Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6V3D
DownloadVisualize
BU of 6v3d by Molmil
Cryo-EM structure of the Acinetobacter baumannii Ribosome: 50S subunit
Descriptor: 23s ribosomal RNA, 50S ribosomal protein L13, 50S ribosomal protein L14, ...
Authors:Morgan, C.E, Yu, E.W.
Deposit date:2019-11-25
Release date:2020-02-05
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.95 Å)
Cite:Cryo-electron Microscopy Structure of the Acinetobacter baumannii 70S Ribosome and Implications for New Antibiotic Development.
Mbio, 11, 2020
4IFH
DownloadVisualize
BU of 4ifh by Molmil
Crystal structure of human insulin degrading enzyme (IDE) in complex with compound BDM44619
Descriptor: Insulin-degrading enzyme, N-({1-[(2R)-4-(hydroxyamino)-1-(naphthalen-2-yl)-4-oxobutan-2-yl]-1H-1,2,3-triazol-4-yl}methyl)-4-methylbenzamide, ZINC ION
Authors:Liang, W.G, Guo, Q, Deprez, R, Deprez, B, Tang, W.
Deposit date:2012-12-14
Release date:2013-12-18
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.286 Å)
Cite:Catalytic site inhibition of insulin-degrading enzyme by a small molecule induces glucose intolerance in mice.
Nat Commun, 6, 2015
5YSW
DownloadVisualize
BU of 5ysw by Molmil
Crystal Structure Analysis of Rif16 in complex with R-L
Descriptor: (2S,12E,14E,16S,17S,18R,19R,20R,21S,22R,23S,24E)-21-(acetyloxy)-5,6,17,19-tetrahydroxy-23-methoxy-2,4,12,16,18,20,22-heptamethyl-1,11-dioxo-1,2-dihydro-2,7-(epoxypentadeca[1,11,13]trienoimino)naphtho[2,1-b]furan-9-yl hydroxyacetate, Cytochrome P450, PROTOPORPHYRIN IX CONTAINING FE
Authors:Li, F.W, Qi, F.F, Xiao, Y.L, Zhao, G.P, Li, S.Y.
Deposit date:2017-11-15
Release date:2018-07-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Deciphering the late steps of rifamycin biosynthesis.
Nat Commun, 9, 2018
5U2B
DownloadVisualize
BU of 5u2b by Molmil
Crystal Structure of the ER-alpha Ligand-binding Domain (Y537S) in Complex with the phenylamino-substituted estrogen, (8R,9S,13S,14S,17S)-13-methyl-17-(phenylamino)-7,8,9,11,12,13,14,15,16,17-decahydro-6H-cyclopenta[a]phenanthren-3-ol, without a coactivator peptide
Descriptor: (8~{R},9~{S},13~{S},14~{S},17~{S})-13-methyl-17-phenylazanyl-6,7,8,9,11,12,14,15,16,17-decahydrocyclopenta[a]phenanthren-3-ol, Estrogen receptor
Authors:Nwachukwu, J.C, Nowak, J, Carlson, K.E, Katzenellenbogen, J.A, Nettles, K.W.
Deposit date:2016-11-30
Release date:2017-04-26
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Structural and Molecular Mechanisms of Cytokine-Mediated Endocrine Resistance in Human Breast Cancer Cells.
Mol. Cell, 65, 2017
7BW1
DownloadVisualize
BU of 7bw1 by Molmil
Crystal structure of Steroid 5-alpha-reductase 2 in complex with Finasteride
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 3-oxo-5-alpha-steroid 4-dehydrogenase 2, SULFATE ION, ...
Authors:Xiao, Q, Zhang, C, Wei, Z.
Deposit date:2020-04-13
Release date:2020-08-05
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of human steroid 5 alpha-reductase 2 with anti-androgen drug finasteride.
Res Sq, 2020
5YRZ
DownloadVisualize
BU of 5yrz by Molmil
Toxin-Antitoxin complex from Streptococcus pneumoniae
Descriptor: GLYCEROL, HicA, HicB, ...
Authors:Kang, S.M, Kim, D.H.
Deposit date:2017-11-11
Release date:2018-05-23
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.304 Å)
Cite:Functional insights into the Streptococcus pneumoniae HicBA toxin-antitoxin system based on a structural study.
Nucleic Acids Res., 46, 2018
8GUH
DownloadVisualize
BU of 8guh by Molmil
Serine Palmitoyltransferase from Sphingobacterium multivorum complexed with Tris
Descriptor: 1,2-ETHANEDIOL, Serine palmitoyltransferase, [4-[[[2-(hydroxymethyl)-1,3-bis(oxidanyl)propan-2-yl]amino]methyl]-6-methyl-5-oxidanyl-pyridin-3-yl]methyl dihydrogen phosphate
Authors:Murakami, T, Takahashi, A, Katayama, A, Miyahara, I, Kamiya, N, Ikushiro, H, Yano, T.
Deposit date:2022-09-12
Release date:2023-07-19
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of Sphingobacterium multivorum serine palmitoyltransferase complexed with tris(hydroxymethyl)aminomethane.
Acta Crystallogr.,Sect.F, 78, 2022
5Y0I
DownloadVisualize
BU of 5y0i by Molmil
Solution structure of arenicin-3 derivative N1
Descriptor: NZ17074(N1)
Authors:Liu, X.H, Wang, J.H.
Deposit date:2017-07-17
Release date:2017-07-26
Method:SOLUTION NMR
Cite:Antibacterial and detoxifying activity of NZ17074 analogues with multi-layers of selective antimicrobial actions against Escherichia coli and Salmonella enteritidis
Sci Rep, 7, 2017
5Y2O
DownloadVisualize
BU of 5y2o by Molmil
Structure of PPARgamma ligand binding domain-pioglitazone complex
Descriptor: (5S)-5-[[4-[2-(5-ethylpyridin-2-yl)ethoxy]phenyl]methyl]-1,3-thiazolidine-2,4-dione, Peroxisome proliferator-activated receptor gamma
Authors:Im, Y.J, Lee, M.
Deposit date:2017-07-26
Release date:2017-12-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.801 Å)
Cite:Structures of PPAR gamma complexed with lobeglitazone and pioglitazone reveal key determinants for the recognition of antidiabetic drugs
Sci Rep, 7, 2017
7C1J
DownloadVisualize
BU of 7c1j by Molmil
Crystal structure of the receiver domain of sensor histidine kinase PA1611 (PA1611REC) from Pseudomonas aeruginosa PAO1 with magnesium ion coordinated in the active site cleft
Descriptor: Histidine kinase, MAGNESIUM ION
Authors:Chen, S.K, Guan, H.H, Wu, P.H, Lin, L.T, Wu, M.C, Chang, H.Y, Chen, N.C, Lin, C.C, Chuankhayan, P, Huang, Y.C, Lin, P.J, Chen, C.J.
Deposit date:2020-05-04
Release date:2020-11-04
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structural insights into the histidine-containing phospho-transfer protein and receiver domain of sensor histidine kinase suggest a complex model in the two-component regulatory system in Pseudomonas aeruginosa
Iucrj, 7, 2020
6VHD
DownloadVisualize
BU of 6vhd by Molmil
FphF, Staphylococcus aureus fluorophosphonate-binding serine hydrolases F, KT129 bound
Descriptor: (2~{R})-2-phenylpiperidine-1-carbaldehyde, Esterase family protein
Authors:Fellner, M, Mace, P.D.
Deposit date:2020-01-09
Release date:2020-09-16
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Structural Basis for the Inhibitor and Substrate Specificity of the Unique Fph Serine Hydrolases of Staphylococcus aureus .
Acs Infect Dis., 6, 2020
8GL9
DownloadVisualize
BU of 8gl9 by Molmil
Co-crystal structure of caPCNA bound to AOH1160 derivative 1LE
Descriptor: CHLORIDE ION, N~2~-(naphthalene-1-carbonyl)-N-(2-phenoxyphenyl)-L-alpha-glutamine, Proliferating cell nuclear antigen
Authors:Jossart, J, Kenjic, N, Malkas, L.H, Hickey, R.J, Perry, J.J.
Deposit date:2023-03-21
Release date:2023-07-26
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:Small molecule targeting of transcription-replication conflict for selective chemotherapy.
Cell Chem Biol, 30, 2023
5FTQ
DownloadVisualize
BU of 5ftq by Molmil
Crystal structure of the ALK kinase domain in complex with Cmpd 17
Descriptor: ALK TYROSINE KINASE RECEPTOR, GLYCEROL, N-[5-(3,5-DIFLUOROBENZYL)-1H-INDAZOL-3-YL]-2-[(4-HYDROXYCYCLOHEXYL)AMINO]-4-(4-METHYLPIPERAZIN-1-YL) BENZAMIDE
Authors:Bossi, R, Canevari, G, Fasolini, M, Menichincheri, M, Ardini, E, Magnaghi, P, Avanzi, N, Banfi, P, Buffa, L, Ceriani, L, Colombo, M, Corti, L, Donati, D, Felder, E, Fiorelli, C, Fiorentini, F, Galvani, A, Isacchi, A, Lombardi Borgia, A, Marchionni, C, Nesi, M, Orrenius, C, Panzeri, A, Perrone, E, Pesenti, E, Rusconi, L, Saccardo, M.B, Vanotti, E, Orsini, P.
Deposit date:2016-01-14
Release date:2016-04-06
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Discovery of Entrectinib: A New 3-Aminoindazole as a Potent Anaplastic Lymphoma Kinase (Alk), C-Ros Oncogene 1 Kinase (Ros1), and Pan-Tropomyosin Receptor Kinases (Pan-Trks) Inhibitor.
J.Med.Chem., 59, 2016
8GLA
DownloadVisualize
BU of 8gla by Molmil
Co-crystal structure of caPCNA bound to the AOH1996 derivative, AOH1996-1LE
Descriptor: CHLORIDE ION, N-[2-(3-methoxyphenoxy)phenyl]-N~2~-(naphthalene-1-carbonyl)-L-alpha-glutamine, Proliferating cell nuclear antigen
Authors:Jossart, J, Perry, J.J.
Deposit date:2023-03-21
Release date:2023-07-26
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.77 Å)
Cite:Small molecule targeting of transcription-replication conflict for selective chemotherapy.
Cell Chem Biol, 30, 2023
8GJH
DownloadVisualize
BU of 8gjh by Molmil
Salmonella ArnA
Descriptor: Bifunctional polymyxin resistance protein ArnA, URIDINE-5'-DIPHOSPHATE-GLUCURONIC ACID
Authors:Sousa, M.C, Mitchell, M.E, Gatzeva-Topalova, P.Z.
Deposit date:2023-03-15
Release date:2023-08-02
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Targeting the Conformational Change in ArnA Dehydrogenase for Selective Inhibition of Polymyxin Resistance.
Biochemistry, 62, 2023
7B9O
DownloadVisualize
BU of 7b9o by Molmil
Crystal structure of Retinoic Acid Receptor alpha (RXRA) in complexed with S169 inhibitor
Descriptor: 3-(5-(3,5-bis(trifluoromethyl)phenyl)-4-phenyloxazol-2-yl)propanoic acid, Nuclear receptor coactivator 2, Retinoic acid receptor RXR-alpha
Authors:Ni, X, Chaikuad, A, Schierle, S, Merk, D, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2020-12-14
Release date:2021-02-10
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Oxaprozin Analogues as Selective RXR Agonists with Superior Properties and Pharmacokinetics.
J.Med.Chem., 64, 2021
4IPC
DownloadVisualize
BU of 4ipc by Molmil
Structure of the N-terminal domain of RPA70, E7R mutant
Descriptor: Replication protein A 70 kDa DNA-binding subunit
Authors:Feldkamp, M.D, Frank, A.O, Vangamudi, B, Fesik, S.W, Chazin, W.J.
Deposit date:2013-01-09
Release date:2013-09-11
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.22 Å)
Cite:Surface Reengineering of RPA70N Enables Cocrystallization with an Inhibitor of the Replication Protein A Interaction Motif of ATR Interacting Protein.
Biochemistry, 52, 2013
8G93
DownloadVisualize
BU of 8g93 by Molmil
Crystal structures of 17-beta-hydroxysteroid dehydrogenase 13
Descriptor: 3-fluoro-N-({(1r,4r)-4-[(2-fluorophenoxy)methyl]-1-hydroxycyclohexyl}methyl)-4-hydroxybenzamide, Hydroxysteroid 17-beta dehydrogenase 13, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Liu, S.
Deposit date:2023-02-21
Release date:2023-08-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Structural basis of lipid-droplet localization of 17-beta-hydroxysteroid dehydrogenase 13.
Nat Commun, 14, 2023
8G9V
DownloadVisualize
BU of 8g9v by Molmil
Crystal structures of 17-beta-hydroxysteroid dehydrogenase 13
Descriptor: 17-beta-hydroxysteroid dehydrogenase 13, 4-{[2,5-dimethyl-3-(4-methylbenzene-1-sulfonyl)benzene-1-sulfonyl]amino}benzoic acid, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Liu, S.
Deposit date:2023-02-22
Release date:2023-08-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.645 Å)
Cite:Structural basis of lipid-droplet localization of 17-beta-hydroxysteroid dehydrogenase 13.
Nat Commun, 14, 2023
4IPD
DownloadVisualize
BU of 4ipd by Molmil
Structure of the N-terminal domain of RPA70, E100R mutant
Descriptor: Replication protein A 70 kDa DNA-binding subunit
Authors:Feldkamp, M.D, Frank, A.O, Vangamudi, B, Fesik, S.W, Chazin, W.J.
Deposit date:2013-01-09
Release date:2013-09-11
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Surface Reengineering of RPA70N Enables Cocrystallization with an Inhibitor of the Replication Protein A Interaction Motif of ATR Interacting Protein.
Biochemistry, 52, 2013
4IPG
DownloadVisualize
BU of 4ipg by Molmil
Structure of the N-terminal domain of RPA70, E7R, E100R mutant
Descriptor: Replication protein A 70 kDa DNA-binding subunit
Authors:Feldkamp, M.D, Frank, A.O, Vangamudi, B, Fesik, S.W, Chazin, W.J.
Deposit date:2013-01-09
Release date:2013-09-11
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Surface Reengineering of RPA70N Enables Cocrystallization with an Inhibitor of the Replication Protein A Interaction Motif of ATR Interacting Protein.
Biochemistry, 52, 2013
4IPH
DownloadVisualize
BU of 4iph by Molmil
Structure of N-terminal domain of RPA70 in complex with VU079104 inhibitor
Descriptor: Replication protein A 70 kDa DNA-binding subunit, ~{N}-(2,3-dimethylphenyl)-7-oxidanylidene-12-sulfanylidene-5,11-dithia-1,8-diazatricyclo[7.3.0.0^{2,6}]dodeca-2(6),3,9-triene-10-carboxamide
Authors:Feldkamp, M.D, Frank, A.O, Vangamudi, B, Fesik, S.W, Chazin, W.J.
Deposit date:2013-01-09
Release date:2013-09-11
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Surface Reengineering of RPA70N Enables Cocrystallization with an Inhibitor of the Replication Protein A Interaction Motif of ATR Interacting Protein.
Biochemistry, 52, 2013
8G89
DownloadVisualize
BU of 8g89 by Molmil
HSD17B13 in complex with cofactor and inhibitor
Descriptor: 3-fluoro-N-({(1r,4r)-4-[(2-fluorophenoxy)methyl]-1-hydroxycyclohexyl}methyl)-4-hydroxybenzamide, Hydroxysteroid 17-beta dehydrogenase 13, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Liu, S.
Deposit date:2023-02-17
Release date:2023-08-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.222 Å)
Cite:Structural basis of lipid-droplet localization of 17-beta-hydroxysteroid dehydrogenase 13.
Nat Commun, 14, 2023
8G84
DownloadVisualize
BU of 8g84 by Molmil
Crystal structures of HSD17B13 complexes
Descriptor: Hydroxysteroid 17-beta dehydrogenase 13, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Liu, S.
Deposit date:2023-02-17
Release date:2023-08-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.467 Å)
Cite:Structural basis of lipid-droplet localization of 17-beta-hydroxysteroid dehydrogenase 13.
Nat Commun, 14, 2023
5TSY
DownloadVisualize
BU of 5tsy by Molmil
Structure of the glycoside hydrolase domain of PelA variant E218A from Pseudomonas aeruginosa
Descriptor: PelA
Authors:Baker, P, Pfoh, R, Howell, P.L.
Deposit date:2016-10-31
Release date:2017-11-08
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Microbial glycoside hydrolases display cross-kingdom activity against bacterial and fungal biofilms
To Be Published

222624

數據於2024-07-17公開中

PDB statisticsPDBj update infoContact PDBjnumon