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7KPC
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BU of 7kpc by Molmil
Dihydrodipicolinate synthase (DHDPS) from C.jejuni, E88Q mutant with pyruvate bound in the active site and L-lysine bound at the allosteric site
Descriptor: 1,2-ETHANEDIOL, 4-hydroxy-tetrahydrodipicolinate synthase, ACETATE ION, ...
Authors:Saran, S, Sanders, D.A.R.
Deposit date:2020-11-10
Release date:2021-11-17
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:THE ALLOSTERIC SITE RESIDUE, E88 INTERACTS WITH THE INHIBITORS TO TRANSMIT THE ALLOSTERIC INHIBITION SIGNALS IN Cj.DHDPS BY FORMING A HYDROGEN BOND.
To Be Published
7KR7
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BU of 7kr7 by Molmil
Dihydrodipicolinate synthase (DHDPS) from C.jejuni, H56A mutant with pyruvate bound in the active site and L-lysine at the allosteric site
Descriptor: 1,2-ETHANEDIOL, 4-hydroxy-tetrahydrodipicolinate synthase, ACETATE ION, ...
Authors:Saran, S, Sanders, D.A.R.
Deposit date:2020-11-18
Release date:2021-11-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:ALLOSTERIC SITE RESIDUE 'H56' CAPS THE INHIBITOR AT THE TIGHT DIMER INTERFACE FOR TRANSMITTING THE ALLOSTERIC INHIBITION SIGNALS IN Cj.DHDPS
To Be Published
7KR8
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BU of 7kr8 by Molmil
Dihydrodipicolinate synthase (DHDPS) from C.jejuni, H56A mutant with pyruvate bound in the active site
Descriptor: 1,2-ETHANEDIOL, 4-hydroxy-tetrahydrodipicolinate synthase, ACETATE ION, ...
Authors:Saran, S, Sanders, D.A.R.
Deposit date:2020-11-19
Release date:2021-11-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:ALLOSTERIC SITE RESIDUE 'H56' CAPS THE INHIBITOR AT THE TIGHT DIMER INTERFACE FOR TRANSMITTING THE ALLOSTERIC INHIBITION SIGNALS IN Cj.DHDPS
To Be Published
7KU6
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BU of 7ku6 by Molmil
Dihydrodipicolinate synthase (DHDPS) from C.jejuni, H56N mutant with pyruvate bound in the active site
Descriptor: 1,2-ETHANEDIOL, 4-hydroxy-tetrahydrodipicolinate synthase, MAGNESIUM ION, ...
Authors:Saran, S, Sanders, D.A.R.
Deposit date:2020-11-24
Release date:2021-12-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:ALLOSTERIC SITE RESIDUE 'H56' CAPS THE INHIBITOR AT THE TIGHT DIMER INTERFACE FOR TRANSMITTING THE ALLOSTERIC INHIBITION SIGNALS IN Cj.DHDPS
To Be Published
7KWN
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BU of 7kwn by Molmil
Dihydrodipicolinate synthase from C. jejuni with pyruvate bound to the active site in C2221 space group
Descriptor: 1,2-ETHANEDIOL, 4-hydroxy-tetrahydrodipicolinate synthase, ACETATE ION, ...
Authors:Saran, S, Sanders, D.A.R.
Deposit date:2020-12-01
Release date:2021-12-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:B-FACTOR ANALYSIS SUGGEST THAT L-LYSINE AND R, R-BISLYSINE ALLOSTERICALLY INHIBIT Cj.DHDPS ENZYME BY DECREASING PROTEIN DYNAMICS.
To Be Published
7KTO
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BU of 7kto by Molmil
Dihydrodipicolinate synthase (DHDPS) from C.jejuni, H56A mutant with pyruvate bound in the active site and R,R-bislysine bound at the allosteric site
Descriptor: (2R,5R)-2,5-diamino-2,5-bis(4-aminobutyl)hexanedioic acid, 1,2-ETHANEDIOL, 4-hydroxy-tetrahydrodipicolinate synthase, ...
Authors:Saran, S, Sanders, D.A.R.
Deposit date:2020-11-24
Release date:2021-12-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:ALLOSTERIC SITE RESIDUE 'H56' CAPS THE INHIBITOR AT THE TIGHT DIMER INTERFACE FOR TRANSMITTING THE ALLOSTERIC INHIBITION SIGNALS IN Cj.DHDPS
To Be Published
7KXH
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BU of 7kxh by Molmil
Dihydrodipicolinate synthase (DHDPS) from C.jejuni with pyruvate bound in the active site and R,R-bislysine bound at the allosteric site in C2221 space group
Descriptor: (2R,5R)-2,5-diamino-2,5-bis(4-aminobutyl)hexanedioic acid, 1,2-ETHANEDIOL, 4-hydroxy-tetrahydrodipicolinate synthase, ...
Authors:Saran, S, Sanders, D.A.R.
Deposit date:2020-12-03
Release date:2021-12-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:B-FACTOR ANALYSIS SUGGEST THAT L-LYSINE AND R, R-BISLYSINE ALLOSTERICALLY INHIBIT Cj.DHDPS ENZYME BY DECREASING PROTEIN DYNAMICS.
To Be Published
7KWF
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BU of 7kwf by Molmil
Dihydrodipicolinate synthase (DHDPS) from C.jejuni, H56N mutant with pyruvate bound in the active site and R,R-bislysine bound at the allosteric site
Descriptor: (2R,5R)-2,5-diamino-2,5-bis(4-aminobutyl)hexanedioic acid, 4-hydroxy-tetrahydrodipicolinate synthase, ACETATE ION, ...
Authors:Saran, S, Sanders, D.A.R.
Deposit date:2020-11-30
Release date:2021-12-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.82 Å)
Cite:ALLOSTERIC SITE RESIDUE 'H56' CAPS THE INHIBITOR AT THE TIGHT DIMER INTERFACE FOR TRANSMITTING THE ALLOSTERIC INHIBITION SIGNALS IN Cj.DHDPS
To Be Published
7KWP
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BU of 7kwp by Molmil
Dihydrodipicolinate synthase (DHDPS) from C.jejuni with pyruvate bound in the active site and L-lysine bound at the allosteric site in C2221 space group
Descriptor: 1,2-ETHANEDIOL, 4-hydroxy-tetrahydrodipicolinate synthase, DI(HYDROXYETHYL)ETHER, ...
Authors:Saran, S, Sanders, D.A.R.
Deposit date:2020-12-01
Release date:2021-12-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:B-FACTOR ANALYSIS SUGGEST THAT L-LYSINE AND R, R-BISLYSINE ALLOSTERICALLY INHIBIT Cj.DHDPS ENZYME BY DECREASING PROTEIN DYNAMICS.
To Be Published
7KX1
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BU of 7kx1 by Molmil
Dihydrodipicolinate synthase (DHDPS) from C.jejuni, Y110F mutant with pyruvate bound in the active in C2221 space group
Descriptor: 1,2-ETHANEDIOL, 4-hydroxy-tetrahydrodipicolinate synthase, ACETATE ION, ...
Authors:Saran, S, Sanders, D.A.R.
Deposit date:2020-12-02
Release date:2021-12-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:B-FACTOR ANALYSIS SUGGEST THAT L-LYSINE AND R, R-BISLYSINE ALLOSTERICALLY INHIBIT Cj.DHDPS ENZYME BY DECREASING PROTEIN DYNAMICS
To Be Published
7KZ2
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BU of 7kz2 by Molmil
Dihydrodipicolinate synthase (DHDPS) from C.jejuni, Y110F mutant with pyruvate bound in the active site and L-lysine bound at the allosteric site in C2221 space group
Descriptor: 1,2-ETHANEDIOL, 4-hydroxy-tetrahydrodipicolinate synthase, ACETATE ION, ...
Authors:Saran, S, Sanders, D.A.R.
Deposit date:2020-12-09
Release date:2021-12-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:B-FACTOR ANALYSIS SUGGEST THAT L-LYSINE AND R, R-BISLYSINE ALLOSTERICALLY INHIBIT Cj.DHDPS ENZYME BY DECREASING PROTEIN DYNAMICS.
To Be Published
7L4B
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BU of 7l4b by Molmil
Dihydrodipicolinate synthase (DHDPS) from C.jejuni with pyruvate bound in the active site in P1211 space group
Descriptor: 1,2-ETHANEDIOL, 4-hydroxy-tetrahydrodipicolinate synthase, ACETATE ION, ...
Authors:Saran, S, Sanders, D.A.R.
Deposit date:2020-12-18
Release date:2021-12-22
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.42 Å)
Cite:B-FACTOR ANALYSIS SUGGEST THAT L-LYSINE AND R, R-BISLYSINE ALLOSTERICALLY INHIBIT Cj.DHDPS ENZYME BY DECREASING PROTEIN DYNAMICS.
To Be Published
5OD5
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BU of 5od5 by Molmil
Periplasmic binding protein CeuE complexed with a synthetic catalyst
Descriptor: 2,5,8,11,14,17,20,23-OCTAOXAPENTACOSAN-25-OL, 4-(aminomethyl)-~{N}-(pyridin-2-ylmethyl)benzenesulfonamide, Azotochelin, ...
Authors:Duhme-Klair, A.K, Raines, D.J, Clarke, J.E, Blagova, E.V, Dodson, E.J, Wilson, K.S.
Deposit date:2017-07-04
Release date:2018-08-01
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Redox-switchable siderophore anchor enables reversible artificial metalloenzyme assembly
Nat Catal, 2018
7LCF
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BU of 7lcf by Molmil
Dihydrodipicolinate synthase (DHDPS) from C.jejuni, with pyruvate bound in the active site and L-lysine bound at the allosteric site in C121 space group
Descriptor: 4-hydroxy-tetrahydrodipicolinate synthase, LYSINE, MAGNESIUM ION
Authors:Saran, S, Sanders, D.A.R.
Deposit date:2021-01-10
Release date:2022-01-12
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:B-factors: L- lysine and R, R- bisLysine allosterically inhibit Cj. DHDPS Enzyme by decreasing its protein dynamics
To Be Published
5NBD
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BU of 5nbd by Molmil
PglK flippase in complex with inhibitory nanobody
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Nanobody, WlaB protein
Authors:Perez, C, Pardon, E, Steyaert, J, Locher, K.P.
Deposit date:2017-03-01
Release date:2017-05-03
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.9 Å)
Cite:Structural basis of inhibition of lipid-linked oligosaccharide flippase PglK by a conformational nanobody.
Sci Rep, 7, 2017
7LZO
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BU of 7lzo by Molmil
DHP B in complex with 2,4-Dibromophenol substrate
Descriptor: 2,4-bis(bromanyl)phenol, Dehaloperoxidase B, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Carey, L.M, Ghiladi, R.A.
Deposit date:2021-03-10
Release date:2022-03-16
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Mechanistic and Structural Studies of 2,4-dihalophenol: Bridging the Functional Gap between Reactivity and Inhibition in Dehaloperoxidase
To Be Published
7LZK
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BU of 7lzk by Molmil
DHP B in complex with 2,4-Dichlorophenol substrate
Descriptor: 2,4-dichlorophenol, Dehaloperoxidase B, GLYCEROL, ...
Authors:Carey, L.M, Ghiladi, R.A.
Deposit date:2021-03-10
Release date:2022-03-16
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Mechanistic and Structural Studies of 2,4-dihalophenol: Bridging the Functional Gap between Reactivity and Inhibition in Dehaloperoxidase
To Be Published
7M06
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BU of 7m06 by Molmil
Dihydrodipicolinate synthase (DHDPS) from C.jejuni, Y110F mutant with R,R-bislysine bound at the allosteric site at 2.7 Angstrom
Descriptor: (2R,5R)-2,5-diamino-2,5-bis(4-aminobutyl)hexanedioic acid, 1,2-ETHANEDIOL, 4-hydroxy-tetrahydrodipicolinate synthase, ...
Authors:Saran, S, Sanders, D.A.R.
Deposit date:2021-03-10
Release date:2022-03-16
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:B-FACTOR ANALYSIS SUGGEST THAT L-LYSINE AND R, R-BISLYSINE ALLOSTERICALLY INHIBIT Cj.DHDPS ENZYME BY DECREASING PROTEIN DYNAMICS
To Be Published
7LZN
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BU of 7lzn by Molmil
DHP B in complex with 2,4-Dichlorophenol substrate
Descriptor: 2,4-dichlorophenol, Dehaloperoxidase B, GLYCEROL, ...
Authors:Carey, L.M, Ghiladi, R.A.
Deposit date:2021-03-10
Release date:2022-03-16
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Mechanistic and Structural Studies of 2,4-dihalophenol: Bridging the Functional Gap between Reactivity and Inhibition in Dehaloperoxidase
To Be Published
7M0H
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BU of 7m0h by Molmil
DHP B in complex with 4-chlorophenol ligand
Descriptor: 4-chlorophenol, Dehaloperoxidase B, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Carey, L.M, Ghiladi, R.A.
Deposit date:2021-03-10
Release date:2022-08-31
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Mechanistic and Structural Studies of 2,4-dihalophenol: Bridging the Functional Gap between Reactivity and Inhibition in Dehaloperoxidase
To Be Published
7M0F
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BU of 7m0f by Molmil
DHP B in complex with 4-bromophenol ligand
Descriptor: 4-BROMOPHENOL, Dehaloperoxidase B, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Carey, L.M, Ghiladi, R.A.
Deposit date:2021-03-10
Release date:2022-08-31
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Mechanistic and Structural Studies of 2,4-dihalophenol: Bridging the Functional Gap between Reactivity and Inhibition in Dehaloperoxidase
To Be Published
7E64
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BU of 7e64 by Molmil
The crystal structure of peptidoglycan peptidase in complex with inhibitor 2-2
Descriptor: 2-[[(3S)-3-acetamido-4-[[(2R)-1-(oxidanylamino)-1-oxidanylidene-propan-2-yl]amino]-4-oxidanylidene-butyl]amino]ethanoic acid, Peptidase M23, ZINC ION
Authors:Choi, Y, Min, K.J, Yoon, H.J, Lee, H.H.
Deposit date:2021-02-21
Release date:2022-02-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure-based inhibitor design for reshaping bacterial morphology
Commun Biol, 5, 2022
7E67
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BU of 7e67 by Molmil
The crystal structure of peptidoglycan peptidase in complex with inhibitor 3-2
Descriptor: N-oxidanyl-2-[4-(4-sulfamoylphenyl)phenyl]ethanamide, Peptidase M23, ZINC ION
Authors:Choi, Y, Min, K.J, Yoon, H.J, Lee, H.H.
Deposit date:2021-02-21
Release date:2022-02-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Structure-based inhibitor design for reshaping bacterial morphology
Commun Biol, 5, 2022
7E61
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BU of 7e61 by Molmil
The crystal structure of peptidoglycan peptidase in complex with inhibitor 2
Descriptor: 2-[[(3S)-3-acetamido-4-[[(2R)-1-(oxidanylamino)-1-oxidanylidene-propan-2-yl]amino]-4-oxidanylidene-butyl]-(phenylmethyl)amino]ethanoic acid, Peptidase M23, ZINC ION
Authors:Min, K.J, Yoon, H.J, Choi, Y, Lee, H.H.
Deposit date:2021-02-21
Release date:2022-02-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure-based inhibitor design for reshaping bacterial morphology
Commun Biol, 5, 2022
7E63
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BU of 7e63 by Molmil
The crystal structure of peptidoglycan peptidase in complex with inhibitor 2-1
Descriptor: 2-[[(3S)-3-acetamido-4-[[(2R)-1-(oxidanylamino)-1-oxidanylidene-propan-2-yl]amino]-4-oxidanylidene-butyl]-(cyclopentylmethyl)amino]ethanoic acid, Peptidase M23, ZINC ION
Authors:Choi, Y, Min, K.J, Yoon, H.J, Lee, H.H.
Deposit date:2021-02-21
Release date:2022-02-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure-based inhibitor design for reshaping bacterial morphology
Commun Biol, 5, 2022

225681

數據於2024-10-02公開中

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