Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2Y5S
DownloadVisualize
BU of 2y5s by Molmil
Crystal structure of Burkholderia cenocepacia dihydropteroate synthase complexed with 7,8-dihydropteroate.
Descriptor: 1,2-ETHANEDIOL, 7,8-DIHYDROPTEROATE, CHLORIDE ION, ...
Authors:Morgan, R.E, Batot, G.O, Dement, J.M, Rao, V.A, Eadsforth, T.C, Hunter, W.N.
Deposit date:2011-01-17
Release date:2011-01-26
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal Structures of Burkholderia Cenocepacia Dihydropteroate Synthase in the Apo-Form and Complexed with the Product 7,8-Dihydropteroate.
Bmc Struct.Biol., 11, 2011
2Y4X
DownloadVisualize
BU of 2y4x by Molmil
Structure of a domain from the type IV pilus biogenesis lipoprotein PilP, from Pseudomonas aeruginosa PA01
Descriptor: PILP PROTEIN
Authors:Derrick, J.P, Berry, J.
Deposit date:2011-01-11
Release date:2012-01-18
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of a Domain from the Type Iv Pilus Biogenesis Lipoprotein Pilp
To be Published
2Y56
DownloadVisualize
BU of 2y56 by Molmil
Fragment growing induces conformational changes in acetylcholine- binding protein: A structural and thermodynamic analysis - (Compound 3)
Descriptor: CHLORIDE ION, GLYCEROL, SOLUBLE ACETYLCHOLINE RECEPTOR, ...
Authors:Rucktooa, P, Edink, E, deEsch, I.J.P, Sixma, T.K.
Deposit date:2011-01-12
Release date:2011-06-15
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.59 Å)
Cite:Fragment Growing Induces Conformational Changes in Acetylcholine-Binding Protein: A Structural and Thermodynamic Analysis.
J.Am.Chem.Soc., 133, 2011
2Y40
DownloadVisualize
BU of 2y40 by Molmil
Structure of Isopropylmalate dehydrogenase from Thermus thermophilus - complex with Mn
Descriptor: 3-ISOPROPYLMALATE DEHYDROGENASE, MANGANESE (II) ION
Authors:Graczer, E, merlin, A, Singh, R.K, Manikandan, K, Zavodsky, P, Weiss, M.S, Vas, M.
Deposit date:2011-01-04
Release date:2011-01-19
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Atomic Level Description of the Domain Closure in a Dimeric Enzyme: Thermus Thermophilus 3-Isopropylmalate Dehydrogenase.
Mol.Biosyst., 7, 2011
5D1Y
DownloadVisualize
BU of 5d1y by Molmil
Low resolution crystal structure of human ribonucleotide reductase alpha6 hexamer in complex with dATP
Descriptor: Ribonucleoside-diphosphate reductase large subunit
Authors:Ando, N, Li, H, Brignole, E.J, Thompson, S, McLaughlin, M.I, Page, J, Asturias, F, Stubbe, J, Drennan, C.L.
Deposit date:2015-08-04
Release date:2016-01-20
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (9.005 Å)
Cite:Allosteric Inhibition of Human Ribonucleotide Reductase by dATP Entails the Stabilization of a Hexamer.
Biochemistry, 55, 2016
2Y4U
DownloadVisualize
BU of 2y4u by Molmil
Crystal structure of human P58(IPK) in space group P312
Descriptor: DNAJ HOMOLOG SUBFAMILY C MEMBER 3
Authors:Svard, M, Biterova, E.I, Bourhis, J.-M, Guy, J.E.
Deposit date:2011-01-10
Release date:2011-08-10
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:The Crystal Structure of the Human Co-Chaperone P58Ipk
Plos One, 6, 2011
2Y5G
DownloadVisualize
BU of 2y5g by Molmil
FACTOR XA - CATION INHIBITOR COMPLEX
Descriptor: 3-[(3AS,4R,5S,8AS,8BR)-4-[5-(5-CHLOROTHIOPHEN-2-YL)-1,3-OXAZOL-2-YL]-1,3-DIOXO-4,6,7,8,8A,8B-HEXAHYDRO-3AH-PYRROLO[3,4-A]PYRROLIZIN-2-YL]PROPYL-TRIMETHYL-AZANIUM, ACTIVATED FACTOR XA HEAVY CHAIN, FACTOR X LIGHT CHAIN, ...
Authors:Banner, D.W, Salonen, L.M, Holland, M.C, Haap, W, Benz, J, Diederich, F.
Deposit date:2011-01-13
Release date:2011-12-28
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.29 Å)
Cite:Molecular Recognition at the Active Site of Factor Xa: Cation-Pi Interactions, Stacking on Planar Peptide Surfaces, and Replacement of Structural Water.
Chemistry, 18, 2012
8RDA
DownloadVisualize
BU of 8rda by Molmil
Crystal structure of Haemophilus influenzae type b (Hib) DP2 oligosaccharide bound to Fab CA4
Descriptor: 1,2-ETHANEDIOL, Fab CA4 H chain, Fab CA4 L chain, ...
Authors:Nonne, F, Dello Iacono, L.
Deposit date:2023-12-07
Release date:2024-05-15
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:A Multidisciplinary Structural Approach to the Identification of the Haemophilus influenzae Type b Capsular Polysaccharide Protective Epitope.
Acs Cent.Sci., 10, 2024
2XRZ
DownloadVisualize
BU of 2xrz by Molmil
X-ray structure of archaeal class II CPD photolyase from Methanosarcina mazei in complex with intact CPD-lesion
Descriptor: ACETATE ION, COUNTERSTRAND-OLIGONUCLEOTIDE, CPD-COMPRISING OLIGONUCLEOTIDE, ...
Authors:Kiontke, S, Geisselbrecht, Y, Pokorny, R, Carell, T, Batschauer, A, Essen, L.O.
Deposit date:2010-09-24
Release date:2011-09-14
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structures of an Archaeal Class II DNA Photolyase and its Complex with Uv-Damaged Duplex DNA.
Embo J., 30, 2011
8SDO
DownloadVisualize
BU of 8sdo by Molmil
ATAD2 bromodomain in complex with "oncohistone" mutation H4S1CK5ac (res 1-15) ligand
Descriptor: ATPase family AAA domain-containing protein 2, Histone H4
Authors:Malone, K.L, Nix, J.C, Glass, K.C.
Deposit date:2023-04-07
Release date:2024-06-05
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Impact of Combinatorial Histone Modifications on Acetyllysine Recognition by the ATAD2 and ATAD2B Bromodomains.
J.Med.Chem., 67, 2024
8RND
DownloadVisualize
BU of 8rnd by Molmil
Cathepsin S in complex with NNPI-C10 inhibitor
Descriptor: 1,2-ETHANEDIOL, Cathepsin S, DI(HYDROXYETHYL)ETHER, ...
Authors:Petruzzella, A, Lau, K, Pojer, F, Oricchio, E.
Deposit date:2024-01-09
Release date:2024-06-05
Last modified:2024-06-12
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Antibody-peptide conjugates deliver covalent inhibitors blocking oncogenic cathepsins.
Nat.Chem.Biol., 2024
2Y07
DownloadVisualize
BU of 2y07 by Molmil
CRYSTAL STRUCTURE ANALYSIS OF THE ANTI-(4-HYDROXY-3-NITROPHENYL) - ACETYL MURINE GERMLINE MONOCLONAL ANTIBODY BBE6.12H3 FAB FRAGMENT IN COMPLEX WITH A PHAGE DISPLAY DERIVED DODECAPEPTIDE PPYPAWHAPGNI
Descriptor: ANTI-NP MURINE GERMLINE MONOCLONAL ANTIBODY BBE6.12H3, HEAVY CHAIN, LIGHT CHAIN, ...
Authors:Khan, T, Salunke, D.M.
Deposit date:2010-11-30
Release date:2011-12-28
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural Elucidation of the Mechanistic Basis of Degeneracy in the Primary Humoral Response.
J.Immunol., 188, 2012
3UR5
DownloadVisualize
BU of 3ur5 by Molmil
Crystal Structure of PTE mutant K185R/I274N
Descriptor: COBALT (II) ION, DIETHYL HYDROGEN PHOSPHATE, Parathion hydrolase
Authors:Tsai, P, Fox, N.G, Li, Y, Barondeau, D.P, Raushel, F.M.
Deposit date:2011-11-21
Release date:2012-08-01
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Enzymes for the homeland defense: optimizing phosphotriesterase for the hydrolysis of organophosphate nerve agents.
Biochemistry, 51, 2012
8SDX
DownloadVisualize
BU of 8sdx by Molmil
ATAD2B bromodomain in complex with histone H4 acetylated at lysine 5 with Serine 1 mutation to Cysteine
Descriptor: ATPase family AAA domain-containing protein 2B, SULFATE ION, histone H4S1CK5ac
Authors:Phillips, M, Montgomery, C, Nix, J.C, Glass, K.C.
Deposit date:2023-04-07
Release date:2024-06-05
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Impact of Combinatorial Histone Modifications on Acetyllysine Recognition by the ATAD2 and ATAD2B Bromodomains.
J.Med.Chem., 67, 2024
2Y36
DownloadVisualize
BU of 2y36 by Molmil
Crystal structure analysis of the anti-(4-hydroxy-3-nitrophenyl)- acetyl murine germline antibody BBE6.12H3 Fab fragment in complex with a phage display derived dodecapeptide DLWTTAIPTIPS
Descriptor: ANTI-NP MURINE GERMLINE MONOCLONAL ANTIBODY BBE6.12H3, DODECAPEPTIDE (DLWTTAIPTIPS)
Authors:Khan, T, Salunke, D.M.
Deposit date:2010-12-18
Release date:2011-12-28
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural Elucidation of the Mechanistic Basis of Degeneracy in the Primary Humoral Response.
J.Immunol., 188, 2012
2XZQ
DownloadVisualize
BU of 2xzq by Molmil
CRYSTAL STRUCTURE ANALYSIS OF THE ANTI-(4-HYDROXY-3-NITROPHENYL)- ACETYL MURINE GERMLINE MONOCLONAL ANTIBODY BBE6.12H3 FAB FRAGMENT IN COMPLEX WITH A PHAGE DISPLAY DERIVED DODECAPEPTIDE YQLRPNAETLRF
Descriptor: ANTI-NP MURINE GERMLINE MONOCLONAL ANTIBODY BBE6.12H3, HEAVY CHAIN, LIGHT CHAIN, ...
Authors:Khan, T, Salunke, D.M.
Deposit date:2010-12-01
Release date:2011-12-28
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural Elucidation of the Mechanistic Basis of Degeneracy in the Primary Humoral Response.
J.Immunol., 188, 2012
3URQ
DownloadVisualize
BU of 3urq by Molmil
Crystal Structure of PTE mutant H254G/H257W/L303T/M317L/I106C/F132I/L271I/K185R/I274N/A80V/R67H with cyclohexyl methylphosphonate inhibitor
Descriptor: COBALT (II) ION, IMIDAZOLE, Parathion hydrolase, ...
Authors:Tsai, P, Fox, N.G, Li, Y, Barondeau, D.P, Raushel, F.M.
Deposit date:2011-11-22
Release date:2012-08-01
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Enzymes for the homeland defense: optimizing phosphotriesterase for the hydrolysis of organophosphate nerve agents.
Biochemistry, 51, 2012
8RXH
DownloadVisualize
BU of 8rxh by Molmil
CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN
Descriptor: (2S)-2-[2-[4-[[(2R,3S,4S)-3-acetyloxy-4-oxidanyl-pyrrolidin-2-yl]methyl]phenoxy]ethanoylamino]-6-azanyl-hexanoic acid, 40S ribosomal protein S12, 40S ribosomal protein S14, ...
Authors:Rajan, K.S, Yonath, A.
Deposit date:2024-02-07
Release date:2024-05-15
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (2.93 Å)
Cite:Structural and mechanistic insights into the function of Leishmania ribosome lacking a single pseudouridine modification.
Cell Rep, 43, 2024
8RDU
DownloadVisualize
BU of 8rdu by Molmil
Conformational Landscape of the Type V-K CRISPR-associated TransposonIntegration Assembly CAST V-K composite map
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, LE, MAGNESIUM ION, ...
Authors:Tenjo-Castano, F, Mesa, P, Montoya, G.
Deposit date:2023-12-08
Release date:2024-06-19
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (2.3 Å)
Cite:Conformational landscape of the type V-K CRISPR-associated transposon integration assembly.
Mol.Cell, 84, 2024
2XD2
DownloadVisualize
BU of 2xd2 by Molmil
The crystal structure of MalX from Streptococcus pneumoniae
Descriptor: MALTOSE/MALTODEXTRIN-BINDING PROTEIN
Authors:Abbott, D.W, Higgins, M.A, Hyrnuik, S, Pluvinage, B, Lammerts van Bueren, A, Boraston, A.B.
Deposit date:2010-04-28
Release date:2010-06-09
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The Molecular Basis of Glycogen Breakdown and Transport in Streptococcus Pneumoniae.
Mol.Microbiol., 77, 2010
2Y3L
DownloadVisualize
BU of 2y3l by Molmil
Structure of segment MVGGVVIA from the amyloid-beta peptide (Ab, residues 35-42), alternate polymorph 2
Descriptor: AMYLOID BETA A4 PROTEIN
Authors:Colletier, J.P, Laganowsky, A, Sawaya, M.R, Eisenberg, D.
Deposit date:2010-12-21
Release date:2011-11-02
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Molecular Basis for Amyloid-{Beta} Polymorphism.
Proc.Natl.Acad.Sci.USA, 108, 2011
8RUH
DownloadVisualize
BU of 8ruh by Molmil
Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Mg2+ and 5'-exon
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 5'-exon, Domains 1-5, ...
Authors:Silvestri, I, Marcia, M.
Deposit date:2024-01-30
Release date:2024-06-19
Last modified:2024-07-03
Method:X-RAY DIFFRACTION (4.55 Å)
Cite:Targeting the conserved active site of splicing machines with specific and selective small molecule modulators.
Nat Commun, 15, 2024
8RUI
DownloadVisualize
BU of 8rui by Molmil
Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Mg2+, 5'-exon, and intronistat B after 1h soaking
Descriptor: Domains 1-5, MAGNESIUM ION, POTASSIUM ION, ...
Authors:Silvestri, I, Marcia, M.
Deposit date:2024-01-30
Release date:2024-06-19
Last modified:2024-07-03
Method:X-RAY DIFFRACTION (3.31 Å)
Cite:Targeting the conserved active site of splicing machines with specific and selective small molecule modulators.
Nat Commun, 15, 2024
8RZ6
DownloadVisualize
BU of 8rz6 by Molmil
SeMet derivative structure of the condensation domain TomBC from the Tomaymycin non-ribosomal peptide synthetase
Descriptor: FORMIC ACID, GLYCEROL, POTASSIUM ION, ...
Authors:Karanth, M, Schmelz, S, Kirkpatrick, J, Krausze, J, Scrima, A, Carlomagno, T.
Deposit date:2024-02-12
Release date:2024-06-26
Last modified:2024-07-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The specificity of intermodular recognition in a prototypical nonribosomal peptide synthetase depends on an adaptor domain.
Sci Adv, 10, 2024
8S47
DownloadVisualize
BU of 8s47 by Molmil
CdaA-D07 complex
Descriptor: CHLORIDE ION, Diadenylate cyclase, N-(pyridin-2-yl)-2-(1,3,5-trimethyl-1H-pyrazol-4-yl)acetamide
Authors:Neumann, P, Ficner, R.
Deposit date:2024-02-21
Release date:2024-06-19
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:CdaA-D07 complex
To Be Published

222415

數據於2024-07-10公開中

PDB statisticsPDBj update infoContact PDBjnumon