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8P0N
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BU of 8p0n by Molmil
Cryo EM map and model of the vaccinia RNA polymerase intermediate pre-initiation open promoter complex shallow conformation
Descriptor: DNA-directed RNA polymerase 133 kDa polypeptide, DNA-directed RNA polymerase 147 kDa polypeptide, DNA-directed RNA polymerase 18 kDa subunit, ...
Authors:Grimm, C, Jungwirth, S, Fischer, U.
Deposit date:2023-05-10
Release date:2024-05-22
Method:ELECTRON MICROSCOPY (2.58 Å)
Cite:Cryo EM map and model of the vaccinia RNA polymerase intermediate pre-initiation open promoter complex (CASP target)
To Be Published
4WRF
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BU of 4wrf by Molmil
Crystal Structure of Surfactant Protein-A DEDN Mutant (E171D/P175E/R197N/K203D) Complexed with Mannose
Descriptor: CALCIUM ION, CHLORIDE ION, HEXANE-1,6-DIOL, ...
Authors:Rynkiewicz, M.J, Wu, H, Cafarella, T.R, Nikolaidis, N.M, Head, J.F, Seaton, B.A, McCormack, F.X.
Deposit date:2014-10-23
Release date:2016-02-10
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.901 Å)
Cite:Differential ligand binding specificities of the pulmonary collectins are determined by the conformational freedom of a surface loop
To be published
8P1Y
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BU of 8p1y by Molmil
Arabidopsis thaliana mutated variant C244S of seryl-tRNA synthetase
Descriptor: Serine--tRNA ligase, cytoplasmic
Authors:Kekez, I, Soic, R, Rokov-Plavec, J, Matkovic-Calogovic, D.
Deposit date:2023-05-13
Release date:2024-05-22
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Arabidopsis thaliana mutated variant C244S of seryl-tRNA synthetase
To Be Published
1BA8
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BU of 1ba8 by Molmil
THROMBIN INHIBITOR WITH A RIGID TRIPEPTIDYL ALDEHYDES
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, HIRUGEN, THROMBIN, ...
Authors:Krishnan, R, Zhang, E, Hakansson, K, Arni, R.K, Tulinsky, A, Lim-Wilby, M.S.L, Levy, O.E, Semple, J.E, Brunck, T.K.
Deposit date:1998-04-23
Release date:1999-04-27
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Highly selective mechanism-based thrombin inhibitors: structures of thrombin and trypsin inhibited with rigid peptidyl aldehydes.
Biochemistry, 37, 1998
8P1M
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BU of 8p1m by Molmil
Structure of hantaan orthohantavirus (HTNV) polymerase bound to 5'vRNA and NTP Mg
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, RNA (5'-R(P*AP*GP*UP*AP*G)-3'), ...
Authors:Keown, J.R, Carrique, L, Grimes, J.M.
Deposit date:2023-05-12
Release date:2024-05-22
Method:ELECTRON MICROSCOPY (3.23 Å)
Cite:Structure of hantaan orthohantavirus (HTNV) polymerase bound to 5'vRNA and NTP Mg
To Be Published
4WMW
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BU of 4wmw by Molmil
The structure of MBP-MCL1 bound to ligand 5 at 1.9A
Descriptor: 1,2-ETHANEDIOL, 2-hydroxy-5-(methylsulfanyl)benzoic acid, FORMIC ACID, ...
Authors:Clifton, M.C, Dranow, D.M.
Deposit date:2014-10-09
Release date:2015-05-06
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A Maltose-Binding Protein Fusion Construct Yields a Robust Crystallography Platform for MCL1.
Plos One, 10, 2015
8OW6
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BU of 8ow6 by Molmil
PERIDININ-CHLOROPHYLL-PROTEIN OF HETEROCAPSA PYGMAEA, 100K
Descriptor: CHLORIDE ION, CHLOROPHYLL A, PERIDININ, ...
Authors:Hofmann, E, Schulte, T.
Deposit date:2023-04-27
Release date:2024-05-15
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structural and Spectroscopic Characterization of the Peridinin-Chlorophyll a-Protein (PCP) Complex from Heterocapsa pygmaea (HPPCP)
To Be Published
8PBO
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BU of 8pbo by Molmil
Deep interactome learning for generative drug design
Descriptor: 3-[2-fluoranyl-4-[3-[2-fluoranyl-4-(5-methyl-1,3,4-thiadiazol-2-yl)phenoxy]propoxy]phenyl]propanoic acid, GLYCEROL, Peroxisome proliferator-activated receptor gamma, ...
Authors:Hakansson, M, Focht, D, Atz, K, Schneider, G.
Deposit date:2023-06-09
Release date:2024-05-15
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Prospective de novo drug design with deep interactome learning.
Nat Commun, 15, 2024
8P17
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BU of 8p17 by Molmil
E167K RF2 on E. coli 70S release complex with UGG (Structure II)
Descriptor: 1,4-DIAMINOBUTANE, 16S RNA, 23S rRNA, ...
Authors:Pundir, S, Larsson, D.S.D, Selmer, M, Sanyal, S.
Deposit date:2023-05-11
Release date:2024-05-22
Method:ELECTRON MICROSCOPY (2.78 Å)
Cite:The compensatory mechanism of a naturally evolved E167K RF2 counteracting the loss of RF1 in bacteria
To Be Published
8P1Z
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BU of 8p1z by Molmil
Arabidopsis thaliana cytosolic seryl-tRNA synthetase in addition of dithiothreitol (DTT)
Descriptor: Serine--tRNA ligase, cytoplasmic
Authors:Kekez, I, Soic, R, Rokov-Plavec, J, Matkovic-Calogovic, D.
Deposit date:2023-05-13
Release date:2024-05-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Arabidopsis thaliana cytosolic seryl-tRNA synthetase in addition of dithiothreitol (DTT)
To Be Published
8P5E
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BU of 8p5e by Molmil
S. cerevisiae nexus-sCMGE after DNA replication initiation
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Cell division control protein 45, ...
Authors:Henrikus, S.S, Willhoft, O.
Deposit date:2023-05-24
Release date:2024-05-29
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Unwinding of a eukaryotic origin of replication visualized by cryo-EM.
Nat.Struct.Mol.Biol., 2024
5IQZ
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BU of 5iqz by Molmil
Crystal structure of N-terminal domain of Human SIRT7
Descriptor: SIRT7 protein, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Thakur, K.G, Priyanka, A.
Deposit date:2016-03-11
Release date:2016-07-27
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.334 Å)
Cite:Crystal structure of the N-terminal domain of human SIRT7 reveals a three-helical domain architecture
Proteins, 84, 2016
8P63
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BU of 8p63 by Molmil
S. cerevisiae consensus-sCMGE on ssDNA after DNA replication initiation
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Cell division control protein 45, ...
Authors:Henrikus, S.S, Willhoft, O.
Deposit date:2023-05-25
Release date:2024-05-29
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Unwinding of a eukaryotic origin of replication visualized by cryo-EM.
Nat.Struct.Mol.Biol., 2024
8OVT
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BU of 8ovt by Molmil
Crystal structure of the ligand-free YeGT glycosyltransferase
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, YeGT glycosyltransferase
Authors:Wirth, C, Hunte, C.
Deposit date:2023-04-26
Release date:2024-05-15
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Tyrosine-modifying glycosylation by Yersinia effectors.
J.Biol.Chem., 300, 2024
8P62
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BU of 8p62 by Molmil
S. cerevisiae ssDNA-sCMGE after DNA replication initiation
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Cell division control protein 45, ...
Authors:Henrikus, S.S, Willhoft, O.
Deposit date:2023-05-25
Release date:2024-05-29
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Unwinding of a eukaryotic origin of replication visualized by cryo-EM.
Nat.Struct.Mol.Biol., 2024
8P2E
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BU of 8p2e by Molmil
Homotypic interacting B1 fab bound to Chondroitin Sulfate A
Descriptor: B1 fab heavy, B1 fab light
Authors:Raghavan, S.S.R, Dagil, R, Wang, K.T, Salanti, A.
Deposit date:2023-05-16
Release date:2024-06-05
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structure of homotypic B1 fabs bound to Chondroiting Sulfate A
To Be Published
8P5M
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BU of 8p5m by Molmil
SARS-CoV-2 Spike RBD in complex with Mab-23 (Fab)
Descriptor: Mab-23 (Heavy chain variable domain), Mab-23 (Light chain variable domain), Spike protein S1
Authors:Das, H, Hallberg, B.M.
Deposit date:2023-05-24
Release date:2024-06-05
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:SARS-CoV-2 Spike RBD in complex with Mab-23 (Fab domains)
To Be Published
8OLW
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BU of 8olw by Molmil
Structure of Oceanobacillus iheyensis group II intron before the first step of splicing in the presence of K+, Ca2+ and intronistat B
Descriptor: CALCIUM ION, Group IIC intron, POTASSIUM ION
Authors:Silvestri, I, Marcia, M.
Deposit date:2023-03-30
Release date:2024-06-19
Last modified:2024-07-03
Method:X-RAY DIFFRACTION (4 Å)
Cite:Targeting the conserved active site of splicing machines with specific and selective small molecule modulators.
Nat Commun, 15, 2024
4X0C
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BU of 4x0c by Molmil
Crystal structure of P domain from norovirus strain NSW0514 in complex with HBGA type Lex (triglycan)
Descriptor: 1,2-ETHANEDIOL, FORMIC ACID, VP1, ...
Authors:Singh, B.K, Hansman, G.S.
Deposit date:2014-11-21
Release date:2014-12-17
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Human noroviruses' fondness for histo-blood group antigens.
J.Virol., 89, 2015
4X1H
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BU of 4x1h by Molmil
Opsin/G(alpha) peptide complex stabilized by nonyl-glucoside
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose, C-terminal derived peptide of guanine nucleotide-binding protein G(t) subunit alpha-1, PALMITIC ACID, ...
Authors:Blankenship, E, Lodowski, D.T.
Deposit date:2014-11-24
Release date:2015-11-04
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:The High-Resolution Structure of Activated Opsin Reveals a Conserved Solvent Network in the Transmembrane Region Essential for Activation.
Structure, 23, 2015
7B3O
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BU of 7b3o by Molmil
Crystal structure of the SARS-CoV-2 RBD in complex with STE90-C11 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy Chain of Fab Fragment, Light Chain of Fab Fragment, ...
Authors:Kluenemann, T, Van den Heuvel, J.
Deposit date:2020-12-01
Release date:2020-12-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2 Å)
Cite:A SARS-CoV-2 neutralizing antibody selected from COVID-19 patients binds to the ACE2-RBD interface and is tolerant to most known RBD mutations.
Cell Rep, 36, 2021
8OLV
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BU of 8olv by Molmil
Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Mg2+ and ARN25850
Descriptor: 2-[2,6-bis(bromanyl)-3,4,5-tris(oxidanyl)phenyl]carbonyl-~{N}-(2-pyrrolidin-1-ylethyl)-1-benzofuran-5-carboxamide, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Group IIC intron, ...
Authors:Silvestri, I, Marcia, M.
Deposit date:2023-03-30
Release date:2024-06-19
Last modified:2024-07-03
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:Targeting the conserved active site of splicing machines with specific and selective small molecule modulators.
Nat Commun, 15, 2024
8P43
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BU of 8p43 by Molmil
Structure of the MHC class Ib molecule Qa-1b in complex with Q001 peptide
Descriptor: Beta-2-microglobulin, H-2 class I histocompatibility antigen, Qa-1b, ...
Authors:Sala, B.M, Achour, A.
Deposit date:2023-05-19
Release date:2024-06-12
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:MHC-E is a convergent checkpoint ligand for LILRB1 on macrophages and during inflammation for NKG2A on lymphocytes
To Be Published
8P2U
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BU of 8p2u by Molmil
Crystal structure of S6BE with Silicotungstic Acid (STA) polyoxometalate
Descriptor: Keggin (STA), S6BE
Authors:Wouters, S.M.L, Kamata, K, Vandebroek, L.
Deposit date:2023-05-16
Release date:2024-06-12
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal structure of S6BE with Silicotungstic Acid (STA) polyoxometalate
To be published
6Y6P
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BU of 6y6p by Molmil
Structure of Hantaan virus envelope glycoprotein Gn
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope polyprotein
Authors:Serris, A, Rey, F.A, Guardado-Calvo, P.
Deposit date:2020-02-27
Release date:2020-10-14
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.938 Å)
Cite:The Hantavirus Surface Glycoprotein Lattice and Its Fusion Control Mechanism.
Cell, 183, 2020

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数据于2024-08-21公开中

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