CARBOXAMIDE RIBONUCLEOTIDE, ...
Authors:Urusova, D.V, Antonyuk, S.V, Grebenko, A.I, Levdikov, V.M, Barynin, V.V, Popov, A.N, Lamzin, V.S, Melik-Adamyan, W.R.
Deposit date:2006-05-23
Release date:2006-06-08
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1 Å)
Cite:Saicar Synthase: Substrate Recognition, Conformational Flexibility and Catalysis.
To be Published
3ZC7
DownloadVisualize
BU of 3zc7 by Molmil
VbhT Fic protein from Bartonella schoenbuchensis in complex with VbhA antitoxin and ATP
Descriptor: ADENOSINE MONOPHOSPHATE-PROTEIN TRANSFERASE VBHT, ADENOSINE-5'-TRIPHOSPHATE, ANTITOXIN VBHA
Authors:Goepfert, A, Schirmer, T.
Deposit date:2012-11-19
Release date:2013-06-19
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Conserved Inhibitory Mechanism and Competent ATP Binding Mode for Adenylyltransferases with Fic Fold.
Plos One, 8, 2013
3ZCB
DownloadVisualize
BU of 3zcb by Molmil
VbhT Fic protein from Bartonella schoenbuchensis in complex with VbhA antitoxin mutant E24G and ATP
Descriptor: ADENOSINE MONOPHOSPHATE-PROTEIN TRANSFERASE VBHT, ADENOSINE-5'-TRIPHOSPHATE, ANTITOXIN VBHA, ...
Authors:Goepfert, A, Schirmer, T.
Deposit date:2012-11-19
Release date:2013-06-19
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Conserved Inhibitory Mechanism and Competent ATP Binding Mode for Adenylyltransferases with Fic Fold.
Plos One, 8, 2013
1G51
DownloadVisualize
BU of 1g51 by Molmil
ASPARTYL TRNA SYNTHETASE FROM THERMUS THERMOPHILUS AT 2.4 A RESOLUTION
Descriptor: ADENOSINE MONOPHOSPHATE, ASPARTYL-ADENOSINE-5'-MONOPHOSPHATE, ASPARTYL-TRNA SYNTHETASE, ...
Authors:Poterzsman, A, Delarue, M, Thierry, J.C, Moras, D.
Deposit date:2000-10-30
Release date:2000-12-06
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Synthesis and recognition of aspartyl-adenylate by Thermus thermophilus aspartyl-tRNA synthetase.
J.Mol.Biol., 244, 1994
7LJL
DownloadVisualize
BU of 7ljl by Molmil
Structure of the Enterobacter cloacae CD-NTase CdnD in complex with ATP
Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-TRIPHOSPHATE, Cyclic AMP-AMP-GMP synthase, ...
Authors:Govande, A, Lowey, B, Eaglesham, J.B, Whiteley, A.W, Kranzusch, P.J.
Deposit date:2021-01-29
Release date:2021-06-02
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Molecular basis of CD-NTase nucleotide selection in CBASS anti-phage defense.
Cell Rep, 35, 2021
1UN9
DownloadVisualize
BU of 1un9 by Molmil
Crystal structure of the dihydroxyacetone kinase from C. freundii in complex with AMP-PNP and Mg2+
Descriptor: DIHYDROXYACETONE, DIHYDROXYACETONE KINASE, MAGNESIUM ION, ...
Authors:Siebold, C, Arnold, I, Garcia-Alles, L.F, Baumann, U, Erni, B.
Deposit date:2003-09-08
Release date:2003-10-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Crystal Structure of the Citrobacter Freundii Dihydroxyacetone Kinase Reveals an Eight-Stranded Alpha-Helical Barrel ATP-Binding Domain
J.Biol.Chem., 278, 2003

224572

數據於2024-09-04公開中

PDB statisticsPDBj update infoContact PDBjnumon