Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5D7Y
DownloadVisualize
BU of 5d7y by Molmil
Crystal structure of Hepatitis B virus T=4 capsid in complex with the allosteric modulator HAP18
Descriptor: Capsid protein, methyl (4R)-4-(2-chloro-4-fluorophenyl)-6-{[4-(3-hydroxypenta-1,4-diyn-3-yl)piperidin-1-yl]methyl}-2-(pyridin-2-yl)-1,4-dihydropyrimidine-5-carboxylate
Authors:Venkatakrishnan, B, Katen, S.P, Zlotnick, A.
Deposit date:2015-08-14
Release date:2016-02-17
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.894 Å)
Cite:Hepatitis B Virus Capsids Have Diverse Structural Responses to Small-Molecule Ligands Bound to the Heteroaryldihydropyrimidine Pocket.
J.Virol., 90, 2016
1CR7
DownloadVisualize
BU of 1cr7 by Molmil
PEANUT LECTIN-LACTOSE COMPLEX MONOCLINIC FORM
Descriptor: CALCIUM ION, LECTIN, MANGANESE (II) ION, ...
Authors:Ravishankar, R, Suguna, K, Surolia, A, Vijayan, M.
Deposit date:1999-08-14
Release date:2001-04-21
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structures of the peanut lectin-lactose complex at acidic pH: retention of unusual quaternary structure, empty and carbohydrate bound combining sites, molecular mimicry and crystal packing directed by interactions at the combining site.
Proteins, 43, 2001
5D38
DownloadVisualize
BU of 5d38 by Molmil
Directed evolutionary changes in Kemp Eliminase KE07 - Crystal 17 round 7-2
Descriptor: De novo kemp eliminase KE07 round 7-2
Authors:Jackson, C.J, Hong, N.-S, Carr, P.D.
Deposit date:2015-08-06
Release date:2016-09-07
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.427 Å)
Cite:Directed evolutionary changes in Kemp Eliminase KE07 - Crystal 17 round 7-2
To Be Published
6Y2S
DownloadVisualize
BU of 6y2s by Molmil
Escherichia coli R318A RnlA endoribonuclease (single alanine mutant of RnlA)
Descriptor: mRNA endoribonuclease toxin LS
Authors:Garcia-Rodriguez, G, Loris, R.
Deposit date:2020-02-17
Release date:2021-03-31
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.79 Å)
Cite:Quaternary structure changes control ribonuclease activity of RnlA toxin.
To Be Published
4PL4
DownloadVisualize
BU of 4pl4 by Molmil
Crystal structure of murine IRE1 in complex with OICR464 inhibitor
Descriptor: 2,5,8,11,14,17,20,23,26,29,32,35,38,41,44,47,50,53,56,59,62,65,68,71,74,77,80-HEPTACOSAOXADOOCTACONTAN-82-OL, 2-methoxy-6-methyl-4-(4-methyl-3,4-dihydro-2H-1,4-benzoxazin-7-yl)phenol, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Sanches, M, Duffy, N, Talukdar, M, Thevakumaran, N, Chiovitti, D, Al-awar, R, Patterson, J.B, Sicheri, F.
Deposit date:2014-05-16
Release date:2014-09-03
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure and mechanism of action of the hydroxy-aryl-aldehyde class of IRE1 endoribonuclease inhibitors.
Nat Commun, 5, 2014
3QHT
DownloadVisualize
BU of 3qht by Molmil
Crystal Structure of the Monobody ySMB-1 bound to yeast SUMO
Descriptor: GLYCEROL, Monobody ySMB-1, Ubiquitin-like protein SMT3
Authors:Koide, S, Gilbreth, R.N.
Deposit date:2011-01-26
Release date:2011-05-11
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Isoform-specific monobody inhibitors of small ubiquitin-related modifiers engineered using structure-guided library design.
Proc.Natl.Acad.Sci.USA, 108, 2011
4KA7
DownloadVisualize
BU of 4ka7 by Molmil
Structure of Organellar OligoPeptidase (E572Q) in complex with an endogenous substrate
Descriptor: CHLORIDE ION, GLYCEROL, Oligopeptidase A, ...
Authors:Berntsson, R.P.-A, Kmiec, B, Teixeira, P.F, Svensson, L.M, Bakali, A, Glaser, E, Stenmark, P.
Deposit date:2013-04-22
Release date:2013-09-18
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Organellar oligopeptidase (OOP) provides a complementary pathway for targeting peptide degradation in mitochondria and chloroplasts.
Proc. Natl. Acad. Sci. U.S.A., 110, 2013
4KC7
DownloadVisualize
BU of 4kc7 by Molmil
Crystal Structure of Endo-1,5-alpha-L-arabinanase from Thermotoga petrophila RKU-1
Descriptor: CALCIUM ION, DI(HYDROXYETHYL)ETHER, Glycoside hydrolase, ...
Authors:Nascimento, A.F.Z, Polo, C.C, Santos, C.R, Costa, M.C.M.F, Mesa, A.N, Prade, R.A, Ruller, R, Squina, F.M, Murakami, M.T.
Deposit date:2013-04-24
Release date:2014-02-05
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Mechanistic strategies for catalysis adopted by evolutionary distinct family 43 arabinanases.
J.Biol.Chem., 289, 2014
2FEK
DownloadVisualize
BU of 2fek by Molmil
Structure of a protein tyrosine phosphatase
Descriptor: Low molecular weight protein-tyrosine-phosphatase wzb
Authors:Lescop, E, Jin, C.
Deposit date:2005-12-16
Release date:2006-05-09
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:The solution structure of Escherichia coli Wzb reveals a novel substrate recognition mechanism of prokaryotic low molecular weight protein-tyrosine phosphatases
J.Biol.Chem., 281, 2006
2A0U
DownloadVisualize
BU of 2a0u by Molmil
Crystal structure of the eukaryotic initiation factor 2B from Leishmania major at 2.1 A resolution
Descriptor: SULFATE ION, initiation factor 2B
Authors:Bosch, J, Hol, W.G.J, Structural Genomics of Pathogenic Protozoa Consortium (SGPP)
Deposit date:2005-06-17
Release date:2005-08-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of the eukaryotic initiation factor 2B from Leishmania major at 2.1 A resolution
To be Published
4FN4
DownloadVisualize
BU of 4fn4 by Molmil
short-chain NAD(H)-dependent dehydrogenase/reductase from Sulfolobus acidocaldarius
Descriptor: GLYCEROL, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SULFATE ION, ...
Authors:Pennacchio, A, Sannino, V, Sorrentino, G, Rossi, M, Raia, C.A, Esposito, L.
Deposit date:2012-06-19
Release date:2012-08-15
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Biochemical and structural characterization of recombinant short-chain NAD(H)-dependent dehydrogenase/reductase from Sulfolobus acidocaldarius highly enantioselective on diaryl diketone benzil.
Appl.Microbiol.Biotechnol., 97, 2013
5A8Q
DownloadVisualize
BU of 5a8q by Molmil
Crystal structure beta-glucanase SdGluc5_26A from Saccharophagus degradans in complex with tetrasaccharide A obtained by soaking
Descriptor: CHLORIDE ION, GLYCEROL, MAGNESIUM ION, ...
Authors:Sulzenbacher, G, Lafond, M, Freyd, T, Henrissat, B, Coutinho, R.M, Berrin, J.G, Garron, M.L.
Deposit date:2015-07-16
Release date:2016-01-20
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The Quaternary Structure of a Glycoside Hydrolase Dictates Specificity Towards Beta-Glucans
J.Biol.Chem., 291, 2016
6QXU
DownloadVisualize
BU of 6qxu by Molmil
Human TNKS1 in complex with 6,8-Difluoro-2-[4-(1-hydroxy-1-methyl-ethyl)-phenyl]-3H-quinazolin-4-one
Descriptor: 6,8-bis(fluoranyl)-2-[4-(2-oxidanylpropan-2-yl)phenyl]-3~{H}-quinazolin-4-one, BETA-MERCAPTOETHANOL, Poly [ADP-ribose] polymerase tankyrase-1, ...
Authors:Musil, D, Lehmann, D, Buchstaller, H.-P.
Deposit date:2019-03-08
Release date:2019-08-14
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Discovery and Optimization of 2-Arylquinazolin-4-ones into a Potent and Selective Tankyrase Inhibitor Modulating Wnt Pathway Activity.
J.Med.Chem., 62, 2019
5A8P
DownloadVisualize
BU of 5a8p by Molmil
Crystal structure beta-glucanase SdGluc5_26A from Saccharophagus degradans in complex with tetrasaccharide B
Descriptor: CHLORIDE ION, GLYCEROL, MAGNESIUM ION, ...
Authors:Sulzenbacher, G, Lafond, M, Freyd, T, Henrissat, B, Coutinho, R.M, Berrin, J.G, Garron, M.L.
Deposit date:2015-07-16
Release date:2016-01-20
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The Quaternary Structure of a Glycoside Hydrolase Dictates Specificity Towards Beta-Glucans
J.Biol.Chem., 291, 2016
5AMB
DownloadVisualize
BU of 5amb by Molmil
Crystal structure of the Angiotensin-1 converting enzyme N-domain in complex with amyloid-beta 35-42
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, AMYLOID BETA A4 PROTEIN, ANGIOTENSIN-CONVERTING ENZYME, ...
Authors:Masuyer, G, Larmuth, K.M, Douglas, R.G, Sturrock, E.D, Acharya, K.R.
Deposit date:2015-03-10
Release date:2016-01-13
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:The Kinetic and Structural Characterisation of Amyloid-Beta Metabolism by Human Angiotensin-1- Converting Enzyme (Ace)
FEBS J., 283, 2016
5ARL
DownloadVisualize
BU of 5arl by Molmil
crystal structure of porcine RNase 4 D80A mutant in complex with dCMP
Descriptor: 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE, RIBONUCLEASE 4
Authors:Liang, S, Acharya, K.R.
Deposit date:2015-09-25
Release date:2016-01-20
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Structural Basis of Substrate Specificity in Porcine Rnase 4.
FEBS J., 283, 2016
5AMC
DownloadVisualize
BU of 5amc by Molmil
Crystal structure of the Angiotensin-1 converting enzyme N-domain in complex with amyloid-beta fluorogenic fragment 4-10
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ANGIOTENSIN-CONVERTING ENZYME, CHLORIDE ION, ...
Authors:Masuyer, G, Larmuth, K.M, Douglas, R.G, Sturrock, E.D, Acharya, K.R.
Deposit date:2015-03-10
Release date:2016-01-13
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:The Kinetic and Structural Characterisation of Amyloid-Beta Metabolism by Human Angiotensin-1- Converting Enzyme (Ace)
FEBS J., 283, 2016
3GAL
DownloadVisualize
BU of 3gal by Molmil
CRYSTAL STRUCTURE OF HUMAN GALECTIN-7 IN COMPLEX WITH GALACTOSAMINE
Descriptor: 2-amino-2-deoxy-beta-D-galactopyranose, GALECTIN-7
Authors:Leonidas, D.D, Acharya, K.R.
Deposit date:1998-07-13
Release date:1998-11-04
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis for the recognition of carbohydrates by human galectin-7.
Biochemistry, 37, 1998
3RP7
DownloadVisualize
BU of 3rp7 by Molmil
Crystal Structure of Klebsiella pneumoniae HpxO complexed with FAD and uric acid
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, URIC ACID, flavoprotein monooxygenase
Authors:Hicks, K.A, O'Leary, S.E, Begley, T.P, Ealick, S.E.
Deposit date:2011-04-26
Release date:2012-05-16
Last modified:2013-02-06
Method:X-RAY DIFFRACTION (2.042 Å)
Cite:Structural and Mechanistic Studies of HpxO, a Novel Flavin Adenine Dinucleotide-Dependent Urate Oxidase from Klebsiella pneumoniae.
Biochemistry, 52, 2013
5BNF
DownloadVisualize
BU of 5bnf by Molmil
Apo structure of porcine CD38
Descriptor: Uncharacterized protein
Authors:Ting, K.Y, Leung, C.P.F, Graeff, R.M, Lee, H.C, Hao, Q, Kotaka, M.
Deposit date:2015-05-26
Release date:2016-05-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Porcine CD38 exhibits prominent secondary NAD(+) cyclase activity.
Protein Sci., 25, 2016
4E4K
DownloadVisualize
BU of 4e4k by Molmil
Crystal Structure of PPARgamma with the ligand JO21
Descriptor: (2S)-3-phenyl-2-{[2'-(propan-2-yl)biphenyl-4-yl]oxy}propanoic acid, Peroxisome proliferator-activated receptor gamma
Authors:Pochetti, G, Montanari, R, Loiodice, F, Fracchiolla, G, Laghezza, A, Carbonara, G, Piemontese, L, Lavecchia, A, Novellino, E.
Deposit date:2012-03-13
Release date:2013-01-23
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:New 2-(Aryloxy)-3-phenylpropanoic Acids as Peroxisome Proliferator-Activated Receptor alpha/gamma Dual Agonists Able To Upregulate Mitochondrial Carnitine Shuttle System Gene Expression.
J.Med.Chem., 56, 2013
4E4Q
DownloadVisualize
BU of 4e4q by Molmil
Crystal structure of PPARgamma with the ligand FS214
Descriptor: (2R)-3-phenyl-2-{[2'-(propan-2-yl)biphenyl-4-yl]oxy}propanoic acid, Peroxisome proliferator-activated receptor gamma
Authors:Pochetti, G, Montanari, R, Loiodice, F, Fracchiolla, G, Laghezza, A, Carbonara, G, Piemontese, L, Lavecchia, A, Novellino, E.
Deposit date:2012-03-13
Release date:2013-01-23
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:New 2-(Aryloxy)-3-phenylpropanoic Acids as Peroxisome Proliferator-Activated Receptor alpha/gamma Dual Agonists Able To Upregulate Mitochondrial Carnitine Shuttle System Gene Expression.
J.Med.Chem., 56, 2013
4K7U
DownloadVisualize
BU of 4k7u by Molmil
Crystal structure of Zn2.3-hUb (human ubiquitin) adduct from a solution 70 mM zinc acetate/1.3 mM hUb
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Fermani, S, Falini, G, Calvaresi, M, Bottoni, A, Arnesano, F, Natile, G.
Deposit date:2013-04-17
Release date:2013-05-08
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Conformational selection of ubiquitin quaternary structures driven by zinc ions.
Chemistry, 19, 2013
4K6O
DownloadVisualize
BU of 4k6o by Molmil
X-ray structure uridine phosphorylase from Vibrio cholerae in complex with 6-methyluracil at 1.17 A resolution
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 6-methylpyrimidine-2,4-diol, ...
Authors:Prokofev, I.I, Lashkov, A.A, Gabdoulkhakov, A.G, Betzel, C, Mikhailov, A.M.
Deposit date:2013-04-16
Release date:2014-05-07
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.17 Å)
Cite:Crystallization and preliminary X-ray study of Vibrio cholerae uridine phosphorylase in complex with 6-methyluracil.
Acta Crystallogr.,Sect.F, 70, 2014
5ARJ
DownloadVisualize
BU of 5arj by Molmil
crystal structure of porcine RNase 4 D80A mutant
Descriptor: RIBONUCLEASE 4
Authors:Liang, S, Acharya, K.R.
Deposit date:2015-09-25
Release date:2016-01-20
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural Basis of Substrate Specificity in Porcine Rnase 4.
FEBS J., 283, 2016

224931

數據於2024-09-11公開中

PDB statisticsPDBj update infoContact PDBjnumon