PDB: 187563 resultsInfo pagesStatus searchChemie searchBIRD

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8PI3	Cathepsin S Y132D mutant in complex with NNPI-C10 inhibitor Descriptor: 1,2-ETHANEDIOL, ACETATE ION, CADMIUM ION, ... Authors: Petruzzella, A, Lau, K, Pojer, F, Oricchio, E. Deposit date: 2023-06-21 Release date: 2024-06-05 Last modified: 2024-09-11 Method: X-RAY DIFFRACTION (1.73 Å) Cite: Antibody-peptide conjugates deliver covalent inhibitors blocking oncogenic cathepsins. Nat.Chem.Biol., 20, 2024
7OI0	E.coli delta rbfA pre-30S ribosomal subunit class D Descriptor: 16S rRNA, 30S ribosomal protein S11, 30S ribosomal protein S12, ... Authors: Maksimova, E, Korepanov, A, Baymukhametov, T, Kravchenko, O, Stolboushkina, E. Deposit date: 2021-05-11 Release date: 2021-07-14 Last modified: 2024-07-10 Method: ELECTRON MICROSCOPY (2.76 Å) Cite: RbfA Is Involved in Two Important Stages of 30S Subunit Assembly: Formation of the Central Pseudoknot and Docking of Helix 44 to the Decoding Center. Int J Mol Sci, 22, 2021
6OQU	E. coli ATP synthase State 1d Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase epsilon chain, ... Authors: Stewart, A.G, Sobti, M, Walshe, J.L. Deposit date: 2019-04-29 Release date: 2020-06-03 Last modified: 2024-03-20 Method: ELECTRON MICROSCOPY (3.2 Å) Cite: Cryo-EM structures provide insight into how E. coli F1FoATP synthase accommodates symmetry mismatch. Nat Commun, 11, 2020
6OQV	E. coli ATP Synthase State 2b Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase epsilon chain, ... Authors: Stewart, A.G, Sobti, M, Walshe, J.L. Deposit date: 2019-04-29 Release date: 2020-06-03 Last modified: 2025-05-21 Method: ELECTRON MICROSCOPY (3.3 Å) Cite: Cryo-EM structures provide insight into how E. coli F1FoATP synthase accommodates symmetry mismatch. Nat Commun, 11, 2020
6OQR	E. coli ATP Synthase ADP State 1a Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase epsilon chain, ... Authors: Stewart, A.G, Walshe, J.L, Sobti, M. Deposit date: 2019-04-29 Release date: 2020-06-03 Last modified: 2025-06-04 Method: ELECTRON MICROSCOPY (3.1 Å) Cite: Cryo-EM structures provide insight into how E. coli F1FoATP synthase accommodates symmetry mismatch. Nat Commun, 11, 2020
6OQS	E. coli ATP synthase State 1b Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase epsilon chain, ... Authors: Stewart, A.G, Sobti, M, Walshe, J.L. Deposit date: 2019-04-29 Release date: 2020-06-03 Last modified: 2025-05-21 Method: ELECTRON MICROSCOPY (3.3 Å) Cite: Cryo-EM structures provide insight into how E. coli F1FoATP synthase accommodates symmetry mismatch. Nat Commun, 11, 2020
6OQW	E. coli ATP synthase State 3a Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase epsilon chain, ... Authors: Stewart, A.G, Sobti, M, Walshe, J.L. Deposit date: 2019-04-29 Release date: 2020-06-24 Last modified: 2025-05-21 Method: ELECTRON MICROSCOPY (3.1 Å) Cite: Cryo-EM structures provide insight into how E. coli F1FoATP synthase accommodates symmetry mismatch. Nat Commun, 11, 2020
8UXB	E. coli 70S ribosome with unmodified P/E-tRNAPro(GGG) bound to slippery P-site CCC-C codon Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... Authors: Kimbrough, E.M, Dunham, C.M, Nguyen, H.A. Deposit date: 2023-11-09 Release date: 2025-07-09 Method: ELECTRON MICROSCOPY (2.9 Å) Cite: An RNA modification prevents extended codon-anticodon interactions from facilitating +1 frameshifting Nat Commun, 2025
8UZ3	E. coli 70S ribosome with unmodified e*/E-tRNAPro(GGG) bound to slippery P-site CCC-C codon Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... Authors: Kimbrough, E.M, Dunham, C.M, Nguyen, H.A. Deposit date: 2023-11-14 Release date: 2025-07-09 Method: ELECTRON MICROSCOPY (3.2 Å) Cite: An RNA modification prevents extended codon-anticodon interactions from facilitating +1 frameshifting Nat Commun, 2025
8V03	E. coli 70S ribosome with unmodified P/E-tRNAPro(GGG) bound to slippery P-site CCC-C codon Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S11, ... Authors: Kimbrough, E.M, Dunham, C.M, Nguyen, H.A. Deposit date: 2023-11-16 Release date: 2025-07-09 Method: ELECTRON MICROSCOPY (4 Å) Cite: An RNA modification prevents extended codon-anticodon interactions from facilitating +1 frameshifting Nat Commun, 2025
8UZG	E. coli 70S ribosome with unmodified e*/E-tRNAPro(GGG) bound to slippery P-site CCC-C codon Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... Authors: Kimbrough, E.M, Dunham, C.M, Nguyen, H.A. Deposit date: 2023-11-15 Release date: 2025-07-09 Method: ELECTRON MICROSCOPY (3.7 Å) Cite: An RNA modification prevents extended codon-anticodon interactions from facilitating +1 frameshifting Nat Commun, 2025
6OQT	E. coli ATP synthase State 1c Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase epsilon chain, ... Authors: Stewart, A.G, Sobti, M, Walshe, J.L. Deposit date: 2019-04-29 Release date: 2020-06-03 Last modified: 2024-03-20 Method: ELECTRON MICROSCOPY (3.1 Å) Cite: Cryo-EM structures provide insight into how E. coli F1FoATP synthase accommodates symmetry mismatch. Nat Commun, 11, 2020
9NL7	E. coli initiation complex with EQ2-YbiT in Non-hydrolytic 2/PtIM(b) conformation Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... Authors: Singh, S, Hunt, J.F. Deposit date: 2025-03-02 Release date: 2025-04-02 Method: ELECTRON MICROSCOPY (3.3 Å) Cite: E. coli initiation complex with EQ2-YbiT in Non-hydrolytic 2/PtIM(b) conformation To Be Published
9NLS	E. coli initiation complex with EQ2-YbiT in Intermediate/PtIM(b) conformation Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... Authors: Singh, S, Hunt, J.F. Deposit date: 2025-03-03 Release date: 2025-04-02 Method: ELECTRON MICROSCOPY (3.3 Å) Cite: E. coli initiation complex with EQ2-YbiT in Intermediate/PtIM(b) conformation To Be Published
9NLQ	E. coli initiation complex with EQ2-YbiT in Hydrolytic 1/PtIM(a) conformation Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... Authors: Singh, S, Hunt, J.F. Deposit date: 2025-03-03 Release date: 2025-04-02 Method: ELECTRON MICROSCOPY (3.3 Å) Cite: E.coli Initiation complex with YbiT-EQ2 (Hydrolytic-II) To Be Published
9NLF	E. coli initiation complex with EQ2-YbiT in Hydrolytic 2/PtIM(a) conformation Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... Authors: Singh, S, Hunt, J.F. Deposit date: 2025-03-03 Release date: 2025-04-02 Method: ELECTRON MICROSCOPY (3.2 Å) Cite: E. coli initiation complex with EQ2-YbiT in Hydrolytic 2/PtIM(a) conformation To Be Published
9NJF	E. coli pre-elongation complex without an A-site tRNA with EQ2-YbiT in Non-hydrolytic 1/PtIM(a) conformation Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... Authors: Singh, S, Hunt, J.F. Deposit date: 2025-02-27 Release date: 2025-04-02 Method: ELECTRON MICROSCOPY (3.4 Å) Cite: E. coli pre-elongation complex without an A-site tRNA with EQ2-YbiT in Non-hydrolytic 1/PtIM(a) conformation To Be Published
9NKL	E. coli 70S initiation complex Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... Authors: Singh, S, Hunt, J.F. Deposit date: 2025-03-01 Release date: 2025-04-02 Method: ELECTRON MICROSCOPY (3.3 Å) Cite: E. coli 70S initiation complex To Be Published
9NLJ	E.coli Initiation complex with Uup-EQ2 Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... Authors: Singh, S, Hunt, J.F. Deposit date: 2025-03-03 Release date: 2025-04-02 Method: ELECTRON MICROSCOPY (3.1 Å) Cite: E.coli Initiation complex with Uup-EQ2 To Be Published
9NLH	E.coli Initiation complex with YheS-EQ2 Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... Authors: Singh, S, Hunt, J.F. Deposit date: 2025-03-03 Release date: 2025-04-02 Method: ELECTRON MICROSCOPY (3.1 Å) Cite: E.coli Initiation complex with YheS-EQ2 To Be Published
9NLB	E. coli initiation complex with EQ2-EttA in Hydrolytic 2 conformation Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... Authors: Singh, S, Hunt, J.F. Deposit date: 2025-03-03 Release date: 2025-04-02 Method: ELECTRON MICROSCOPY (3.2 Å) Cite: E. coli initiation complex with EQ2-EttA in Hydrolytic 2 conformation To Be Published
9NL6	E. coli initiation complex with EQ2-YbiT in Non-hydrolytic 1/PtIM(a) conformation Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... Authors: Singh, S, Hunt, J.F. Deposit date: 2025-03-02 Release date: 2025-04-02 Method: ELECTRON MICROSCOPY (3.2 Å) Cite: E. coli initiation complex with EQ2-YbiT in Non-hydrolytic 1/PtIM(a) conformation To Be Published
9NL5	E. coli pre-elongation complex without an A-site tRNA with EQ2-EttA in Hydrolytic 1 conformation Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... Authors: Singh, S, Hunt, J.F. Deposit date: 2025-03-02 Release date: 2025-04-02 Method: ELECTRON MICROSCOPY (3 Å) Cite: E. coli pre-elongation complex without an A-site tRNA with EttA-EQ2 To Be Published
9NJV	E. coli 70S initiation complex (bL33 absent) Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... Authors: Singh, S, Hunt, J.F. Deposit date: 2025-02-28 Release date: 2025-04-02 Method: ELECTRON MICROSCOPY (3.1 Å) Cite: E. coli 70S initiation complex (bL33 absent) To Be Published
8UTJ	E. coli 70S ribosome with unmodified lys-tRNAPro(GGG) bound to slippery P-site CCC-C codon in the 0 frame Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S11, ... Authors: Kimbrough, E.M, Dunham, C.M, Nguyen, H.A. Deposit date: 2023-10-31 Release date: 2025-07-09 Method: ELECTRON MICROSCOPY (3.5 Å) Cite: An RNA modification prevents extended codon-anticodon interactions from facilitating +1 frameshifting Nat Commun, 2025

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