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6Z8W
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BU of 6z8w by Molmil
X-ray structure of the complex between human alpha thrombin and a thrombin binding aptamer variant (TBA-3G), which contains 1-beta-D-glucopyranosyl residue in the side chain of Thy3 at N3.
Descriptor: D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide, POTASSIUM ION, Prothrombin, ...
Authors:Troisi, R, Timofeev, E.N, Sica, F.
Deposit date:2020-06-02
Release date:2021-01-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Expanding the recognition interface of the thrombin-binding aptamer HD1 through modification of residues T3 and T12.
Mol Ther Nucleic Acids, 23, 2021
7F6Q
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BU of 7f6q by Molmil
Crystal structure of metal-citrate-binding mutant (S79A) protein (MctA) of ABC transporter in apo state
Descriptor: 1,2-ETHANEDIOL, 1,3-PROPANDIOL, ACETATE ION, ...
Authors:Kanaujia, S.P, Mandal, S.K.
Deposit date:2021-06-25
Release date:2021-12-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Structural and thermodynamic insights into a novel Mg 2+ -citrate-binding protein from the ABC transporter superfamily.
Acta Crystallogr D Struct Biol, 77, 2021
7F6S
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BU of 7f6s by Molmil
Crystal structure of metal-citrate-binding mutant (T199A) protein (MctA) of ABC transporter in apo state
Descriptor: 1,2-ETHANEDIOL, CARBON DIOXIDE, CHLORIDE ION, ...
Authors:Kanaujia, S.P, Mandal, S.K.
Deposit date:2021-06-25
Release date:2021-12-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural and thermodynamic insights into a novel Mg 2+ -citrate-binding protein from the ABC transporter superfamily.
Acta Crystallogr D Struct Biol, 77, 2021
7F6T
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BU of 7f6t by Molmil
Crystal structure of metal-citrate-binding mutant (Y221F) protein (MctA) of ABC transporter in apo state
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, CARBON DIOXIDE, ...
Authors:Kanaujia, S.P, Mandal, S.K.
Deposit date:2021-06-25
Release date:2021-12-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural and thermodynamic insights into a novel Mg 2+ -citrate-binding protein from the ABC transporter superfamily.
Acta Crystallogr D Struct Biol, 77, 2021
7F6F
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BU of 7f6f by Molmil
Crystal structure of metal-citrate-binding protein (MctA) of ABC transporter endogenously bound to Mg2+-citrate complex (Form II)
Descriptor: 1,2-ETHANEDIOL, CARBON DIOXIDE, CITRIC ACID, ...
Authors:Kanaujia, S.P, Mandal, S.K, Gogoi, P.
Deposit date:2021-06-25
Release date:2021-12-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural and thermodynamic insights into a novel Mg 2+ -citrate-binding protein from the ABC transporter superfamily.
Acta Crystallogr D Struct Biol, 77, 2021
7F6P
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BU of 7f6p by Molmil
Crystal structure of metal-citrate-binding mutant (D28A) protein (MctA) of ABC transporter endogenously bound to citrate
Descriptor: 1,2-ETHANEDIOL, 1,3-PROPANDIOL, CARBON DIOXIDE, ...
Authors:Kanaujia, S.P, Mandal, S.K.
Deposit date:2021-06-25
Release date:2021-12-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural and thermodynamic insights into a novel Mg 2+ -citrate-binding protein from the ABC transporter superfamily.
Acta Crystallogr D Struct Biol, 77, 2021
7F6R
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BU of 7f6r by Molmil
Crystal structure of metal-citrate-binding mutant (S164A) protein (MctA) of ABC transporter in apo state
Descriptor: 1,2-ETHANEDIOL, CARBONATE ION, GLYCEROL, ...
Authors:Kanaujia, S.P, Mandal, S.K.
Deposit date:2021-06-25
Release date:2021-12-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Structural and thermodynamic insights into a novel Mg 2+ -citrate-binding protein from the ABC transporter superfamily.
Acta Crystallogr D Struct Biol, 77, 2021
7F6N
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BU of 7f6n by Molmil
Crystal structure of metal-citrate-binding mutant (S26A) protein (MctA) of ABC transporter endogenously bound to Mg2+-citrate complex
Descriptor: 1,2-ETHANEDIOL, CITRIC ACID, DI(HYDROXYETHYL)ETHER, ...
Authors:Kanaujia, S.P, Mandal, S.K.
Deposit date:2021-06-25
Release date:2021-12-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural and thermodynamic insights into a novel Mg 2+ -citrate-binding protein from the ABC transporter superfamily.
Acta Crystallogr D Struct Biol, 77, 2021
7F6U
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BU of 7f6u by Molmil
Crystal structure of metal-citrate-binding mutant (Y221A) protein (MctA) of ABC transporter in apo state
Descriptor: 1,2-ETHANEDIOL, 2-(hydroxymethyl)butane-1,4-diol, 2-HYDROXY BUTANE-1,4-DIOL, ...
Authors:Kanaujia, S.P, Mandal, S.K.
Deposit date:2021-06-25
Release date:2021-12-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural and thermodynamic insights into a novel Mg 2+ -citrate-binding protein from the ABC transporter superfamily.
Acta Crystallogr D Struct Biol, 77, 2021
7F6O
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BU of 7f6o by Molmil
Crystal structure of metal-citrate-binding mutant (S26A) protein (MctA) of ABC transporter endogenously bound to Mn2+-citrate complex
Descriptor: 1,2-ETHANEDIOL, CITRIC ACID, DI(HYDROXYETHYL)ETHER, ...
Authors:Kanaujia, S.P, Mandal, S.K.
Deposit date:2021-06-25
Release date:2021-12-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural and thermodynamic insights into a novel Mg 2+ -citrate-binding protein from the ABC transporter superfamily.
Acta Crystallogr D Struct Biol, 77, 2021
7F6E
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BU of 7f6e by Molmil
Crystal structure of metal-citrate-binding protein (MctA) of ABC transporter endogenously bound to Mg2+-citrate complex (Form I)
Descriptor: (2S)-2-HYDROXYPROPANOIC ACID, 1,2-ETHANEDIOL, CARBON DIOXIDE, ...
Authors:Kanaujia, S.P, Mandal, S.K, Gogoi, P.
Deposit date:2021-06-25
Release date:2021-12-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Structural and thermodynamic insights into a novel Mg 2+ -citrate-binding protein from the ABC transporter superfamily.
Acta Crystallogr D Struct Biol, 77, 2021
7F6K
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BU of 7f6k by Molmil
Crystal structure of metal-citrate-binding protein (MctA) of ABC transporter endogenously bound to citrate
Descriptor: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ACETATE ION, ...
Authors:Kanaujia, S.P, Mandal, S.K, Gogoi, P.
Deposit date:2021-06-25
Release date:2021-12-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural and thermodynamic insights into a novel Mg 2+ -citrate-binding protein from the ABC transporter superfamily.
Acta Crystallogr D Struct Biol, 77, 2021
8T85
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BU of 8t85 by Molmil
Structure of RssB bound to beryllofluoride
Descriptor: BERYLLIUM TRIFLUORIDE ION, DI(HYDROXYETHYL)ETHER, MAGNESIUM ION, ...
Authors:Brugger, C, Schwartz, J, Deaconescu, A.M.
Deposit date:2023-06-21
Release date:2024-01-17
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:Structure of phosphorylated-like RssB, the adaptor delivering sigma s to the ClpXP proteolytic machinery, reveals an interface switch for activation.
J.Biol.Chem., 299, 2023
7CNQ
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BU of 7cnq by Molmil
Crystal structure of Agrobacterium tumefaciens aconitase X (holo-form)
Descriptor: (2~{S},3~{R})-3-oxidanylpyrrolidine-2-carboxylic acid, FE2/S2 (INORGANIC) CLUSTER, cis-3-hydroxy-L-proline dehydratase
Authors:Murase, Y, Watanabe, Y, Watanabe, S.
Deposit date:2020-08-03
Release date:2021-06-16
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures of aconitase X enzymes from bacteria and archaea provide insights into the molecular evolution of the aconitase superfamily.
Commun Biol, 4, 2021
7QG9
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BU of 7qg9 by Molmil
Tail tip of siphophage T5 : common core proteins
Descriptor: Distal tail protein, L-shaped tail fiber protein p132, Minor tail protein, ...
Authors:Linares, R, Arnaud, C.A, Effantin, G, Darnault, C, Epalle, N, Boeri Erba, E, Schoehn, G, Breyton, C.
Deposit date:2021-12-07
Release date:2022-12-21
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.45 Å)
Cite:Structural basis of bacteriophage T5 infection trigger and E. coli cell wall perforation.
Sci Adv, 9, 2023
7CNR
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BU of 7cnr by Molmil
Crystal structure of Thermococcus kodakaraensis aconitase X (apo-form)
Descriptor: DUF521 domain-containing protein, FE3-S4 CLUSTER, UPF0107 protein TK1248
Authors:Murase, Y, Watanabe, Y, Watanabe, S.
Deposit date:2020-08-03
Release date:2021-06-16
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (3.39 Å)
Cite:Crystal structures of aconitase X enzymes from bacteria and archaea provide insights into the molecular evolution of the aconitase superfamily.
Commun Biol, 4, 2021
7CNP
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BU of 7cnp by Molmil
Crystal structure of Agrobacterium tumefaciens aconitase X (apo-form)
Descriptor: FE2/S2 (INORGANIC) CLUSTER, MAGNESIUM ION, cis-3-hydroxy-L-proline dehydratase
Authors:Murase, Y, Watanabe, Y, Watanabe, S.
Deposit date:2020-08-03
Release date:2021-06-16
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structures of aconitase X enzymes from bacteria and archaea provide insights into the molecular evolution of the aconitase superfamily.
Commun Biol, 4, 2021
7CNS
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BU of 7cns by Molmil
Crystal structure of Thermococcus kodakaraensis aconitase X (holo-form)
Descriptor: (3R)-3-HYDROXY-3-METHYL-5-(PHOSPHONOOXY)PENTANOIC ACID, DUF521 domain-containing protein, FE3-S4 CLUSTER, ...
Authors:Murase, Y, Watanabe, Y, Watanabe, S.
Deposit date:2020-08-03
Release date:2021-06-16
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.902 Å)
Cite:Crystal structures of aconitase X enzymes from bacteria and archaea provide insights into the molecular evolution of the aconitase superfamily.
Commun Biol, 4, 2021
5G3O
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BU of 5g3o by Molmil
Bacillus cereus formamidase (BceAmiF) inhibited with urea.
Descriptor: 1-ETHOXY-2-(2-ETHOXYETHOXY)ETHANE, DI(HYDROXYETHYL)ETHER, FORMAMIDASE, ...
Authors:Gavira, J.A, Martinez-Rodriguez, S, Conejero-Muriel, M.
Deposit date:2016-04-29
Release date:2017-04-12
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:A novel cysteine carbamoyl-switch is responsible for the inhibition of formamidase, a nitrilase superfamily member.
Arch.Biochem.Biophys., 662, 2019
7CYH
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BU of 7cyh by Molmil
Binding interface of SARS-CoV-2 RBD and its neutralizing antibody HB27
Descriptor: Heavy chain of HB27, Light chain of HB27, Spike glycoprotein
Authors:Wang, X, Zhu, L.
Deposit date:2020-09-03
Release date:2021-06-09
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Binding interface of SARS-CoV-2 RBD and its neutralizing antibody HB27
To Be Published
7D2R
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BU of 7d2r by Molmil
Crystal structure of Agrobacterium tumefaciens aconitase X mutant - S449C/C510V
Descriptor: FE2/S2 (INORGANIC) CLUSTER, GLYCEROL, SODIUM ION, ...
Authors:Murase, Y, Watanabe, Y, Watanabe, S.
Deposit date:2020-09-17
Release date:2021-06-16
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.005 Å)
Cite:Crystal structures of aconitase X enzymes from bacteria and archaea provide insights into the molecular evolution of the aconitase superfamily.
Commun Biol, 4, 2021
6ZZ4
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BU of 6zz4 by Molmil
Crystal structure of the PTPN2 C216G mutant
Descriptor: PHOSPHATE ION, Tyrosine-protein phosphatase non-receptor type 2
Authors:Mechaly, A.E, Berthelet, J, Nian, Q, Parlato, M, Cerf-Bensussan, N, Haouz, A, Rodrigues-Lima, F.
Deposit date:2020-08-03
Release date:2021-08-18
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Structural characterization of a pathogenic mutant of human protein tyrosine phosphatase PTPN2 (Cys216Gly) that causes very early onset autoimmune enteropathy.
Protein Sci., 31, 2022
6I1M
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BU of 6i1m by Molmil
Secreted type 1 cystatin from Fasciola hepatica
Descriptor: Cystatin, IODIDE ION
Authors:Busa, M, Rezacova, P, Pachl, P, Stefanic, S, Mares, M.
Deposit date:2018-10-29
Release date:2020-08-26
Last modified:2023-03-29
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:An evolutionary molecular adaptation of an unusual stefin from the liver fluke Fasciola hepatica redefines the cystatin superfamily.
J.Biol.Chem., 299, 2023
8R7D
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BU of 8r7d by Molmil
Complex of rice blast (Magnaporthe oryzae) mutant effector protein PWL2-SNDE with the HMA domain of OsHIPP43 from rice (Oryza sativa)
Descriptor: Os01g0507700 protein, Pwl2 protein
Authors:Zdrzalek, R, Banfield, M.J.
Deposit date:2023-11-24
Release date:2024-01-31
Last modified:2024-07-17
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Bioengineering a plant NLR immune receptor with a robust binding interface toward a conserved fungal pathogen effector.
Proc.Natl.Acad.Sci.USA, 121, 2024
7DY9
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BU of 7dy9 by Molmil
Thermotoga maritima ferritin mutant-FLAL
Descriptor: Ferritin
Authors:Zhao, G, Zhang, X.
Deposit date:2021-01-20
Release date:2021-09-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.303 Å)
Cite:Protein interface redesign facilitates the transformation of nanocage building blocks to 1D and 2D nanomaterials.
Nat Commun, 12, 2021

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数据于2024-09-11公开中

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