5VJB
 
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2N3R
 | | NMR structure of the II-III-VI three-way junction from the VS ribozyme and identification of magnesium-binding sites using paramagnetic relaxation enhancement | | Descriptor: | MAGNESIUM ION, RNA (62-MER) | | Authors: | Bonneau, E, Girard, N, Lemieux, S, Legault, P. | | Deposit date: | 2015-06-09 | | Release date: | 2015-07-15 | | Last modified: | 2024-05-01 | | Method: | SOLUTION NMR | | Cite: | The NMR structure of the II-III-VI three-way junction from the Neurospora VS ribozyme reveals a critical tertiary interaction and provides new insights into the global ribozyme structure.
Rna, 21, 2015
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2BJ2
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6HBX
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6HBT
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6HC5
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1QVA
 | | YEAST INITIATION FACTOR 4A N-TERMINAL DOMAIN | | Descriptor: | INITIATION FACTOR 4A | | Authors: | Johnson, E.R, McKay, D.B. | | Deposit date: | 1999-07-07 | | Release date: | 1999-12-02 | | Last modified: | 2024-02-14 | | Method: | X-RAY DIFFRACTION (2.5 Å) | | Cite: | Crystallographic structure of the amino terminal domain of yeast initiation factor 4A, a representative DEAD-box RNA helicase
RNA, 5, 1999
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1S2M
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5VJ9
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1KFO
 | | CRYSTAL STRUCTURE OF AN RNA HELIX RECOGNIZED BY A ZINC-FINGER PROTEIN: AN 18 BASE PAIR DUPLEX AT 1.6 RESOLUTION | | Descriptor: | 5'-R(*GP*AP*AP*UP*GP*CP*CP*UP*GP*CP*GP*AP*GP*CP*AP*(5BU)P*CP*CP*C)-3' | | Authors: | Lima, S, Hildenbrand, J, Korostelev, A, Hattman, S, Li, H. | | Deposit date: | 2001-11-21 | | Release date: | 2001-12-07 | | Last modified: | 2024-02-07 | | Method: | X-RAY DIFFRACTION (1.6 Å) | | Cite: | Crystal structure of an RNA helix recognized by a zinc-finger protein: an 18-bp duplex at 1.6 A resolution.
RNA, 8, 2002
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2GV4
 | | Solution structure of the poliovirus 3'-UTR Y-stem | | Descriptor: | Short RNA strand 5'-GGACCUCUCGAAAGAGUGGUCC-3' | | Authors: | Heus, H.A, Zoll, J, Tessari, M, van Kuppeveld, F.J.M, Melchers, W.J.G. | | Deposit date: | 2006-05-02 | | Release date: | 2007-03-20 | | Last modified: | 2024-05-29 | | Method: | SOLUTION NMR | | Cite: | Breaking pseudo-twofold symmetry in the poliovirus 3'-UTR Y-stem by restoring Watson-Crick base pairs.
Rna, 13, 2007
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2NCI
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1E95
 | | Solution structure of the pseudoknot of SRV-1 RNA, involved in ribosomal frameshifting | | Descriptor: | RNA (5'-(*GP*CP*GP*GP*CP*CP*AP*GP*CP*UP*CP* CP*AP*GP*GP*CP*CP*GP*CP*CP*AP*AP*AP*CP* AP*AP*UP*AP*UP*GP*GP*AP*GP*CP*AP*C)-3') | | Authors: | Michiels, P.J.A, Versleyen, A, Pleij, C.W.A, Hilbers, C.W, Heus, H.A. | | Deposit date: | 2000-10-09 | | Release date: | 2001-08-23 | | Last modified: | 2024-05-15 | | Method: | SOLUTION NMR | | Cite: | Solution Structure of the Pseudoknot of Srv-1 RNA, Involved in Ribosomal Frameshifting
J.Mol.Biol., 310, 2001
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7EDT
 | | RNA duplex containing CC mispairs | | Descriptor: | RNA (5'-R(*GP*GP*AP*CP*UP*CP*CP*GP*GP*(5BU)P*CP*C)-3'), SODIUM ION, SPERMINE | | Authors: | Kondo, J, Tada, Y. | | Deposit date: | 2021-03-17 | | Release date: | 2022-03-23 | | Last modified: | 2024-04-03 | | Method: | X-RAY DIFFRACTION (1.2 Å) | | Cite: | RNA duplex containing CC mispairs
To Be Published
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2AP0
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2AP5
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7ECN
 | | RNA duplex containing C-Ag-A base pairs | | Descriptor: | RNA (5'-R(*GP*GP*GP*CP*CP*CP*GP*GP*AP*CP*CP*C)-3'), SILVER ION | | Authors: | Kondo, J, Tsudura, A. | | Deposit date: | 2021-03-12 | | Release date: | 2022-03-16 | | Last modified: | 2024-05-29 | | Method: | X-RAY DIFFRACTION (1.6 Å) | | Cite: | RNA duplex containing C-Ag-A base pairs
To Be Published
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7ECP
 | | RNA duplex containing C-Ag-U | | Descriptor: | RNA (5'-R(*GP*GP*GP*CP*CP*CP*GP*GP*UP*CP*CP*C)-3'), SILVER ION | | Authors: | Kondo, J, Tsudura, A. | | Deposit date: | 2021-03-12 | | Release date: | 2022-03-16 | | Last modified: | 2024-05-29 | | Method: | X-RAY DIFFRACTION (2.91 Å) | | Cite: | RNA duplex containing C-Ag-U
To Be Published
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7ECO
 | | RNA duplex containing U-Ag-U base pairs | | Descriptor: | RNA (5'-R(*GP*GP*GP*UP*CP*CP*GP*GP*UP*CP*CP*C)-3'), SILVER ION | | Authors: | Kondo, J, Tsudura, A. | | Deposit date: | 2021-03-12 | | Release date: | 2022-03-16 | | Last modified: | 2024-05-29 | | Method: | X-RAY DIFFRACTION (1.81 Å) | | Cite: | RNA duplex containing U-Ag-U base pairs
To Be Published
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7EI9
 | | RNA kink-turn motif with pyrrolo cytosine | | Descriptor: | RNA (5'-R(*GP*GP*CP*GP*A)-D(P*(4PC))-R(P*GP*AP*AP*CP*CP*GP*GP*GP*GP*AP*GP*CP*C)-3'), STRONTIUM ION | | Authors: | Kondo, J, Miyauchi, T. | | Deposit date: | 2021-03-30 | | Release date: | 2022-03-30 | | Last modified: | 2023-11-29 | | Method: | X-RAY DIFFRACTION (2.7 Å) | | Cite: | RNA kink-turn motif with pyrrolo cytosine
To Be Published
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7EFH
 | | RNA kink-turn motif | | Descriptor: | RNA (5'-R(*GP*GP*CP*GP*AP*AP*GP*AP*AP*CP*CP*GP*GP*GP*GP*AP*GP*CP*C)-3') | | Authors: | Kondo, J, Nagashima, M. | | Deposit date: | 2021-03-21 | | Release date: | 2022-03-23 | | Last modified: | 2023-11-29 | | Method: | X-RAY DIFFRACTION (2.7 Å) | | Cite: | RNA kink-turn motif
To Be Published
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7EFG
 | | RNA kink-turn motif | | Descriptor: | RNA (5'-R(*GP*GP*CP*GP*AP*AP*GP*AP*AP*CP*CP*GP*GP*GP*GP*AP*GP*CP*C)-3') | | Authors: | Kondo, J, Nagashima, M. | | Deposit date: | 2021-03-21 | | Release date: | 2022-04-13 | | Last modified: | 2023-11-29 | | Method: | X-RAY DIFFRACTION (2.6 Å) | | Cite: | RNA kink-turn motif
To Be Published
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7OB9
 | | Cryo-EM structure of human RNA Polymerase I in elongation state | | Descriptor: | DNA non-template strand, DNA template strand, DNA-directed RNA polymerase I subunit RPA1, ... | | Authors: | Misiaszek, A.D, Girbig, M, Mueller, C.W. | | Deposit date: | 2021-04-21 | | Release date: | 2021-12-08 | | Last modified: | 2021-12-22 | | Method: | ELECTRON MICROSCOPY (2.7 Å) | | Cite: | Cryo-EM structures of human RNA polymerase I.
Nat.Struct.Mol.Biol., 28, 2021
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5X3Z
 | | Solution structure of musashi1 RBD2 in complex with RNA | | Descriptor: | RNA (5'-R(*GP*UP*AP*GP*U)-3'), RNA-binding protein Musashi homolog 1 | | Authors: | Iwaoka, R, Nagata, T, Tsuda, K, Imai, T, Okano, H, Kobayashi, N, Katahira, M. | | Deposit date: | 2017-02-09 | | Release date: | 2017-12-13 | | Last modified: | 2024-05-01 | | Method: | SOLUTION NMR | | Cite: | Structural Insight into the Recognition of r(UAG) by Musashi-1 RBD2, and Construction of a Model of Musashi-1 RBD1-2 Bound to the Minimum Target RNA
Molecules, 22, 2017
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1M82
 | | SOLUTION STRUCTURE OF THE COMPLEMENTARY RNA PROMOTER OF INFLUENZA A VIRUS | | Descriptor: | RNA (25-MER): THE COMPLEMENTARY RNA PROMOTER OF INFLUENZA A VIRUS | | Authors: | Park, C.-J, Bae, S.-H, Lee, M.-K, Varani, G, Choi, B.-S. | | Deposit date: | 2002-07-24 | | Release date: | 2003-06-03 | | Last modified: | 2024-05-22 | | Method: | SOLUTION NMR | | Cite: | Solution structure of the influenza A virus cRNA promoter: implications for differential recognition of viral promoter structures by RNA-dependent RNA polymerase
NUCLEIC ACIDS RES., 31, 2003
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