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4K5U
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BU of 4k5u by Molmil
Recognition of the BG-H Antigen by a Lamprey Variable Lymphocyte Receptor
Descriptor: Variable lymphocyte receptor, beta-D-galactopyranose
Authors:Luo, M, Velikovsky, C.A, Yang, X.B, Mariuzza, R.A.
Deposit date:2013-04-15
Release date:2013-06-26
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.698 Å)
Cite:Recognition of the thomsen-friedenreich pancarcinoma carbohydrate antigen by a lamprey variable lymphocyte receptor.
J.Biol.Chem., 288, 2013
2QBO
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BU of 2qbo by Molmil
Crystal structure of the P450cam G248V mutant in the cyanide bound state
Descriptor: CAMPHOR, CYANIDE ION, Cytochrome P450-cam, ...
Authors:von Koenig, K, Makris, T.M, Sligar, S.D, Schlichting, I.
Deposit date:2007-06-18
Release date:2007-12-25
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Alteration of P450 Distal Pocket Solvent Leads to Impaired Proton Delivery and Changes in Heme Geometry.
Biochemistry, 46, 2007
4KR4
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BU of 4kr4 by Molmil
Salmonella typhi OmpF complex with Ampicillin
Descriptor: (2S,5R,6R)-6-{[(2R)-2-AMINO-2-PHENYLETHANOYL]AMINO}-3,3-DIMETHYL-7-OXO-4-THIA-1-AZABICYCLO[3.2.0]HEPTANE-2-CARBOXYLIC ACID, Outer membrane protein F
Authors:Madhuranayaki, T, Balasubramaniam, D, Krishnaswamy, S.
Deposit date:2013-05-16
Release date:2014-05-28
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:Salmonella typhi OmpF complex with Ampicillin
To be published
1TRN
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BU of 1trn by Molmil
CRYSTAL STRUCTURE OF HUMAN TRYPSIN 1: UNEXPECTED PHOSPHORYLATION OF TYROSINE 151
Descriptor: PHOSPHORYLISOPROPANE, TRYPSIN
Authors:Gaboriaud, C, Fontecilla-Camps, J.C.
Deposit date:1995-03-16
Release date:1995-06-03
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of human trypsin 1: unexpected phosphorylation of Tyr151.
J.Mol.Biol., 259, 1996
3HJH
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BU of 3hjh by Molmil
A rigid N-terminal clamp restrains the motor domains of the bacterial transcription-repair coupling factor
Descriptor: COBALT (II) ION, Transcription-repair-coupling factor
Authors:Murphy, M, Gong, P, Ralto, K, Manelyte, L, Savery, N, Theis, K.
Deposit date:2009-05-21
Release date:2009-10-20
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:An N-terminal clamp restrains the motor domains of the bacterial transcription-repair coupling factor Mfd.
Nucleic Acids Res., 37, 2009
4M6E
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BU of 4m6e by Molmil
The high resolution structure of tyrocidine A reveals an amphipathic dimer
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, METHANOL, tyrocidine A
Authors:Loll, P.J, Economou, N.J, Nahoum, V.
Deposit date:2013-08-09
Release date:2014-03-19
Last modified:2025-03-26
Method:X-RAY DIFFRACTION (0.95 Å)
Cite:The high resolution structure of tyrocidine A reveals an amphipathic dimer.
Biochim.Biophys.Acta, 1838, 2014
8FS5
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BU of 8fs5 by Molmil
Structure of S. cerevisiae Rad24-RFC loading the 9-1-1 clamp onto a 10-nt gapped DNA in step 3 (open 9-1-1 and stably bound chamber DNA)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Checkpoint protein RAD24, DDC1 isoform 1, ...
Authors:Zheng, F, Georgescu, R, Yao, Y.N, O'Donnell, M.E, Li, H.
Deposit date:2023-01-09
Release date:2023-06-14
Last modified:2025-06-04
Method:ELECTRON MICROSCOPY (2.76 Å)
Cite:Structures of 9-1-1 DNA checkpoint clamp loading at gaps from start to finish and ramification to biology.
Biorxiv, 2023
8FS4
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BU of 8fs4 by Molmil
Structure of S. cerevisiae Rad24-RFC loading the 9-1-1 clamp onto a 10-nt gapped DNA in step 2 (open 9-1-1 ring and flexibly bound chamber DNA)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Checkpoint protein RAD24, DDC1 isoform 1, ...
Authors:Zheng, F, Georgescu, R, Yao, Y.N, O'Donnell, M.E, Li, H.
Deposit date:2023-01-09
Release date:2023-06-14
Last modified:2025-06-04
Method:ELECTRON MICROSCOPY (2.94 Å)
Cite:Structures of 9-1-1 DNA checkpoint clamp loading at gaps from start to finish and ramification to biology.
Biorxiv, 2023
8FS3
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BU of 8fs3 by Molmil
Structure of S. cerevisiae Rad24-RFC loading the 9-1-1 clamp onto a 10-nt gapped DNA in step 1 (open 9-1-1 and shoulder bound DNA only)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Checkpoint protein RAD24, DDC1 isoform 1, ...
Authors:Zheng, F, Georgescu, R, Yao, Y.N, O'Donnell, M.E, Li, H.
Deposit date:2023-01-09
Release date:2023-06-14
Last modified:2025-05-21
Method:ELECTRON MICROSCOPY (2.93 Å)
Cite:Structures of 9-1-1 DNA checkpoint clamp loading at gaps from start to finish and ramification to biology.
Biorxiv, 2023
8FS8
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BU of 8fs8 by Molmil
Structure of S. cerevisiae Rad24-RFC loading the 9-1-1 clamp onto a 5-nt gapped DNA (9-1-1 encircling fully bound DNA)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Checkpoint protein RAD24, DDC1 isoform 1, ...
Authors:Zheng, F, Georgescu, R, Yao, Y.N, O'Donnell, M.E, Li, H.
Deposit date:2023-01-09
Release date:2023-06-14
Last modified:2025-05-28
Method:ELECTRON MICROSCOPY (3.04 Å)
Cite:Structures of 9-1-1 DNA checkpoint clamp loading at gaps from start to finish and ramification to biology.
Biorxiv, 2023
8FS7
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BU of 8fs7 by Molmil
Structure of S. cerevisiae Rad24-RFC loading the 9-1-1 clamp onto a 10-nt gapped DNA in step 5 (closed 9-1-1 and stably bound chamber DNA)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Checkpoint protein RAD24, DDC1 isoform 1, ...
Authors:Zheng, F, Georgescu, R, Yao, Y.N, O'Donnell, M.E, Li, H.
Deposit date:2023-01-09
Release date:2023-06-14
Last modified:2025-05-21
Method:ELECTRON MICROSCOPY (2.85 Å)
Cite:Structures of 9-1-1 DNA checkpoint clamp loading at gaps from start to finish and ramification to biology.
Biorxiv, 2023
8FS6
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BU of 8fs6 by Molmil
Structure of S. cerevisiae Rad24-RFC loading the 9-1-1 clamp onto a 10-nt gapped DNA in step 4 (partially closed 9-1-1 and stably bound chamber DNA)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Checkpoint protein RAD24, DDC1 isoform 1, ...
Authors:Zheng, F, Georgescu, R, Yao, Y.N, O'Donnell, M.E, Li, H.
Deposit date:2023-01-09
Release date:2023-06-14
Last modified:2025-05-28
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structures of 9-1-1 DNA checkpoint clamp loading at gaps from start to finish and ramification to biology.
Biorxiv, 2023
6DEG
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BU of 6deg by Molmil
Crystal structure of a DNA polymerase III subunit beta DnaN sliding clamp from Bartonella birtlesii LL-WM9
Descriptor: Beta sliding clamp
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2018-05-11
Release date:2018-05-30
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Crystal structure of a DNA polymerase III subunit beta DnaN sliding clamp from Bartonella birtlesii LL-WM9
To Be Published
4MXP
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BU of 4mxp by Molmil
Structural Basis for PI(4)P-Specific Membrane Recruitment of the Legionella pneumophila Effector DrrA/SidM
Descriptor: (2R)-3-{[(R)-hydroxy{[(1R,2R,3R,4R,5S,6R)-2,3,5,6-tetrahydroxy-4-(phosphonooxy)cyclohexyl]oxy}phosphoryl]oxy}propane-1,2-diyl dibutanoate, Defects in Rab1 recruitment protein A, SODIUM ION
Authors:Del Campo, C.M, Mishra, A.K, Wang, Y.H, Roy, C.R, Janmey, P.A, Lambright, D.G.
Deposit date:2013-09-26
Release date:2014-03-19
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Structural Basis for PI(4)P-Specific Membrane Recruitment of the Legionella pneumophila Effector DrrA/SidM.
Structure, 22, 2014
6VS0
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BU of 6vs0 by Molmil
protein B
Descriptor: CHLORAMPHENICOL, Multidrug transporter MdfA, PRASEODYMIUM ION
Authors:Lu, M, Lu, M.M.
Deposit date:2020-02-10
Release date:2020-06-03
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure and mechanism of a redesigned multidrug transporter from the Major Facilitator Superfamily.
Sci Rep, 10, 2020
6VRZ
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BU of 6vrz by Molmil
protein A
Descriptor: CHLORAMPHENICOL, Multidrug transporter MdfA, PRASEODYMIUM ION
Authors:Lu, M, Lu, M.M.
Deposit date:2020-02-10
Release date:2020-06-03
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure and mechanism of a redesigned multidrug transporter from the Major Facilitator Superfamily.
Sci Rep, 10, 2020
4IRU
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BU of 4iru by Molmil
Crystal Structure of lepB GAP core in a transition state mimetic complex with Rab1A and ALF3
Descriptor: ACETATE ION, ALUMINUM FLUORIDE, GLYCEROL, ...
Authors:Mishra, A.K, Delcampo, C.M, Collins, R.E, Roy, C.R, Lambright, D.G.
Deposit date:2013-01-15
Release date:2013-07-10
Last modified:2024-11-27
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:The Legionella pneumophila GTPase Activating Protein LepB Accelerates Rab1 Deactivation by a Non-canonical Hydrolytic Mechanism.
J.Biol.Chem., 288, 2013
4CF2
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BU of 4cf2 by Molmil
Interrogating HIV integrase for compounds that bind- a SAMPL challenge
Descriptor: (2s)-6-[[(1r,2s)-2-(4-azanylbutanoylamino)-2,3-dihydro-1h-inden-1-yl]methyl]-2-(3-hydroxy-3-oxopropyl)-2,3-dihydro-1,4-benzodioxine-5-carboxylic acid, INTEGRASE, SULFATE ION
Authors:Peat, T.S.
Deposit date:2013-11-13
Release date:2013-11-20
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Interrogating HIV Integrase for Compounds that Bind- a Sampl Challenge.
J.Comput.Aided Mol.Des., 28, 2014
4CF9
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BU of 4cf9 by Molmil
Interrogating HIV integrase for compounds that bind- a SAMPL challenge
Descriptor: (2R)-2-(3-hydroxy-3-oxopropyl)-6-[(E)-[(2S)-2-oxidanyl-2,3-dihydroinden-1-ylidene]methyl]-2,3-dihydro-1,4-benzodioxine-5-carboxylic acid, (3R)-3-(3-hydroxy-3-oxopropyl)-6-[(E)-[(2R)-2-oxidanyl-2,3-dihydroinden-1-ylidene]methyl]-2,3-dihydro-1,4-benzodioxine-5-carboxylic acid, 1,2-ETHANEDIOL, ...
Authors:Peat, T.S.
Deposit date:2013-11-14
Release date:2013-11-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Interrogating HIV Integrase for Compounds that Bind- a Sampl Challenge.
J.Comput.Aided Mol.Des., 28, 2014
4CEZ
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BU of 4cez by Molmil
Interrogating HIV integrase for compounds that bind- a SAMPL challenge
Descriptor: (2S)-2-(2-carboxyethyl)-6-{[{2-[(cyclohexylmethyl)carbamoyl]benzyl}(prop-2-en-1-yl)amino]methyl}-2,3-dihydro-1,4-benzodioxine-5-carboxylic acid, CHLORIDE ION, GLYCEROL, ...
Authors:Peat, T.S.
Deposit date:2013-11-13
Release date:2013-11-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Interrogating HIV Integrase for Compounds that Bind- a Sampl Challenge.
J.Comput.Aided Mol.Des., 28, 2014
4CF1
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BU of 4cf1 by Molmil
Interrogating HIV integrase for compounds that bind- a SAMPL challenge
Descriptor: (2s)-6-[[(1r,2s)-2-(5-azanylpentanoylamino)-2,3-dihydro-1h-inden-1-yl]methyl]-2-(3-hydroxy-3-oxopropyl)-2,3-dihydro-1,4-benzodioxine-5-carboxylic acid, ACETATE ION, INTEGRASE, ...
Authors:Peat, T.S.
Deposit date:2013-11-13
Release date:2013-12-18
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Interrogating HIV Integrase for Compounds that Bind- a Sampl Challenge.
J.Comput.Aided Mol.Des., 28, 2014
4CFB
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BU of 4cfb by Molmil
Interrogating HIV integrase for compounds that bind- a SAMPL challenge
Descriptor: (R)-(4-CARBOXY-1,3-BENZODIOXOL-5-YL)METHYL-[[2-(CYCLOHEXYLMETHYLCARBAMOYL)PHENYL]METHYL]-METHYL-AZANIUM, ACETATE ION, INTEGRASE, ...
Authors:Peat, T.S.
Deposit date:2013-11-14
Release date:2013-11-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Interrogating HIV Integrase for Compounds that Bind- a Sampl Challenge.
J.Comput.Aided Mol.Des., 28, 2014
4CF0
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BU of 4cf0 by Molmil
Interrogating HIV integrase for compounds that bind- a SAMPL challenge
Descriptor: (2R)-6-[[(1R,2S)-2-(6-azanylhexanoylamino)-2,3-dihydro-1H-inden-1-yl]methyl]-2-(3-hydroxy-3-oxopropyl)-2,3-dihydro-1,4-benzodioxine-5-carboxylic acid, ACETATE ION, INTEGRASE, ...
Authors:Peat, T.S.
Deposit date:2013-11-13
Release date:2013-11-20
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Interrogating HIV Integrase for Compounds that Bind- a Sampl Challenge.
J.Comput.Aided Mol.Des., 28, 2014
4CFC
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BU of 4cfc by Molmil
Interrogating HIV integrase for compounds that bind- a SAMPL challenge
Descriptor: 5-[[[(1S)-2-(butylamino)-2-oxidanylidene-1-phenyl-ethyl]carbamoyl-methyl-amino]methyl]-1,3-benzodioxole-4-carboxylic acid, ACETATE ION, CHLORIDE ION, ...
Authors:Peat, T.S.
Deposit date:2013-11-14
Release date:2013-11-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Interrogating HIV Integrase for Compounds that Bind- a Sampl Challenge.
J.Comput.Aided Mol.Des., 28, 2014
6D57
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BU of 6d57 by Molmil
Campylobacter jejuni ferric uptake regulator S1 metalated
Descriptor: FORMIC ACID, Ferric uptake regulation protein, GLYCEROL, ...
Authors:Sarvan, S, Brunzelle, J.S, Couture, J.F.
Deposit date:2018-04-19
Release date:2018-05-23
Last modified:2025-04-02
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Functional insights into the interplay between DNA interaction and metal coordination in ferric uptake regulators.
Sci Rep, 8, 2018

238582

數據於2025-07-09公開中

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