Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3CFV
DownloadVisualize
BU of 3cfv by Molmil
Structural basis of the interaction of RbAp46/RbAp48 with histone H4
Descriptor: ARSENIC, Histone H4 peptide, Histone-binding protein RBBP7
Authors:Pei, X.-Y, Murzina, N.V, Zhang, W, McLaughlin, S, Verreault, A, Luisi, B.F, Laue, E.D.
Deposit date:2008-03-04
Release date:2008-06-10
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural Basis for the Recognition of Histone H4 by the Histone-Chaperone RbAp46.
Structure, 16, 2008
7ZTA
DownloadVisualize
BU of 7zta by Molmil
Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Leroy, E.C, Perry, T.N, Renault, T.T, Innis, C.A.
Deposit date:2022-05-09
Release date:2023-04-12
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Tetracenomycin X sequesters peptidyl-tRNA during translation of QK motifs.
Nat.Chem.Biol., 19, 2023
6GXP
DownloadVisualize
BU of 6gxp by Molmil
Cryo-EM structure of a rotated E. coli 70S ribosome in complex with RF3-GDPCP(RF3-only)
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Graf, M, Huter, P, Maracci, C, Peterek, M, Rodnina, M.V, Wilson, D.N.
Deposit date:2018-06-27
Release date:2018-08-15
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:Visualization of translation termination intermediates trapped by the Apidaecin 137 peptide during RF3-mediated recycling of RF1.
Nat Commun, 9, 2018
6Q9A
DownloadVisualize
BU of 6q9a by Molmil
Structure of tmRNA SmpB bound past E site of E. coli 70S ribosome
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Rae, C.D.
Deposit date:2018-12-17
Release date:2019-04-17
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:How a circularized tmRNA moves through the ribosome.
Science, 363, 2019
5A2Q
DownloadVisualize
BU of 5a2q by Molmil
Structure of the HCV IRES bound to the human ribosome
Descriptor: 18S RRNA, HCV IRES, MAGNESIUM ION, ...
Authors:Quade, N, Leiundgut, M, Boehringer, D, Heuvel, J.v.d, Ban, N.
Deposit date:2015-05-21
Release date:2015-07-15
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Cryo-Em Structure of Hepatitis C Virus Ires Bound to the Human Ribosome at 3.9 Angstrom Resolution
Nat.Commun., 6, 2015
1RP3
DownloadVisualize
BU of 1rp3 by Molmil
Cocrystal structure of the flagellar sigma/anti-sigma complex, Sigma-28/FlgM
Descriptor: RNA polymerase sigma factor SIGMA-28 (FliA), anti sigma factor FlgM
Authors:Sorenson, M.K, Ray, S.S, Darst, S.A.
Deposit date:2003-12-02
Release date:2004-04-06
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structure of the Flagellar Sigma/Anti-Sigma Complex Sigma(28)/FlgM Reveals an Intact Sigma Factor in an Inactive Conformation
Mol.Cell, 14, 2004
2DVY
DownloadVisualize
BU of 2dvy by Molmil
Crystal structure of restriction endonucleases PabI
Descriptor: Restriction endonuclease PabI
Authors:Miyazono, K, Watanabe, M, Kamo, M, Sawasaki, T, Nagata, K, Endo, Y, Tanokura, M, Kobayashi, I.
Deposit date:2006-08-01
Release date:2007-05-08
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Novel protein fold discovered in the PabI family of restriction enzymes
Nucleic Acids Res., 35, 2007
6NUW
DownloadVisualize
BU of 6nuw by Molmil
Yeast Ctf19 complex
Descriptor: Inner kinetochore subunit AME1, Inner kinetochore subunit CHL4, Inner kinetochore subunit CTF19, ...
Authors:Hinshaw, S.M, Harrison, S.C.
Deposit date:2019-02-03
Release date:2019-04-03
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4.25 Å)
Cite:The structure of the Ctf19c/CCAN from budding yeast.
Elife, 8, 2019
6OQI
DownloadVisualize
BU of 6oqi by Molmil
CDK2 in complex with Cpd14 (5-fluoro-4-(4-methyl-5,6,7,8-tetrahydro-4H-pyrazolo[1,5-a]azepin-3-yl)-N-(5-(4-methylpiperazin-1-yl)pyridin-2-yl)pyrimidin-2-amine)
Descriptor: 5-fluoro-N-[5-(4-methylpiperazin-1-yl)pyridin-2-yl]-4-[(4S)-4-methyl-5,6,7,8-tetrahydro-4H-pyrazolo[1,5-a]azepin-3-yl]pyrimidin-2-amine, Cyclin-dependent kinase 2
Authors:Murray, J.M.
Deposit date:2019-04-26
Release date:2020-07-29
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2 Å)
Cite:Design of a brain-penetrant CDK4/6 inhibitor for glioblastoma.
Bioorg.Med.Chem.Lett., 29, 2019
6NTW
DownloadVisualize
BU of 6ntw by Molmil
Crystal structure of E. coli YcbB
Descriptor: (2S,3R,4S)-4-{[(3S,5R)-5-(dimethylcarbamoyl)pyrrolidin-3-yl]sulfanyl}-2-[(2S,3R)-3-hydroxy-1-oxobutan-2-yl]-3-methyl-3,4-dihydro-2H-pyrrole-5-carboxylic acid, Probable L,D-transpeptidase YcbB, SULFATE ION
Authors:Caveney, N.A, Strynadka, N.C.J, Caballero, G, Worrall, L.J.
Deposit date:2019-01-30
Release date:2019-03-20
Last modified:2020-01-08
Method:X-RAY DIFFRACTION (2.76 Å)
Cite:Structural insight into YcbB-mediated beta-lactam resistance in Escherichia coli.
Nat Commun, 10, 2019
5GHD
DownloadVisualize
BU of 5ghd by Molmil
SOLUTION STRUCTURE OF LYS39 ACETYLATED HUMAN SUMO1
Descriptor: Small ubiquitin-related modifier 1
Authors:Naik, M.T, Naik, N, Shih, H, Huang, T.
Deposit date:2016-06-19
Release date:2017-06-07
Last modified:2023-11-15
Method:SOLUTION NMR
Cite:Structures of Human Sumo
To Be Published
7QXX
DownloadVisualize
BU of 7qxx by Molmil
Proteasome-ZFAND5 Complex Z+E state
Descriptor: 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B, 26S protease regulatory subunit 7, ...
Authors:Zhu, Y, Lu, Y.
Deposit date:2022-01-27
Release date:2023-02-08
Last modified:2024-09-04
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:Molecular mechanism for activation of the 26S proteasome by ZFAND5.
Mol.Cell, 83, 2023
7QXN
DownloadVisualize
BU of 7qxn by Molmil
Proteasome-ZFAND5 Complex Z+A state
Descriptor: 26S protease regulatory subunit 4, 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B, ...
Authors:Zhu, Y, Lu, Y.
Deposit date:2022-01-26
Release date:2023-02-08
Last modified:2024-09-04
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Molecular mechanism for activation of the 26S proteasome by ZFAND5.
Mol.Cell, 83, 2023
7QY7
DownloadVisualize
BU of 7qy7 by Molmil
Proteasome-ZFAND5 Complex Z-A state
Descriptor: 26S protease regulatory subunit 4, 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B, ...
Authors:Zhu, Y, Lu, Y.
Deposit date:2022-01-27
Release date:2023-02-08
Last modified:2024-09-04
Method:ELECTRON MICROSCOPY (4.7 Å)
Cite:Molecular mechanism for activation of the 26S proteasome by ZFAND5.
Mol.Cell, 83, 2023
7QYB
DownloadVisualize
BU of 7qyb by Molmil
Proteasome-ZFAND5 Complex Z-C state
Descriptor: 26S protease regulatory subunit 4, 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B, ...
Authors:Zhu, Y, Lu, Y.
Deposit date:2022-01-27
Release date:2023-02-08
Last modified:2024-09-04
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Molecular mechanism for activation of the 26S proteasome by ZFAND5.
Mol.Cell, 83, 2023
6EJW
DownloadVisualize
BU of 6ejw by Molmil
Tryptophan Repressor TrpR from E.coli wildtype with Indole-3-acetic acid as ligand
Descriptor: 1H-INDOL-3-YLACETIC ACID, Trp operon repressor
Authors:Stiel, A.C, Shanmugaratnam, S, Herud-Sikimic, O, Juergens, G, Hocker, B.
Deposit date:2017-09-23
Release date:2019-02-06
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:A biosensor for the direct visualization of auxin
Nature, 2021
7QXP
DownloadVisualize
BU of 7qxp by Molmil
Proteasome-ZFAND5 Complex Z+B state
Descriptor: 26S protease regulatory subunit 4, 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B, ...
Authors:Zhu, Y, Lu, Y.
Deposit date:2022-01-26
Release date:2023-02-08
Last modified:2024-09-04
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Molecular mechanism for activation of the 26S proteasome by ZFAND5.
Mol.Cell, 83, 2023
7QXU
DownloadVisualize
BU of 7qxu by Molmil
Proteasome-ZFAND5 Complex Z+C state
Descriptor: 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B, 26S protease regulatory subunit 7, ...
Authors:Zhu, Y, Lu, Y.
Deposit date:2022-01-27
Release date:2023-02-08
Last modified:2024-09-04
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Molecular mechanism for activation of the 26S proteasome by ZFAND5.
Mol.Cell, 83, 2023
7QYA
DownloadVisualize
BU of 7qya by Molmil
Proteasome-ZFAND5 Complex Z-B state
Descriptor: 26S protease regulatory subunit 4, 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B, ...
Authors:Zhu, Y, Lu, Y.
Deposit date:2022-01-27
Release date:2023-02-08
Last modified:2024-09-04
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:Molecular mechanism for activation of the 26S proteasome by ZFAND5.
Mol.Cell, 83, 2023
6ELB
DownloadVisualize
BU of 6elb by Molmil
Tryptophan Repressor TrpR from E.coli variant M42F T44L T81M N87G S88Y with Indole-3-acetic acid as ligand
Descriptor: 1H-INDOL-3-YLACETIC ACID, Trp operon repressor
Authors:Stiel, A.C, Shanmugaratnam, S, Herud-Sikimic, O, Juergens, G, Hocker, B.
Deposit date:2017-09-28
Release date:2019-02-06
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.437 Å)
Cite:A biosensor for the direct visualization of auxin
Nature, 2021
5ML5
DownloadVisualize
BU of 5ml5 by Molmil
Human p38alpha MAPK in complex with imidazolyl pyridine inhibitor 11b
Descriptor: 3-(2,5-dimethoxyphenyl)-~{N}-[4-[4-(4-fluorophenyl)-2-methylsulfanyl-1~{H}-imidazol-5-yl]pyridin-2-yl]propanamide, Mitogen-activated protein kinase 14, octyl beta-D-glucopyranoside
Authors:Buehrmann, M, Rauh, D.
Deposit date:2016-12-06
Release date:2017-04-05
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Optimized 4,5-Diarylimidazoles as Potent/Selective Inhibitors of Protein Kinase CK1 delta and Their Structural Relation to p38 alpha MAPK.
Molecules, 22, 2017
6ENI
DownloadVisualize
BU of 6eni by Molmil
Tryptophan Repressor TrpR from E.coli variant T44L S88Y with Indole-3-acetic acid as ligand
Descriptor: 1,2-ETHANEDIOL, 1H-INDOL-3-YLACETIC ACID, Trp operon repressor
Authors:Stiel, A.C, Shanmugaratnam, S, Herud-Sikimic, O, Juergens, G, Hocker, B.
Deposit date:2017-10-04
Release date:2019-02-06
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:A biosensor for the direct visualization of auxin
Nature, 2021
6ELG
DownloadVisualize
BU of 6elg by Molmil
Tryptophan Repressor TrpR from E.coli variant M42F T44L T81I S88Y with Indole-3-acetonitrile
Descriptor: 1H-indol-3-ylacetonitrile, Trp operon repressor
Authors:Stiel, A.C, Shanmugaratnam, S, Herud-Sikimic, O, Juergens, G, Hocker, B.
Deposit date:2017-09-28
Release date:2019-02-06
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.38 Å)
Cite:A biosensor for the direct visualization of auxin
Nature, 2021
7M4T
DownloadVisualize
BU of 7m4t by Molmil
Menin bound to M-1121
Descriptor: Menin, methyl {(1S,2R)-2-[(1S)-2-(azetidin-1-yl)-1-(3-fluorophenyl)-1-{1-[(3-methoxy-1-{4-[(1S,4S)-5-propanoyl-2,5-diazabicyclo[2.2.1]heptane-2-sulfonyl]phenyl}azetidin-3-yl)methyl]piperidin-4-yl}ethyl]cyclopentyl}carbamate, praseodymium triacetate
Authors:Stuckey, J.
Deposit date:2021-03-22
Release date:2021-08-11
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.74 Å)
Cite:Discovery of M-1121 as an Orally Active Covalent Inhibitor of Menin-MLL Interaction Capable of Achieving Complete and Long-Lasting Tumor Regression.
J.Med.Chem., 64, 2021
5MTX
DownloadVisualize
BU of 5mtx by Molmil
Dibenzooxepinone inhibitor 12b in complex with p38 MAPK
Descriptor: 3-[(3-benzamido-4-fluoranyl-phenyl)amino]-~{N}-(2-morpholin-4-ylethyl)-11-oxidanylidene-6~{H}-benzo[c][1]benzoxepine-9-carboxamide, Mitogen-activated protein kinase 14, octyl beta-D-glucopyranoside
Authors:Buehrmann, M, Rauh, D.
Deposit date:2017-01-11
Release date:2017-09-06
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Design, Synthesis, and Biological Evaluation of Novel Type I(1)/2 p38 alpha MAP Kinase Inhibitors with Excellent Selectivity, High Potency, and Prolonged Target Residence Time by Interfering with the R-Spine.
J. Med. Chem., 60, 2017

224931

数据于2024-09-11公开中

PDB statisticsPDBj update infoContact PDBjnumon