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5XD1
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BU of 5xd1 by Molmil
Crystal structure of Mycobacterium smegmatis MutT1 in complex with Ap5A, ATP and magnesium
Descriptor: ADENOSINE-5'-PENTAPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, GLYCEROL, ...
Authors:Arif, S.M, Varshney, U, Vijayan, M.
Deposit date:2017-03-24
Release date:2017-08-09
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Hydrolysis of diadenosine polyphosphates. Exploration of an additional role of Mycobacterium smegmatis MutT1
J. Struct. Biol., 199, 2017
5XD3
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BU of 5xd3 by Molmil
Crystal structure of Mycobacterium smegmatis MutT1 in complex with ATP (I)
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, GLYCEROL, MAGNESIUM ION, ...
Authors:Arif, S.M, Varshney, U, Vijayan, M.
Deposit date:2017-03-24
Release date:2017-08-09
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Hydrolysis of diadenosine polyphosphates. Exploration of an additional role of Mycobacterium smegmatis MutT1
J. Struct. Biol., 199, 2017
5YGU
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BU of 5ygu by Molmil
Crystal structure of Escherichia coli (strain K12) mRNA Decapping Complex RppH-DapF
Descriptor: Diaminopimelate epimerase, IODIDE ION, L(+)-TARTARIC ACID, ...
Authors:Wang, Q, Guan, Z.Y, Zhang, D.L, Zou, T.T, Yin, P.
Deposit date:2017-09-27
Release date:2018-06-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.298 Å)
Cite:DapF stabilizes the substrate-favoring conformation of RppH to stimulate its RNA-pyrophosphohydrolase activity in Escherichia coli.
Nucleic Acids Res., 46, 2018
5XD2
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BU of 5xd2 by Molmil
Crystal structure of Mycobacterium smegmatis MutT1 in complex with Ap5A, ATP and manganese
Descriptor: ADENOSINE-5'-PENTAPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, GLYCEROL, ...
Authors:Arif, S.M, Varshney, U, Vijayan, M.
Deposit date:2017-03-24
Release date:2017-08-09
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Hydrolysis of diadenosine polyphosphates. Exploration of an additional role of Mycobacterium smegmatis MutT1
J. Struct. Biol., 199, 2017
5XD5
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BU of 5xd5 by Molmil
Crystal structure of Mycobacterium smegmatis MutT1 in complex with ATP, magnesium fluoride and phosphate
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CHLORIDE ION, FLUORIDE ION, ...
Authors:Arif, S.M, Varshney, U, Vijayan, M.
Deposit date:2017-03-24
Release date:2017-08-09
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Hydrolysis of diadenosine polyphosphates. Exploration of an additional role of Mycobacterium smegmatis MutT1
J. Struct. Biol., 199, 2017
5XD4
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BU of 5xd4 by Molmil
Crystal structure of Mycobacterium smegmatis MutT1 in complex with ATP (II)
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, GLYCEROL, MAGNESIUM ION, ...
Authors:Arif, S.M, Varshney, U, Vijayan, M.
Deposit date:2017-03-24
Release date:2017-08-09
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Hydrolysis of diadenosine polyphosphates. Exploration of an additional role of Mycobacterium smegmatis MutT1
J. Struct. Biol., 199, 2017
3CNG
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BU of 3cng by Molmil
Crystal structure of NUDIX hydrolase from Nitrosomonas europaea
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, GLYCEROL, ...
Authors:Osipiuk, J, Xu, X, Zheng, H, Savchenko, A, Edwards, A.M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2008-03-25
Release date:2008-04-08
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:X-ray crystal structure of NUDIX hydrolase from Nitrosomonas europaea.
To be Published
4HFQ
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BU of 4hfq by Molmil
Crystal structure of UDP-X diphosphatase
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DI(HYDROXYETHYL)ETHER, ...
Authors:Duong-Ly, K.C, Amzel, L.M, Gabelli, S.B.
Deposit date:2012-10-05
Release date:2013-08-07
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.39 Å)
Cite:A UDP-X diphosphatase from Streptococcus pneumoniae hydrolyzes precursors of peptidoglycan biosynthesis.
Plos One, 8, 2013
2A6T
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BU of 2a6t by Molmil
Crystal structure of S.pombe mRNA decapping enzyme Dcp2p
Descriptor: SPAC19A8.12
Authors:She, M, Chen, N, Song, H.
Deposit date:2005-07-04
Release date:2005-12-20
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure and functional analysis of Dcp2p from Schizosaccharomyces pombe
Nat.Struct.Mol.Biol., 13, 2006
2QJO
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BU of 2qjo by Molmil
crystal structure of a bifunctional NMN adenylyltransferase/ADP ribose pyrophosphatase (NadM) complexed with ADPRP and NAD from Synechocystis sp.
Descriptor: ADENOSINE-5-DIPHOSPHORIBOSE, Bifunctional NMN adenylyltransferase/Nudix hydrolase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Huang, N, Sorci, L, Zhang, X, Brautigan, C, Raffaelli, N, Magni, G, Grishin, N.V, Osterman, A, Zhang, H.
Deposit date:2007-07-08
Release date:2008-03-11
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Bifunctional NMN Adenylyltransferase/ADP-Ribose Pyrophosphatase: Structure and Function in Bacterial NAD Metabolism.
Structure, 16, 2008
2QJT
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BU of 2qjt by Molmil
Crystal structure of a bifunctional NMN adenylyltransferase/ADP ribose pyrophosphatase complexed with AMP and MN ion from Francisella tularensis
Descriptor: ADENOSINE MONOPHOSPHATE, MANGANESE (II) ION, Nicotinamide-nucleotide adenylyltransferase
Authors:Huang, N, Sorci, L, Zhang, X, Brautigan, C, Raffaelli, N, Magni, G, Grishin, N.V, Osterman, A, Zhang, H.
Deposit date:2007-07-09
Release date:2008-03-04
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Bifunctional NMN Adenylyltransferase/ADP-Ribose Pyrophosphatase: Structure and Function in Bacterial NAD Metabolism.
Structure, 16, 2008
2QKM
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BU of 2qkm by Molmil
The crystal structure of fission yeast mRNA decapping enzyme Dcp1-Dcp2 complex
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, SPAC19A8.12 protein, SPBC3B9.21 protein
Authors:She, M, Song, H.
Deposit date:2007-07-11
Release date:2008-04-15
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural basis of dcp2 recognition and activation by dcp1.
Mol.Cell, 29, 2008
2R5W
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BU of 2r5w by Molmil
Crystal structure of a bifunctional NMN adenylyltransferase/ADP ribose pyrophosphatase from Francisella tularensis
Descriptor: CHLORIDE ION, MAGNESIUM ION, Nicotinamide-nucleotide adenylyltransferase
Authors:Huang, N, Sorci, L, Zhang, X, Brautigan, C, Li, X, Raffaelli, N, Grishin, N, Osterman, A, Zhang, H.
Deposit date:2007-09-04
Release date:2008-03-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Bifunctional NMN Adenylyltransferase/ADP-Ribose Pyrophosphatase: Structure and Function in Bacterial NAD Metabolism.
Structure, 16, 2008
2FML
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BU of 2fml by Molmil
Crystal structure of MutT/nudix family protein from Enterococcus faecalis
Descriptor: GLYCEROL, MutT/nudix family protein
Authors:Chang, C, Quartey, P, Moy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2006-01-09
Release date:2006-02-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Crystal structure of MutT/nudix family protein from Enterococcus faecalis
To be Published
2GB5
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BU of 2gb5 by Molmil
Crystal structure of NADH pyrophosphatase (EC 3.6.1.22) (1790429) from Escherichia coli K12 at 2.30 A resolution
Descriptor: NADH pyrophosphatase, ZINC ION
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2006-03-09
Release date:2006-03-28
Last modified:2023-01-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of NADH pyrophosphatase (EC 3.6.1.22) (1790429) from Escherichia coli K12 at 2.30 A resolution
To be published
5KQ1
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BU of 5kq1 by Molmil
Crystal structure of S. pombe Dcp1/Dcp2 in complex with H. sapiens PNRC2
Descriptor: Proline-rich nuclear receptor coactivator 2, mRNA decapping complex subunit 2, mRNA-decapping enzyme subunit 1
Authors:Mugridge, J.S, Ziemniak, M, Jemielity, J, Gross, J.D.
Deposit date:2016-07-05
Release date:2016-10-05
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.002 Å)
Cite:Structural basis of mRNA-cap recognition by Dcp1-Dcp2.
Nat.Struct.Mol.Biol., 23, 2016
3FJY
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BU of 3fjy by Molmil
Crystal structure of a probable MutT1 protein from Bifidobacterium adolescentis
Descriptor: GLYCEROL, Probable MutT1 protein
Authors:Palani, K, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-12-15
Release date:2009-01-13
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structure of a probable MutT1 protein from Bifidobacterium adolescentis
To be Published
6VCK
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BU of 6vck by Molmil
Crystal structure of E.coli RppH-DapF in complex with GDP, Mg2+ and F-
Descriptor: CHLORIDE ION, Diaminopimelate epimerase, FLUORIDE ION, ...
Authors:Gao, A, Vasilyev, N, Kaushik, A, Duan, W, Serganov, A.
Deposit date:2019-12-21
Release date:2020-02-05
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Principles of RNA and nucleotide discrimination by the RNA processing enzyme RppH.
Nucleic Acids Res., 48, 2020
6VCM
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BU of 6vcm by Molmil
Crystal structure of E.coli RppH-DapF in complex with GTP, Mg2+ and F-
Descriptor: CHLORIDE ION, Diaminopimelate epimerase, FLUORIDE ION, ...
Authors:Gao, A, Vasilyev, N, Kaushik, A, Duan, W, Serganov, A.
Deposit date:2019-12-21
Release date:2020-02-05
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Principles of RNA and nucleotide discrimination by the RNA processing enzyme RppH.
Nucleic Acids Res., 48, 2020
6Y3Z
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BU of 6y3z by Molmil
Crystal structure of the Pby1 ATP-grasp enzyme bound to the S. cerevisiae mRNA decapping complex (Dcp1-Dcp2-Edc3)
Descriptor: Enhancer of mRNA-decapping protein 3, MAGNESIUM ION, Probable tubulin--tyrosine ligase PBY1, ...
Authors:Graille, M.
Deposit date:2020-02-19
Release date:2020-04-29
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.49 Å)
Cite:Pby1 is a direct partner of the Dcp2 decapping enzyme.
Nucleic Acids Res., 48, 2020
6VCL
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BU of 6vcl by Molmil
Crystal structure of E.coli RppH-DapF in complex with pppGpp, Mg2+ and F-
Descriptor: CHLORIDE ION, Diaminopimelate epimerase, FLUORIDE ION, ...
Authors:Gao, A, Vasilyev, N, Kaushik, A, Duan, W, Serganov, A.
Deposit date:2019-12-21
Release date:2020-02-05
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Principles of RNA and nucleotide discrimination by the RNA processing enzyme RppH.
Nucleic Acids Res., 48, 2020
5N2V
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BU of 5n2v by Molmil
Changes in conformational equilibria regulate the activity of the Dcp2 decapping enzyme
Descriptor: 7N-METHYL-8-HYDROGUANOSINE-5'-DIPHOSPHATE, Edc1, MAGNESIUM ION, ...
Authors:Holdermann, I, Sprangers, R.
Deposit date:2017-02-08
Release date:2017-05-24
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Changes in conformational equilibria regulate the activity of the Dcp2 decapping enzyme.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5LON
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BU of 5lon by Molmil
Structure of /K. lactis/ Dcp1-Dcp2 decapping complex.
Descriptor: KLLA0E01827p, KLLA0F23980p
Authors:Charenton, C, Taverniti, V, Gaudon-Plesse, C, Back, R, Seraphin, B, Graille, M.
Deposit date:2016-08-09
Release date:2016-10-05
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structure of the active form of Dcp1-Dcp2 decapping enzyme bound to m(7)GDP and its Edc3 activator.
Nat.Struct.Mol.Biol., 23, 2016
5LOP
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BU of 5lop by Molmil
Structure of the active form of /K. lactis/ Dcp1-Dcp2-Edc3 decapping complex bound to m7GDP
Descriptor: 7N-METHYL-8-HYDROGUANOSINE-5'-DIPHOSPHATE, KLLA0A11308p, KLLA0E01827p, ...
Authors:Charenton, C, Taverniti, V, Gaudon-Plesse, C, Back, R, Seraphin, B, Graille, M.
Deposit date:2016-08-09
Release date:2016-10-05
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structure of the active form of Dcp1-Dcp2 decapping enzyme bound to m(7)GDP and its Edc3 activator.
Nat.Struct.Mol.Biol., 23, 2016
3GZ5
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BU of 3gz5 by Molmil
Crystal structure of Shewanella oneidensis NrtR
Descriptor: MutT/nudix family protein, SODIUM ION
Authors:Huang, N, Zhang, H.
Deposit date:2009-04-06
Release date:2009-06-09
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure and function of an ADP-ribose-dependent transcriptional regulator of NAD metabolism
Structure, 17, 2009

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數據於2024-10-16公開中

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