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6CO7
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BU of 6co7 by Molmil
Structure of the nvTRPM2 channel in complex with Ca2+
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Zhang, Z, Toth, B, Szollosi, A, Chen, J, Csanady, L.
Deposit date:2018-03-12
Release date:2018-05-16
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (3.07 Å)
Cite:Structure of a TRPM2 channel in complex with Ca2+explains unique gating regulation.
Elife, 7, 2018
4ZBP
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BU of 4zbp by Molmil
Crystal structure of the AMPCPR-bound AtNUDT7
Descriptor: ALPHA-BETA METHYLENE ADP-RIBOSE, Nudix hydrolase 7, SULFATE ION
Authors:Tang, Q, Liu, C, Zhong, C, Ding, J.
Deposit date:2015-04-15
Release date:2015-09-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structures of Arabidopsis thaliana Nudix Hydrolase NUDT7 Reveal a Previously Unobserved Conformation.
Mol Plant, 8, 2015
4ZB3
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BU of 4zb3 by Molmil
Crystal structure of the apo AtNUDT7
Descriptor: Nudix hydrolase 7, SULFATE ION
Authors:Tang, Q, Liu, C, Zhong, C, Ding, J.
Deposit date:2015-04-14
Release date:2015-09-09
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structures of Arabidopsis thaliana Nudix Hydrolase NUDT7 Reveal a Previously Unobserved Conformation.
Mol Plant, 8, 2015
7E44
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BU of 7e44 by Molmil
Crystal structure of NudC complexed with dpCoA
Descriptor: DEPHOSPHO COENZYME A, NADH pyrophosphatase, ZINC ION
Authors:Zhou, W, Guan, Z.Y, Yin, P, Zhang, D.L.
Deposit date:2021-02-10
Release date:2021-07-28
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural insights into dpCoA-RNA decapping by NudC.
Rna Biol., 18, 2021
6NCI
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BU of 6nci by Molmil
Crystal structure of CDP-Chase: Vector data collection
Descriptor: D-ribose, DI(HYDROXYETHYL)ETHER, PHOSPHATE ION, ...
Authors:Miller, M.S, Shi, W, Gabelli, S.B.
Deposit date:2018-12-11
Release date:2019-02-06
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Getting the Most Out of Your Crystals: Data Collection at the New High-Flux, Microfocus MX Beamlines at NSLS-II.
Molecules, 24, 2019
6NCH
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BU of 6nch by Molmil
Crystal structure of CDP-Chase: Raster data collection
Descriptor: D-ribose, PHOSPHATE ION, Phosphohydrolase (MutT/nudix family protein), ...
Authors:Miller, M.S, Shi, W, Gabelli, S.B.
Deposit date:2018-12-11
Release date:2019-02-06
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2 Å)
Cite:Getting the Most Out of Your Crystals: Data Collection at the New High-Flux, Microfocus MX Beamlines at NSLS-II.
Molecules, 24, 2019
6O3P
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BU of 6o3p by Molmil
Crystal structure of the catalytic domain of mouse Nudt12 in complex with AMP and 3 Mg2+ ions
Descriptor: ADENOSINE MONOPHOSPHATE, MAGNESIUM ION, Peroxisomal NADH pyrophosphatase NUDT12, ...
Authors:Tong, L, Wu, Y.
Deposit date:2019-02-27
Release date:2019-05-29
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural and mechanistic basis of mammalian Nudt12 RNA deNADding.
Nat.Chem.Biol., 15, 2019
5IW5
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BU of 5iw5 by Molmil
Crystal structure of E. coli NudC in complex with NMN
Descriptor: BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE, NADH pyrophosphatase, ZINC ION
Authors:Li, S, Du, J, Patel, D.J.
Deposit date:2016-03-22
Release date:2016-07-13
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure and function of the bacterial decapping enzyme NudC
Nat.Chem.Biol., 12, 2016
5IW4
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BU of 5iw4 by Molmil
Crystal structure of E. coli NudC in complex with NAD
Descriptor: NADH pyrophosphatase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ZINC ION
Authors:Li, S, Du, J, Patel, D.J.
Deposit date:2016-03-22
Release date:2016-07-13
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure and function of the bacterial decapping enzyme NudC.
Nat.Chem.Biol., 12, 2016
5J3T
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BU of 5j3t by Molmil
Crystal structure of S. pombe Dcp2:Dcp1:Edc1 mRNA decapping complex
Descriptor: Edc1, FORMIC ACID, MAGNESIUM ION, ...
Authors:Valkov, E, Muthukumar, S, Chang, C.T, Jonas, S, Weichenrieder, O, Izaurralde, E.
Deposit date:2016-03-31
Release date:2016-05-18
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure of the Dcp2-Dcp1 mRNA-decapping complex in the activated conformation.
Nat.Struct.Mol.Biol., 23, 2016
5KQ4
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BU of 5kq4 by Molmil
Crystal structure of S. pombe Dcp1/Dcp2 in complex with H. sapiens PNRC2 and synthetic cap analog
Descriptor: Proline-rich nuclear receptor coactivator 2, [[(2~{R},3~{S},4~{R},5~{R})-5-(2-azanyl-7-methyl-6-oxidanylidene-3~{H}-purin-7-ium-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-sulfanyl-phosphoryl] [[[(2~{R},3~{S},4~{R},5~{R})-5-(2-azanyl-7-methyl-6-oxidanylidene-3~{H}-purin-7-ium-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-sulfanyl-phosphoryl]oxy-oxidanyl-phosphoryl] hydrogen phosphate, mRNA decapping complex subunit 2, ...
Authors:Mugridge, J.S, Ziemniak, M, Jemielity, J, Gross, J.D.
Deposit date:2016-07-05
Release date:2016-10-05
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.56 Å)
Cite:Structural basis of mRNA-cap recognition by Dcp1-Dcp2.
Nat.Struct.Mol.Biol., 23, 2016
5ISY
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BU of 5isy by Molmil
Crystal structure of Nudix family protein with NAD
Descriptor: NADH pyrophosphatase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ZINC ION
Authors:Zhang, D, Guan, Z, Zou, T, Yin, P.
Deposit date:2016-03-15
Release date:2016-09-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.354 Å)
Cite:Structural basis of prokaryotic NAD-RNA decapping by NudC
Cell Res., 26, 2016
5J3Y
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BU of 5j3y by Molmil
Crystal structure of S. pombe Dcp2:Dcp1 mRNA decapping complex
Descriptor: mRNA decapping complex subunit 2, mRNA-decapping enzyme subunit 1
Authors:Valkov, E, Muthukumar, S, Chang, C.T, Jonas, S, Weichenrieder, O, Izaurralde, E.
Deposit date:2016-03-31
Release date:2016-05-18
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.288 Å)
Cite:Structure of the Dcp2-Dcp1 mRNA-decapping complex in the activated conformation.
Nat.Struct.Mol.Biol., 23, 2016
5KQ1
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BU of 5kq1 by Molmil
Crystal structure of S. pombe Dcp1/Dcp2 in complex with H. sapiens PNRC2
Descriptor: Proline-rich nuclear receptor coactivator 2, mRNA decapping complex subunit 2, mRNA-decapping enzyme subunit 1
Authors:Mugridge, J.S, Ziemniak, M, Jemielity, J, Gross, J.D.
Deposit date:2016-07-05
Release date:2016-10-05
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.002 Å)
Cite:Structural basis of mRNA-cap recognition by Dcp1-Dcp2.
Nat.Struct.Mol.Biol., 23, 2016
5XD1
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BU of 5xd1 by Molmil
Crystal structure of Mycobacterium smegmatis MutT1 in complex with Ap5A, ATP and magnesium
Descriptor: ADENOSINE-5'-PENTAPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, GLYCEROL, ...
Authors:Arif, S.M, Varshney, U, Vijayan, M.
Deposit date:2017-03-24
Release date:2017-08-09
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Hydrolysis of diadenosine polyphosphates. Exploration of an additional role of Mycobacterium smegmatis MutT1
J. Struct. Biol., 199, 2017
5XD3
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BU of 5xd3 by Molmil
Crystal structure of Mycobacterium smegmatis MutT1 in complex with ATP (I)
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, GLYCEROL, MAGNESIUM ION, ...
Authors:Arif, S.M, Varshney, U, Vijayan, M.
Deposit date:2017-03-24
Release date:2017-08-09
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Hydrolysis of diadenosine polyphosphates. Exploration of an additional role of Mycobacterium smegmatis MutT1
J. Struct. Biol., 199, 2017
5XD5
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BU of 5xd5 by Molmil
Crystal structure of Mycobacterium smegmatis MutT1 in complex with ATP, magnesium fluoride and phosphate
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CHLORIDE ION, FLUORIDE ION, ...
Authors:Arif, S.M, Varshney, U, Vijayan, M.
Deposit date:2017-03-24
Release date:2017-08-09
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Hydrolysis of diadenosine polyphosphates. Exploration of an additional role of Mycobacterium smegmatis MutT1
J. Struct. Biol., 199, 2017
5XD4
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BU of 5xd4 by Molmil
Crystal structure of Mycobacterium smegmatis MutT1 in complex with ATP (II)
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, GLYCEROL, MAGNESIUM ION, ...
Authors:Arif, S.M, Varshney, U, Vijayan, M.
Deposit date:2017-03-24
Release date:2017-08-09
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Hydrolysis of diadenosine polyphosphates. Exploration of an additional role of Mycobacterium smegmatis MutT1
J. Struct. Biol., 199, 2017
5XD2
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BU of 5xd2 by Molmil
Crystal structure of Mycobacterium smegmatis MutT1 in complex with Ap5A, ATP and manganese
Descriptor: ADENOSINE-5'-PENTAPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, GLYCEROL, ...
Authors:Arif, S.M, Varshney, U, Vijayan, M.
Deposit date:2017-03-24
Release date:2017-08-09
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Hydrolysis of diadenosine polyphosphates. Exploration of an additional role of Mycobacterium smegmatis MutT1
J. Struct. Biol., 199, 2017
5YGU
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BU of 5ygu by Molmil
Crystal structure of Escherichia coli (strain K12) mRNA Decapping Complex RppH-DapF
Descriptor: Diaminopimelate epimerase, IODIDE ION, L(+)-TARTARIC ACID, ...
Authors:Wang, Q, Guan, Z.Y, Zhang, D.L, Zou, T.T, Yin, P.
Deposit date:2017-09-27
Release date:2018-06-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.298 Å)
Cite:DapF stabilizes the substrate-favoring conformation of RppH to stimulate its RNA-pyrophosphohydrolase activity in Escherichia coli.
Nucleic Acids Res., 46, 2018
3Q4I
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BU of 3q4i by Molmil
Crystal structure of CDP-Chase in complex with Gd3+
Descriptor: GADOLINIUM ION, Phosphohydrolase (MutT/nudix family protein)
Authors:Duong-Ly, K.C, Gabelli, S.B, Amzel, L.M.
Deposit date:2010-12-23
Release date:2011-07-13
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The Nudix Hydrolase CDP-Chase, a CDP-Choline Pyrophosphatase, Is an Asymmetric Dimer with Two Distinct Enzymatic Activities.
J.Bacteriol., 193, 2011
3Q1P
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BU of 3q1p by Molmil
Crystal structure of CDP-Chase
Descriptor: Phosphohydrolase (MutT/nudix family protein), SULFATE ION
Authors:Duong-Ly, K.C, Gabelli, S.B, Amzel, L.M.
Deposit date:2010-12-17
Release date:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The Nudix Hydrolase CDP-Chase, a CDP-Choline Pyrophosphatase, Is an Asymmetric Dimer with Two Distinct Enzymatic Activities.
J.Bacteriol., 193, 2011
2A6T
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BU of 2a6t by Molmil
Crystal structure of S.pombe mRNA decapping enzyme Dcp2p
Descriptor: SPAC19A8.12
Authors:She, M, Chen, N, Song, H.
Deposit date:2005-07-04
Release date:2005-12-20
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure and functional analysis of Dcp2p from Schizosaccharomyces pombe
Nat.Struct.Mol.Biol., 13, 2006
2QKM
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BU of 2qkm by Molmil
The crystal structure of fission yeast mRNA decapping enzyme Dcp1-Dcp2 complex
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, SPAC19A8.12 protein, SPBC3B9.21 protein
Authors:She, M, Song, H.
Deposit date:2007-07-11
Release date:2008-04-15
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural basis of dcp2 recognition and activation by dcp1.
Mol.Cell, 29, 2008
2QJO
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BU of 2qjo by Molmil
crystal structure of a bifunctional NMN adenylyltransferase/ADP ribose pyrophosphatase (NadM) complexed with ADPRP and NAD from Synechocystis sp.
Descriptor: ADENOSINE-5-DIPHOSPHORIBOSE, Bifunctional NMN adenylyltransferase/Nudix hydrolase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Huang, N, Sorci, L, Zhang, X, Brautigan, C, Raffaelli, N, Magni, G, Grishin, N.V, Osterman, A, Zhang, H.
Deposit date:2007-07-08
Release date:2008-03-11
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Bifunctional NMN Adenylyltransferase/ADP-Ribose Pyrophosphatase: Structure and Function in Bacterial NAD Metabolism.
Structure, 16, 2008

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數據於2024-09-25公開中

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