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1MAJ
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SOLUTION STRUCTURE OF AN ISOLATED ANTIBODY VL DOMAIN
Descriptor: IGG2A-KAPPA 26-10 FV (LIGHT CHAIN)
Authors:Constantine, K.L, Friedrichs, M.S, Metzler, W.J, Wittekind, M, Hensley, P, Mueller, L.
Deposit date:1993-09-16
Release date:1994-01-31
Last modified:2024-10-30
Method:SOLUTION NMR
Cite:Solution structure of an isolated antibody VL domain.
J.Mol.Biol., 236, 1994
5F9O
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Crystal structure of broadly neutralizing VH1-46 germline-derived CD4-binding site-directed antibody CH235.09 in complex with HIV-1 clade A/E 93TH057 gp120
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CH235.09 Light chain, ...
Authors:Joyce, M.G, Mascola, J.R, Kwong, P.D.
Deposit date:2015-12-10
Release date:2016-03-16
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Maturation Pathway from Germline to Broad HIV-1 Neutralizer of a CD4-Mimic Antibody.
Cell, 165, 2016
7SEO
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BU of 7seo by Molmil
Crystal Structure of Caspase-3 with Peptide Inhibitor Ac-VDV(DAB)D-CHO
Descriptor: ACE-VAL-ASP-VAL-DAB-ASP, Caspase-3 subunit p12, Caspase-3 subunit p17
Authors:Fuller, J.L, Finzel, B.C.
Deposit date:2021-09-30
Release date:2022-01-05
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:Structure-Based Design and Biological Evaluation of Novel Caspase-2 Inhibitors Based on the Peptide AcVDVAD-CHO and the Caspase-2-Mediated Tau Cleavage Sequence YKPVD314.
Acs Pharmacol Transl Sci, 5, 2022
1MBQ
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Anionic Trypsin from Pacific Chum Salmon
Descriptor: BENZAMIDINE, CALCIUM ION, Trypsin
Authors:Toyota, E, Ng, K.K.S, Kuninaga, S, Sekizaki, H, Itoh, K, Tanizawa, K, James, M.N.G.
Deposit date:2002-08-03
Release date:2002-12-11
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure and Nucleotide Sequence of an Anionic Trypsin from Chum Salmon (Oncorhynchus keta) in Comparison with Atlantic Salmon (Salmo salar) and Bovine Trypsin
J.Mol.Biol., 324, 2002
9GPC
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BU of 9gpc by Molmil
The crystal structure of ManDH5 E303Q mutant at 1.4 Angstroms Resolution - a beta-D-Mannanase of GH5 family from Dictyoglomus thermophilium
Descriptor: DUF5060 domain-containing protein, GLYCEROL
Authors:Sivron, Y, Romano, A, Shoham, Y, Shoham, G.
Deposit date:2024-09-07
Release date:2025-09-17
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:The crystal structure of ManDH5 E303Q mutant at 1.4 Angstroms Resolution - a beta-D-Mannanase of GH5 family from Dictyoglomus thermophilium
To Be Published
9GNI
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NONO/SFPQ filament: composite structure
Descriptor: Non-POU domain-containing octamer-binding protein isoform X2, Splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated)
Authors:Rasmussen, T, Bottcher, B.
Deposit date:2024-09-03
Release date:2025-09-17
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:A filamentous scaffold for gene regulation
to be published
1MBZ
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BU of 1mbz by Molmil
BETA-LACTAM SYNTHETASE WITH TRAPPED INTERMEDIATE
Descriptor: ARGININE-N-METHYLCARBONYL PHOSPHORIC ACID 5'-ADENOSINE ESTER, BETA-LACTAM SYNTHETASE, GLYCEROL, ...
Authors:Miller, M.T, Bachmann, B.O, Townsend, C.A, Rosenzweig, A.C.
Deposit date:2002-08-04
Release date:2002-10-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.47 Å)
Cite:The catalytic cycle of beta -lactam synthetase observed by x-ray crystallographic snapshots
Proc.Natl.Acad.Sci.USA, 99, 2002
1M48
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Crystal Structure of Human IL-2 Complexed with (R)-N-[2-[1-(Aminoiminomethyl)-3-piperidinyl]-1-oxoethyl]-4-(phenylethynyl)-L-phenylalanine methyl ester
Descriptor: 2-[3-METHYL-4-(N-METHYL-GUANIDINO)-BUTYRYLAMINO]-3-(4-PHENYLETHYNYL-PHENYL)-PROPIONIC ACID METHYL ESTER, interleukin-2
Authors:Arkin, M.A, Randal, M, DeLano, W.L, Hyde, J, Luong, T.N, Oslob, J.D, Raphael, D.R, Taylor, L, Wang, J, McDowell, R.S, Wells, J.A, Braisted, A.C.
Deposit date:2002-07-02
Release date:2002-07-31
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Binding of small molecules to an adaptive protein-protein interface
Proc.Natl.Acad.Sci.USA, 100, 2003
9GOW
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Crystal structure of phosphorylated human IRE1a in complex with IA107
Descriptor: 3-[5-bromanyl-2-methyl-1-(phenylcarbonyl)indol-3-yl]propanoic acid, Serine/threonine-protein kinase/endoribonuclease IRE1
Authors:Liu, Y, Gasper, R, Wu, P.
Deposit date:2024-09-06
Release date:2025-09-17
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of phosphorylated human IRE1a in complex with IA107
To be published
1MCJ
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PRINCIPLES AND PITFALLS IN DESIGNING SITE DIRECTED PEPTIDE LIGANDS
Descriptor: ACETYL GROUP, AMINO GROUP, D-PHENYLALANINE, ...
Authors:Edmundson, A.B, Harris, D.L, Fan, Z.-C, Guddat, L.W.
Deposit date:1993-02-25
Release date:1994-01-31
Last modified:2025-03-26
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Principles and pitfalls in designing site-directed peptide ligands.
Proteins, 16, 1993
9GNH
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BU of 9gnh by Molmil
Cryo-EM structure of essential Mycoplasma pneumoniae lipoprotein Mpn444 homotrimer
Descriptor: Uncharacterized lipoprotein MG309 homolog
Authors:Manger, S, Keles, I.
Deposit date:2024-09-03
Release date:2025-09-17
Method:ELECTRON MICROSCOPY (5.4 Å)
Cite:Structural characterization of an essential lipoprotein of Mycoplasma pneumoniae
To Be Published
1MCW
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THREE-DIMENSIONAL STRUCTURE OF A HYBRID LIGHT CHAIN DIMER. PROTEIN ENGINEERING OF A BINDING CAVITY
Descriptor: IMMUNOGLOBULIN MCG (LIGHT CHAIN), IMMUNOGLOBULIN WEIR (LIGHT CHAIN)
Authors:Ely, K.R, Herron, J.N, Edmundson, A.B.
Deposit date:1989-05-09
Release date:1990-10-15
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Three-dimensional structure of a hybrid light chain dimer: protein engineering of a binding cavity.
Mol.Immunol., 27, 1990
7S6R
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BU of 7s6r by Molmil
Complex structure of Methane monooxygenase hydroxylase and regulatory subunit with H5A mutation
Descriptor: 1,2-ETHANEDIOL, BENZOIC ACID, FE (III) ION, ...
Authors:Johns, J.C, Banerjee, R, Semonis, M.M, Shi, K, Aihara, H, Lipscomb, J.D.
Deposit date:2021-09-14
Release date:2021-12-29
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:X-ray Crystal Structures of Methane Monooxygenase Hydroxylase Complexes with Variants of Its Regulatory Component: Correlations with Altered Reaction Cycle Dynamics.
Biochemistry, 61, 2022
1MDG
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BU of 1mdg by Molmil
An Alternating Antiparallel Octaplex in an RNA Crystal Structure
Descriptor: 5'-R(*UP*(BGM)GP*AP*GP*GP*U)-3', COBALT HEXAMMINE(III), SODIUM ION
Authors:Pan, B.C, Xiong, Y, Shi, K, Sundaralingam, M.
Deposit date:2002-08-07
Release date:2003-08-12
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:An Eight-Stranded Helical Fragment in RNA Crystal Structure: Implications for Tetraplex Interaction
Structure, 11, 2003
7S6S
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BU of 7s6s by Molmil
Complex structure of Methane monooxygenase hydroxylase and regulatory subunit DBL1
Descriptor: 1,2-ETHANEDIOL, BENZOIC ACID, FE (III) ION, ...
Authors:Johns, J.C, Banerjee, R, Semonis, M.M, Shi, K, Aihara, H, Lipscomb, J.D.
Deposit date:2021-09-14
Release date:2021-12-29
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:X-ray Crystal Structures of Methane Monooxygenase Hydroxylase Complexes with Variants of Its Regulatory Component: Correlations with Altered Reaction Cycle Dynamics.
Biochemistry, 61, 2022
9GNW
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Universal PSII assembly intermediate
Descriptor: (1~{S})-3,5,5-trimethyl-4-[(1~{E},3~{E},5~{E},7~{E},9~{E},11~{E},13~{E},15~{E},17~{E})-3,7,12,16-tetramethyl-18-[(4~{S})-2,6,6-trimethyl-4-oxidanyl-cyclohexen-1-yl]octadeca-1,3,5,7,9,11,13,15,17-nonaenyl]cyclohex-3-en-1-ol, (3R)-beta,beta-caroten-3-ol, 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, ...
Authors:Fadeeva, M, Klaiman, D, Nelson, N.
Deposit date:2024-09-04
Release date:2025-09-17
Method:ELECTRON MICROSCOPY (2.93 Å)
Cite:Universal PSII assembly intermediate
To Be Published
1M4J
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BU of 1m4j by Molmil
CRYSTAL STRUCTURE OF THE N-TERMINAL ADF-H DOMAIN OF MOUSE TWINFILIN ISOFORM-1
Descriptor: A6 gene product
Authors:Paavilainen, V.O, Merckel, M.C, Falck, S, Ojala, P.J, Pohl, E, Wilmanns, M, Lappalainen, P.
Deposit date:2002-07-03
Release date:2002-11-13
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural Conservation Between the Actin Monomer-binding Sites of Twinfilin and Actin-depolymerizing Factor (ADF)/Cofilin
J.Biol.Chem., 277, 2002
1M4V
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BU of 1m4v by Molmil
Crystal structure of SET3, a superantigen-like protein from Staphylococcus aureus
Descriptor: SET3, superantigen-like protein
Authors:Arcus, V.L, Langley, R, Proft, T, Fraser, J.D, Baker, E.N.
Deposit date:2002-07-05
Release date:2002-07-17
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The three-dimensional structure of a superantigen-like protein, SET3, from a pathogenicity island of the Staphylococcus aureus genome
J.Biol.Chem., 277, 2002
9GRW
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BU of 9grw by Molmil
Structure of Heparinase I from Bacteroides eggerthii in complex with calcium cofactor
Descriptor: ACETATE ION, CALCIUM ION, Heparin lyase I, ...
Authors:Mycroft-West, C, Wu, L.
Deposit date:2024-09-12
Release date:2025-09-24
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Bacteroides eggerthii heparin lyase I liberates the rare delta-GlcA(alpha1->4)Glc3,6,N-sulphated disaccharide motif contained within the pentasaccharide of the clinical anticoagulant fondaparinux sodium
To Be Published
9GNU
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Tubulin in complex with a dioxane analog of zampanolide
Descriptor: (2Z,4E)-N-((S)-((1R,2E,5S,8E,10Z,14E,17S)-3,11-dimethyl-7,13-dioxo-6,19,21-trioxabicyclo[15.3.1]henicosa-2,8,10,14-tetraen-5-yl)(hydroxy)methyl)hexa-2,4-dienamide, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, ...
Authors:Oliva, M.A, Diaz, J.F, Altmann, K.H.
Deposit date:2024-09-04
Release date:2025-09-17
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Tubulin in complex with a dioxane analog of zampanolide
To Be Published
7S56
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Sortase A from Streptococcus agalactiae, residues 79-247
Descriptor: Class A sortase
Authors:Gao, M, Kodama, H.M, Antos, J.M, Amacher, J.F.
Deposit date:2021-09-09
Release date:2022-01-12
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural and biochemical analyses of selectivity determinants in chimeric Streptococcus Class A sortase enzymes.
Protein Sci., 31, 2022
1M57
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Structure of cytochrome c oxidase from Rhodobacter sphaeroides (EQ(I-286) mutant))
Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, CALCIUM ION, COPPER (II) ION, ...
Authors:Svensson-Ek, M, Abramson, J, Larsson, G, Tornroth, S, Brezezinski, P, Iwata, S.
Deposit date:2002-07-08
Release date:2002-08-28
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (3 Å)
Cite:The X-ray crystal structures of wild-type and EQ(I-286) mutant cytochrome c oxidases from Rhodobacter sphaeroides.
J.Mol.Biol., 321, 2002
2PE8
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BU of 2pe8 by Molmil
Crystal structure of the UHM domain of human SPF45 (free form)
Descriptor: Splicing factor 45
Authors:Corsini, L, Basquin, J, Hothorn, M, Sattler, M.
Deposit date:2007-04-02
Release date:2007-06-26
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:U2AF-homology motif interactions are required for alternative splicing regulation by SPF45.
Nat.Struct.Mol.Biol., 14, 2007
1MDX
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BU of 1mdx by Molmil
Crystal structure of ArnB transferase with pyridoxal 5' phosphate
Descriptor: 2-OXOGLUTARIC ACID, GLYCEROL, UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase
Authors:Noland, B.W, Newman, J.M, Hendle, J, Badger, J, Christopher, J.A, Tresser, J, Buchanan, M.D, Wright, T.A, Rutter, M.E, Sanderson, W.E, Muller-Dieckmann, H.-J, Gajiwala, K.S, Sauder, J.M, Buchanan, S.G.
Deposit date:2002-08-07
Release date:2002-12-11
Last modified:2024-12-25
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Structural studies of Salmonella typhimurium ArnB (PmrH) aminotransferase: A 4-amino-4-deoxy-L-arabinose lipopolysaccharide modifying enzyme
Structure, 10, 2002
1MEA
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BU of 1mea by Molmil
METHIONYL-TRNA SYNTHETASE ZINC BINDING DOMAIN. 3D STRUCTURE AND HOMOLOGY WITH RUBREDOXIN AND GAG RETROVIRAL PROTEINS
Descriptor: METHIONYL-tRNA SYNTHETASE, ZINC ION
Authors:Fourmy, D, Dardel, F.
Deposit date:1992-11-09
Release date:1993-10-31
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Methionyl-tRNA synthetase zinc binding domain. Three-dimensional structure and homology with rubredoxin and gag retroviral proteins.
J.Mol.Biol., 231, 1993

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數據於2025-10-29公開中

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