PDB: 238582 resultsInfo pagesStatus searchChemie searchBIRD

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7NAF	State E2 nucleolar 60S ribosomal biogenesis intermediate - Spb1-MTD local model Descriptor: 25S rRNA, 25S rRNA (cytosine(2870)-C(5))-methyltransferase, 27S pre-rRNA (guanosine(2922)-2'-O)-methyltransferase, ... Authors: Cruz, V.E, Sekulski, K, Peddada, N, Erzberger, J.P. Deposit date: 2021-06-21 Release date: 2022-11-09 Last modified: 2024-06-05 Method: ELECTRON MICROSCOPY (3.13 Å) Cite: Sequence-specific remodeling of a topologically complex RNP substrate by Spb4. Nat.Struct.Mol.Biol., 29, 2022
7NAN	Human 20S proteasome core particle Descriptor: Proteasome subunit alpha type-1, Proteasome subunit alpha type-2, Proteasome subunit alpha type-3, ... Authors: Zhao, J, Makhija, S, Huang, B, Cheng, Y. Deposit date: 2021-06-22 Release date: 2022-11-02 Last modified: 2025-05-14 Method: ELECTRON MICROSCOPY (2.8 Å) Cite: Structural insights into the human PA28-20S proteasome enabled by efficient tagging and purification of endogenous proteins. Proc.Natl.Acad.Sci.USA, 119, 2022
7NAD	State E2 nucleolar 60S ribosomal biogenesis intermediate - Spb4 local refinement model Descriptor: 25S rRNA, 5.8S rRNA, 60S ribosomal protein L17-A, ... Authors: Cruz, V.E, Sekulski, K, Peddada, N, Erzberger, J.P. Deposit date: 2021-06-21 Release date: 2022-11-09 Last modified: 2024-06-05 Method: ELECTRON MICROSCOPY (3.04 Å) Cite: Sequence-specific remodeling of a topologically complex RNP substrate by Spb4. Nat.Struct.Mol.Biol., 29, 2022
7N6H	The crystal structure of the GH30 subfamily 10 enzyme, AcXbh30A from Acetivibrio clariflavus Descriptor: ACETATE ION, AcXbh30A, CHLORIDE ION Authors: Tan, K, St John, F.J. Deposit date: 2021-06-08 Release date: 2022-08-17 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.28 Å) Cite: The first crystal structure of a xylobiose-bound xylobiohydrolase with high functional specificity from the bacterial glycoside hydrolase family 30, subfamily 10. Febs Lett., 596, 2022
7MYX	Crystal structure of the PH domain (R86A) of Akt1 Descriptor: RAC-alpha serine/threonine-protein kinase Authors: Bae, H, Park, E, Cole, P.A, Eck, M.J. Deposit date: 2021-05-22 Release date: 2022-11-09 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.39 Å) Cite: PH domain-mediated autoinhibition and oncogenic activation of Akt. Elife, 11, 2022
7NBB	Branched Lys48- and Lys63-linked tri-ubiquitin (K48-K63-Ub3) in complex with synthetic nanobody NbSL3 Descriptor: CHLORIDE ION, GLYCEROL, MAGNESIUM ION, ... Authors: Lange, S.M, Kulathu, Y. Deposit date: 2021-01-26 Release date: 2022-08-10 Last modified: 2024-10-23 Method: X-RAY DIFFRACTION (1.55 Å) Cite: VCP/p97-associated proteins are binders and debranching enzymes of K48-K63-branched ubiquitin chains. Nat.Struct.Mol.Biol., 2024
7MYT	Crystal Structure of HPV L1-directed B25.M05 Fab Descriptor: B25.M05 Fab Heavy Chain, B25.M05 Fab Light Chain Authors: Singh, S, Pancera, M. Deposit date: 2021-05-21 Release date: 2022-11-09 Last modified: 2024-11-13 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Structural Characterization of Immune Responses to HPV vaccination To Be Published
7NAC	State E2 nucleolar 60S ribosomal biogenesis intermediate - Composite model Descriptor: 25S rRNA, 25S rRNA (cytosine(2870)-C(5))-methyltransferase, 27S pre-rRNA (guanosine(2922)-2'-O)-methyltransferase, ... Authors: Cruz, V.E, Sekulski, K, Peddada, N, Erzberger, J.P. Deposit date: 2021-06-21 Release date: 2022-11-09 Last modified: 2024-06-05 Method: ELECTRON MICROSCOPY (3.04 Å) Cite: Sequence-specific remodeling of a topologically complex RNP substrate by Spb4. Nat.Struct.Mol.Biol., 29, 2022
7MX2	Cryo-EM structure of human ternary NatC complex with a Bisubstrate inhibitor Descriptor: CARBOXYMETHYL COENZYME *A, N-alpha-acetyltransferase 30, N-alpha-acetyltransferase 35, ... Authors: Deng, S, Marmorstein, R. Deposit date: 2021-05-18 Release date: 2022-12-14 Last modified: 2024-11-06 Method: ELECTRON MICROSCOPY (3.64 Å) Cite: Molecular role of NAA38 in thermostability and catalytic activity of the human NatC N-terminal acetyltransferase. Structure, 31, 2023
7MX9	Crystal structure of the SARS-CoV-2 ORF8 accessory protein Descriptor: ORF8 protein Authors: Bailey-Elkin, B.A, Stetefeld, J. Deposit date: 2021-05-18 Release date: 2023-01-25 Last modified: 2024-10-23 Method: X-RAY DIFFRACTION (2.6 Å) Cite: The unique ORF8 protein of SARS-CoV-2 binds to human dendritic cells and induces a cytokine storm To Be Published
7MLL	Solution structure of Exenatide (exendin-4) in 30-vol% trifluoroethanol using CS-Rosetta Descriptor: Exendin-4 Authors: Mishra, S.H, Bhavaraju, S. Deposit date: 2021-04-28 Release date: 2021-05-19 Last modified: 2024-10-30 Method: SOLUTION NMR Cite: Facilitated structure verification of the biopharmaceutical peptide exenatide by 2D heteronuclear NMR maps. J Pharm Biomed Anal, 203, 2021
7MP7	Rules for designing protein fold switches and their implications for the folding code Descriptor: Sb3 Authors: He, Y, Chen, Y, Ruan, B, Choi, J, Chen, Y, Motabar, D, Solomon, T, Simmerman, R, Kauffman, T, Gallagher, T, Bryan, P, Orban, J. Deposit date: 2021-05-04 Release date: 2022-05-18 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Design and characterization of a protein fold switching network. Nat Commun, 14, 2023
7N21	NMR structure of AnIB-OH Descriptor: Alpha-conotoxin AnIB Authors: Conibear, A.C, Rosengren, K.J, Lee, H.S. Deposit date: 2021-05-28 Release date: 2021-11-17 Last modified: 2024-11-06 Method: SOLUTION NMR Cite: Posttranslational modifications of alpha-conotoxins: sulfotyrosine and C-terminal amidation stabilise structures and increase acetylcholine receptor binding. Rsc Med Chem, 12, 2021
7NE8	Tick salivary protein BSAP1 Descriptor: tick salivary protein BSAP1 Authors: Denisov, S.S, Ippel, J.H, Castoldi, E, Hackeng, T.M, Dijkgraaf, I. Deposit date: 2021-02-03 Release date: 2021-06-16 Last modified: 2024-10-16 Method: SOLUTION NMR Cite: Molecular basis of anticoagulant and anticomplement activity of the tick salivary protein Salp14 and its homologs. J.Biol.Chem., 297, 2021
7MPA	Structure and topology of DWORF in bicelles by oriented solid-state NMR Descriptor: Sarcoplasmic/endoplasmic reticulum calcium ATPase regulator DWORF Authors: Reddy, U.V, Weber, D.K, Veglia, G.V. Deposit date: 2021-05-04 Release date: 2021-06-30 Last modified: 2024-05-15 Method: SOLID-STATE NMR Cite: A kink in DWORF helical structure controls the activation of the sarcoplasmic reticulum Ca 2+ -ATPase. Structure, 30, 2022
7N22	NMR structure of AnIB[Y(SO3)16Y]-NH2 Descriptor: Alpha-conotoxin AnIB Authors: Conibear, A.C, Rosengren, K.J, Lee, H.S. Deposit date: 2021-05-28 Release date: 2021-11-17 Last modified: 2024-11-20 Method: SOLUTION NMR Cite: Posttranslational modifications of alpha-conotoxins: sulfotyrosine and C-terminal amidation stabilise structures and increase acetylcholine receptor binding. Rsc Med Chem, 12, 2021
7N20	NMR structure of native AnIB Descriptor: Alpha-conotoxin AnIB Authors: Conibear, A.C, Rosengren, K.J, Lee, H.S. Deposit date: 2021-05-28 Release date: 2021-11-17 Last modified: 2024-11-20 Method: SOLUTION NMR Cite: Posttranslational modifications of alpha-conotoxins: sulfotyrosine and C-terminal amidation stabilise structures and increase acetylcholine receptor binding. Rsc Med Chem, 12, 2021
7N82	NMR Solution structure of Se0862 Descriptor: Biofilm-related protein Authors: Zhang, N, LiWang, A.L. Deposit date: 2021-06-11 Release date: 2021-07-14 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Assessment of prediction methods for protein structures determined by NMR in CASP14: Impact of AlphaFold2. Proteins, 89, 2021
7N45	Solution NMR structure of the N-terminal globular domain of the endemic HKU1 coronavirus nucleocapsid protein Descriptor: Nucleoprotein Authors: Caruso, I.P, Marques, A.L, Santana-Silva, M.C, Almeida, F.C.L, Amorim, G.C. Deposit date: 2021-06-03 Release date: 2022-06-08 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Solution NMR structure of the N-terminal globular domain of the endemic HKU1 coronavirus nucleocapsid protein. To Be Published
7N23	NMR structure of AnIB[Y(SO3)16Y]-OH Descriptor: Alpha-conotoxin AnIB Authors: Conibear, A.C, Rosengren, K.J, Lee, H.S. Deposit date: 2021-05-28 Release date: 2021-11-10 Last modified: 2024-10-23 Method: SOLUTION NMR Cite: Posttranslational modifications of alpha-conotoxins: sulfotyrosine and C-terminal amidation stabilise structures and increase acetylcholine receptor binding. Rsc Med Chem, 12, 2021
7MN1	Rules for designing protein fold switches and their implications for the folding code Descriptor: Sa1 Authors: He, Y, Chen, Y, Ruan, B, Choi, J, Chen, Y, Motabar, D, Solomon, T, Simmerman, R, Kauffman, T, Gallagher, T, Bryan, P, Orban, J. Deposit date: 2021-04-30 Release date: 2022-05-18 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Design and characterization of a protein fold switching network. Nat Commun, 14, 2023
7MQ4	Rules for designing protein fold switches and their implications for the folding code Descriptor: Sb1 Authors: He, Y, Chen, Y, Ruan, B, Choi, J, Chen, Y, Motabar, D, Solomon, T, Simmerman, R, Kauffman, T, Gallagher, T, Bryan, P, Orban, J. Deposit date: 2021-05-05 Release date: 2022-05-18 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Design and characterization of a protein fold switching network. Nat Commun, 14, 2023
7N0T	NMR structure of EpI[Y(SO)315Y]-OH Descriptor: Alpha-conotoxin EpI Authors: Conibear, A.C, Rosengren, K.J, Lee, H.S. Deposit date: 2021-05-26 Release date: 2021-11-10 Last modified: 2024-10-16 Method: SOLUTION NMR Cite: Posttranslational modifications of alpha-conotoxins: sulfotyrosine and C-terminal amidation stabilise structures and increase acetylcholine receptor binding. Rsc Med Chem, 12, 2021
7MU6	Ask1 bound to compound 28 Descriptor: 2-methoxy-N-(6-{4-[(2S)-1,1,1-trifluoropropan-2-yl]-4H-1,2,4-triazol-3-yl}pyridin-2-yl)pyridine-3-carboxamide, Mitogen-activated protein kinase kinase kinase 5 Authors: Chodaparambil, J.V, Marcotte, D.J. Deposit date: 2021-05-14 Release date: 2024-07-17 Method: X-RAY DIFFRACTION (2.165 Å) Cite: Discovery of Potent, Selective, and Brain-Penetrant Apoptosis Signal-Regulating Kinase 1 (ASK1) Inhibitors that Modulate Brain Inflammation In Vivo. J.Med.Chem., 64, 2021
7NSE	BOVINE ENDOTHELIAL NITRIC OXIDE SYNTHASE, H4B-FREE, ADMA COMPLEX Descriptor: ACETATE ION, CACODYLIC ACID, GLYCEROL, ... Authors: Raman, C.S, Li, H, Martasek, P, Masters, B.S.S, Poulos, T.L. Deposit date: 1999-01-13 Release date: 2002-05-29 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (2.35 Å) Cite: Crystal Structures of the Heme Domain of Bovine Endothelial Nitric Oxide Synthase Complexed with Arginine Analogues To be Published

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