Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4BSK
DownloadVisualize
BU of 4bsk by Molmil
Crystal structure of VEGF-C in complex with VEGFR-3 domains D1-2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, VASCULAR ENDOTHELIAL GROWTH FACTOR C, ...
Authors:Leppanen, V.M, Tvorogov, D, Kisko, K, Prota, A.E, Jeltsch, M, Anisimov, A, Markovic-Mueller, S, Stuttfeld, E, Goldie, K.N, Ballmer-Hofer, K, Alitalo, K.
Deposit date:2013-06-10
Release date:2013-07-31
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (4.201 Å)
Cite:Structural and Mechanistic Insights Into Vegfr-3 Ligand Binding and Activation
Proc.Natl.Acad.Sci.USA, 110, 2013
4CG6
DownloadVisualize
BU of 4cg6 by Molmil
Cryo-em of the Sec61-complex bound to the 80s ribosome translating a membrane-inserting substrate
Descriptor: PEPTIDE, PROTEIN TRANSPORT PROTEIN SEC61 SUBUNIT ALPHA ISOFORM 1, PROTEIN TRANSPORT PROTEIN SEC61 SUBUNIT BETA, ...
Authors:Gogala, M, Becker, T, Beatrix, B, Barrio-Garcia, C, Berninghausen, O, Beckmann, R.
Deposit date:2013-11-21
Release date:2014-02-05
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (7.8 Å)
Cite:Structures of the Sec61 Complex Engaged in Nascent Peptide Translocation or Membrane Insertion.
Nature, 506, 2014
4CG7
DownloadVisualize
BU of 4cg7 by Molmil
Cryo-EM of the Sec61-complex bound to the idle 80S ribosome
Descriptor: PROTEIN TRANSPORT PROTEIN SEC61 SUBUNIT ALPHA ISOFORM 1, PROTEIN TRANSPORT PROTEIN SEC61 SUBUNIT GAMMA, TRANSPORT PROTEIN SEC61 SUBUNIT BETA
Authors:Gogala, M, Becker, T, Beatrix, B, Barrio-Garcia, C, Berninghausen, O, Beckmann, R.
Deposit date:2013-11-21
Release date:2014-02-05
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (6.9 Å)
Cite:Structures of the Sec61 Complex Engaged in Nascent Peptide Translocation or Membrane Insertion.
Nature, 506, 2014
1QPP
DownloadVisualize
BU of 1qpp by Molmil
CRYSTAL STRUCTURES OF SELF CAPPING PAPD CHAPERONE HOMODIMERS
Descriptor: PAPD CHAPERONE
Authors:Hung, D.L, Pinkner, J.S, Knight, S.D, Hultgren, S.J.
Deposit date:1999-05-28
Release date:1999-07-07
Last modified:2018-03-14
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural basis of chaperone self-capping in P pilus biogenesis.
Proc.Natl.Acad.Sci.USA, 96, 1999
1QPX
DownloadVisualize
BU of 1qpx by Molmil
CRYSTAL STRUCTURES OF SELF-CAPPING PAPD CHAPERONE HOMODIMERS
Descriptor: PAPD CHAPERONE
Authors:Hung, D.L, Pinkner, J.S, Knight, S.D, Hultgren, S.J.
Deposit date:1999-05-31
Release date:1999-07-07
Last modified:2022-12-21
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis of chaperone self-capping in P pilus biogenesis.
Proc.Natl.Acad.Sci.USA, 96, 1999
4CG5
DownloadVisualize
BU of 4cg5 by Molmil
Cryo-EM of the Sec61-complex bound to the 80S ribosome translating a secretory substrate
Descriptor: PROTEIN TRANSPORT PROTEIN SEC61 SUBUNIT ALPHA ISOFORM 1, PROTEIN TRANSPORT PROTEIN SEC61 SUBUNIT BETA, PROTEIN TRANSPORT PROTEIN SEC61 SUBUNIT GAMMA
Authors:Gogala, M, Becker, T, Beatrix, B, Barrio-Garcia, C, Berninghausen, O, Beckmann, R.
Deposit date:2013-11-21
Release date:2014-02-05
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (7.4 Å)
Cite:Structures of the Sec61 Complex Engaged in Nascent Peptide Translocation or Membrane Insertion.
Nature, 506, 2014
1PDK
DownloadVisualize
BU of 1pdk by Molmil
PAPD-PAPK CHAPERONE-PILUS SUBUNIT COMPLEX FROM E.COLI P PILUS
Descriptor: PROTEIN (CHAPERONE PROTEIN PAPD), PROTEIN (PROTEIN PAPK)
Authors:Fuetterer, K, Sauer, F.G, Hultgren, S.J, Waksman, G.
Deposit date:1999-03-29
Release date:1999-08-17
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis of chaperone function and pilus biogenesis.
Science, 285, 1999
3O5B
DownloadVisualize
BU of 3o5b by Molmil
Crystal structure of dimeric KlHxk1 in crystal form VII with glucose bound (open state)
Descriptor: Hexokinase, SULFATE ION, beta-D-glucopyranose
Authors:Kuettner, E.B, Kettner, K, Keim, A, Kriegel, T.M, Strater, N.
Deposit date:2010-07-28
Release date:2010-10-13
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Crystal Structure of Hexokinase KlHxk1 of Kluyveromyces lactis: A MOLECULAR BASIS FOR UNDERSTANDING THE CONTROL OF YEAST HEXOKINASE FUNCTIONS VIA COVALENT MODIFICATION AND OLIGOMERIZATION.
J.Biol.Chem., 285, 2010
6JJ4
DownloadVisualize
BU of 6jj4 by Molmil
Crystal structure of OsHXK6-apo form
Descriptor: Hexokinase-6
Authors:He, C, Wei, P, Chen, J, Wang, H, Wan, Y, Zhou, J, Zhu, Y, Huang, W, Yin, L.
Deposit date:2019-02-25
Release date:2019-07-03
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of OsHXK6-apo
To Be Published
6JJ9
DownloadVisualize
BU of 6jj9 by Molmil
Crystal structure of OsHXK6-Glc-ATP-Mg2+ complex
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Hexokinase-6, MAGNESIUM ION, ...
Authors:He, C, Wei, P, Chen, J, Wang, H, Wan, Y, Zhou, J, Zhu, Y, Huang, W, Yin, L.
Deposit date:2019-02-25
Release date:2019-07-03
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of OsHXK6-Glc-ATP-Mg2+ complex
To Be Published
2YHX
DownloadVisualize
BU of 2yhx by Molmil
SEQUENCING A PROTEIN BY X-RAY CRYSTALLOGRAPHY. II. REFINEMENT OF YEAST HEXOKINASE B CO-ORDINATES AND SEQUENCE AT 2.1 ANGSTROMS RESOLUTION
Descriptor: 2-deoxy-2-{[(2-methylphenyl)carbonyl]amino}-alpha-D-glucopyranose, HEXOKINASE B
Authors:Steitz, T.A, Anderson, C.M, Stenkamp, R.E.
Deposit date:1978-03-20
Release date:1978-05-23
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Sequencing a protein by x-ray crystallography. II. Refinement of yeast hexokinase B co-ordinates and sequence at 2.1 A resolution.
J.Mol.Biol., 123, 1978
2YXR
DownloadVisualize
BU of 2yxr by Molmil
The plug domain of the SecY protein stablizes the closed state of the translocation channel and maintains a membrane seal
Descriptor: Preprotein translocase secG subunit, Preprotein translocase subunit secE, Preprotein translocase subunit secY
Authors:Li, W, Schulman, S.
Deposit date:2007-04-27
Release date:2007-08-14
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:The plug domain of the SecY protein stabilizes the closed state of the translocation channel and maintains a membrane seal
Mol.Cell, 26, 2007
3O6W
DownloadVisualize
BU of 3o6w by Molmil
Crystal structure of monomeric KlHxk1 in crystal form VIII (open state)
Descriptor: GLYCEROL, Hexokinase, PHOSPHATE ION
Authors:Kuettner, E.B, Kettner, K, Keim, A, Kriegel, T.M, Strater, N.
Deposit date:2010-07-29
Release date:2010-10-13
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Crystal Structure of Hexokinase KlHxk1 of Kluyveromyces lactis: A MOLECULAR BASIS FOR UNDERSTANDING THE CONTROL OF YEAST HEXOKINASE FUNCTIONS VIA COVALENT MODIFICATION AND OLIGOMERIZATION.
J.Biol.Chem., 285, 2010
5AWW
DownloadVisualize
BU of 5aww by Molmil
Precise Resting State of Thermus thermophilus SecYEG
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Protein translocase subunit SecE, Protein translocase subunit SecY, ...
Authors:Tanaka, Y, Sugano, Y, Takemoto, M, Kusakizako, T, Kumazaki, K, Ishitani, R, Nureki, O, Tsukazaki, T.
Deposit date:2015-07-10
Release date:2015-11-25
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.724 Å)
Cite:Crystal Structures of SecYEG in Lipidic Cubic Phase Elucidate a Precise Resting and a Peptide-Bound State.
Cell Rep, 13, 2015
2WMP
DownloadVisualize
BU of 2wmp by Molmil
Structure of the E. coli chaperone PapD in complex with the pilin domain of the PapGII adhesin
Descriptor: CHAPERONE PROTEIN PAPD, PAPG PROTEIN
Authors:Ford, B.A, Verger, D, Elam, J.S, Dodson, K.W, Pinkner, J.S, Hultgren, S.J.
Deposit date:2009-07-02
Release date:2010-08-25
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of the Papd-Papgii Pilin Complex Reveals an Open and Flexible P5 Pocket.
J.Bacteriol., 194, 2012
3O4W
DownloadVisualize
BU of 3o4w by Molmil
Crystal structure of dimeric KlHxk1 in crystal form IV
Descriptor: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, GLYCEROL, Hexokinase, ...
Authors:Kuettner, E.B, Kettner, K, Keim, A, Kriegel, T.M, Strater, N.
Deposit date:2010-07-27
Release date:2010-10-13
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Crystal Structure of Hexokinase KlHxk1 of Kluyveromyces lactis: A MOLECULAR BASIS FOR UNDERSTANDING THE CONTROL OF YEAST HEXOKINASE FUNCTIONS VIA COVALENT MODIFICATION AND OLIGOMERIZATION.
J.Biol.Chem., 285, 2010
5CH4
DownloadVisualize
BU of 5ch4 by Molmil
Peptide-Bound State of Thermus thermophilus SecYEG
Descriptor: Protein translocase subunit SecE, Protein translocase subunit SecY, Putative preprotein translocase, ...
Authors:Tanaka, Y, Sugano, Y, Takemoto, M, Kusakizako, T, Kumazaki, K, Ishitani, R, Nureki, O, Tsukazaki, T.
Deposit date:2015-07-10
Release date:2015-11-25
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.64 Å)
Cite:Crystal Structures of SecYEG in Lipidic Cubic Phase Elucidate a Precise Resting and a Peptide-Bound State.
Cell Rep, 13, 2015
1N0L
DownloadVisualize
BU of 1n0l by Molmil
Crystal structure of the PapD chaperone (C-terminally 6x histidine-tagged) bound to the PapE pilus subunit (N-terminal-deleted) from uropathogenic E. coli
Descriptor: Chaperone protein PapD, mature Fimbrial protein PapE
Authors:Sauer, F.G, Pinkner, J.S, Waksman, G, Hultgren, S.J.
Deposit date:2002-10-14
Release date:2002-12-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Chaperone priming of pilus subunits facilitates a topological transition that drives fiber formation
Cell(Cambridge,Mass.), 111, 2002
2YXQ
DownloadVisualize
BU of 2yxq by Molmil
The plug domain of the SecY protein stablizes the closed state of the translocation channel and maintains a membrane seal
Descriptor: Preprotein translocase secG subunit, Preprotein translocase subunit secE, Preprotein translocase subunit secY
Authors:Li, W, Schulman, S.
Deposit date:2007-04-27
Release date:2007-08-14
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:The plug domain of the SecY protein stabilizes the closed state of the translocation channel and maintains a membrane seal
Mol.Cell, 26, 2007
2AKI
DownloadVisualize
BU of 2aki by Molmil
Normal mode-based flexible fitted coordinates of a translocating SecYEG protein-conducting channel into the cryo-EM map of a SecYEG-nascent chain-70S ribosome complex from E. coli
Descriptor: Preprotein translocase secE subunit, Preprotein translocase secY subunit, Protein-export membrane protein secG
Authors:Mitra, K, Schaffitzel, C, Shaikh, T, Tama, F, Jenni, S, Brooks III, C.L, Ban, N, Frank, J.
Deposit date:2005-08-03
Release date:2005-11-15
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (14.9 Å)
Cite:Structure of the E. coli protein-conducting channel bound to a translating ribosome.
Nature, 438, 2005
6KRJ
DownloadVisualize
BU of 6krj by Molmil
Crystal structure of Hexokinase
Descriptor: Phosphotransferase
Authors:Sun, M.F, Wang, Y.H, Liao, S.Q, Yuan, H.
Deposit date:2019-08-22
Release date:2020-09-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Crystal structure of Hexokinase
To Be Published
2AKH
DownloadVisualize
BU of 2akh by Molmil
Normal mode-based flexible fitted coordinates of a non-translocating SecYEG protein-conducting channel into the cryo-EM map of a SecYEG-nascent chain-70S ribosome complex from E. coli
Descriptor: Preprotein translocase secE subunit, Preprotein translocase secY subunit, Protein-export membrane protein secG
Authors:Mitra, K.M, Schaffitzel, C, Shaikh, T, Tama, F, Jenni, S, Brooks III, C.L, Ban, N, Frank, J.
Deposit date:2005-08-03
Release date:2005-11-15
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (14.9 Å)
Cite:Structure of the E. coli protein-conducting channel bound to a translating ribosome.
Nature, 438, 2005
6KSR
DownloadVisualize
BU of 6ksr by Molmil
Crystal structure of Hexokinase from Eimeria tenella
Descriptor: Phosphotransferase, alpha-D-galactopyranose
Authors:Yuan, H, Sun, M.F, Wang, Y.H, Liao, S.Q.
Deposit date:2019-08-25
Release date:2020-09-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Crystal structure of Hexokinase from Eimeria tenella
To Be Published
7JTH
DownloadVisualize
BU of 7jth by Molmil
Cryo-EM structure of unliganded octameric prenyltransferase domain of Phomopsis amygdali fusicoccadiene synthase
Descriptor: Fusicoccadiene synthase
Authors:Faylo, J.L, van Eeuwen, T, Murakami, K, Christianson, D.W.
Deposit date:2020-08-17
Release date:2021-04-28
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structural insight on assembly-line catalysis in terpene biosynthesis.
Nat Commun, 12, 2021
3Q48
DownloadVisualize
BU of 3q48 by Molmil
Crystal structure of Pseudomonas aeruginosa CupB2 chaperone
Descriptor: Chaperone CupB2
Authors:Cai, X, Wang, R, Filloux, A, Waksman, G, Meng, G.
Deposit date:2010-12-23
Release date:2011-02-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural and functional characterization of Pseudomonas aeruginosa CupB chaperones
Plos One, 6, 2011

224931

數據於2024-09-11公開中

PDB statisticsPDBj update infoContact PDBjnumon