4ITQ
| Crystal structure of hypothetical protein SCO1480 bound to DNA | Descriptor: | 5'-D(P*CP*CP*GP*CP*GP*CP*GP*C)-3', 5'-D(P*GP*CP*GP*CP*GP*CP*GP*G)-3', Putative uncharacterized protein SCO1480 | Authors: | Guarne, A, Nanji, T, Gloyd, M, Swiercz, J.P, Elliot, M.A. | Deposit date: | 2013-01-18 | Release date: | 2013-03-27 | Last modified: | 2013-05-22 | Method: | X-RAY DIFFRACTION (2.7 Å) | Cite: | A novel nucleoid-associated protein specific to the actinobacteria. Nucleic Acids Res., 41, 2013
|
|
8ER8
| |
7N1N
| Prx in complex with ComR DNA-binding domain | Descriptor: | 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ComR, Prx | Authors: | Rutbeek, N.R, Prehna, G. | Deposit date: | 2021-05-27 | Release date: | 2021-07-28 | Last modified: | 2023-10-18 | Method: | X-RAY DIFFRACTION (1.6 Å) | Cite: | Molecular mechanism of quorum sensing inhibition in Streptococcus by the phage protein paratox. J.Biol.Chem., 297, 2021
|
|
6N37
| SegA-sym, conformation of TDP-43 low complexity domain segment A sym | Descriptor: | TAR DNA-binding protein 43 | Authors: | Cao, Q, Boyer, D.R, Sawaya, M.R, Eisenberg, D.S. | Deposit date: | 2018-11-14 | Release date: | 2019-06-26 | Last modified: | 2024-03-20 | Method: | ELECTRON MICROSCOPY (3.8 Å) | Cite: | Cryo-EM structures of four polymorphic TDP-43 amyloid cores. Nat.Struct.Mol.Biol., 26, 2019
|
|
6FVO
| Mutant DNA polymerase sliding clamp from Mycobacterium tuberculosis with bound P7 peptide | Descriptor: | Beta sliding clamp, CALCIUM ION, P7 peptide | Authors: | Martiel, I, Andre, C, Olieric, V, Guichard, G, Burnouf, D. | Deposit date: | 2018-03-04 | Release date: | 2019-04-10 | Last modified: | 2024-01-17 | Method: | X-RAY DIFFRACTION (2.689 Å) | Cite: | Peptide Interactions on Bacterial Sliding Clamps. Acs Infect Dis., 2019
|
|
4BDY
| PFV intasome with inhibitor XZ-89 | Descriptor: | 17 NUCLEOTIDE PREPROCESSED PFV DONOR DNA (TRANSFERRED STRAND), 19 NUCLEOTIDE PREPROCESSED PFV DONOR DNA (NON-TRANSFERRED STRAND), 2-(3-chloro-4-fluorobenzyl)-4,5-dihydroxy-1H-isoindole-1,3(2H)-dione, ... | Authors: | Hare, S, Cherepanov, P. | Deposit date: | 2012-10-08 | Release date: | 2012-10-31 | Last modified: | 2023-12-20 | Method: | X-RAY DIFFRACTION (2.52 Å) | Cite: | Activities, Crystal Structures and Molecular Dynamics of Dihydro-1H-Isoindole Derivatives, Inhibitors of HIV-1 Integrase. Acs Chem.Biol., 8, 2013
|
|
3CO3
| X-Ray Crystal Structure of a Monofunctional Platinum-DNA Adduct, cis-{Pt(NH3)2(pyridine)}2+ Bound to Deoxyguanosine in a Dodecamer Duplex | Descriptor: | 5'-D(*DCP*DCP*DTP*DCP*DTP*DCP*DGP*DTP*DCP*DTP*DCP*DC)-3', 5'-D(*DGP*DGP*DAP*DGP*DAP*DCP*DGP*DAP*DGP*DAP*DGP*DG)-3', cis-diammine(pyridine)chloroplatinum(II) | Authors: | Lovejoy, K.S, Todd, R.C, Zhang, S, McCormick, M.S, D'Aquino, J.A, Reardon, J.T, Sancar, A, Giacomini, K.M, Lippard, S.J. | Deposit date: | 2008-03-27 | Release date: | 2008-06-10 | Last modified: | 2024-02-21 | Method: | X-RAY DIFFRACTION (2.16 Å) | Cite: | cis-Diammine(pyridine)chloroplatinum(II), a monofunctional platinum(II) antitumor agent: Uptake, structure, function, and prospects. Proc.Natl.Acad.Sci.Usa, 105, 2008
|
|
2GIJ
| Q138F HincII bound to cognate DNA GTTAAC and Ca2+ | Descriptor: | 5'-D(*GP*CP*CP*GP*GP*TP*TP*AP*AP*CP*CP*GP*GP*C)-3', CALCIUM ION, SODIUM ION, ... | Authors: | Horton, N.C, Joshi, H.K. | Deposit date: | 2006-03-28 | Release date: | 2006-07-18 | Last modified: | 2024-02-14 | Method: | X-RAY DIFFRACTION (1.93 Å) | Cite: | Alteration of Sequence Specificity of the Type II Restriction Endonuclease HincII through an Indirect Readout Mechanism. J.Biol.Chem., 281, 2006
|
|
2GII
| Q138F HincII bound to cognate DNA GTTAAC | Descriptor: | 5'-D(*GP*CP*CP*GP*GP*TP*TP*AP*AP*CP*CP*GP*GP*C)-3', Type II restriction enzyme HincII | Authors: | Horton, N.C, Joshi, H.K. | Deposit date: | 2006-03-28 | Release date: | 2006-07-18 | Last modified: | 2024-02-14 | Method: | X-RAY DIFFRACTION (2.3 Å) | Cite: | Alteration of Sequence Specificity of the Type II Restriction Endonuclease HincII through an Indirect Readout Mechanism. J.Biol.Chem., 281, 2006
|
|
8Q5M
| |
2GIH
| Q138F HincII bound to cognate DNA GTCGAC and Ca2+ | Descriptor: | 5'-D(*GP*CP*CP*GP*GP*TP*CP*GP*AP*CP*CP*GP*GP*C)-3', CALCIUM ION, Type II restriction enzyme HincII | Authors: | Horton, N.C, Joshi, H.K, Etzkorn, C, Chatwell, L, Bitinaite, J. | Deposit date: | 2006-03-28 | Release date: | 2006-07-18 | Last modified: | 2024-02-14 | Method: | X-RAY DIFFRACTION (2.5 Å) | Cite: | Alteration of Sequence Specificity of the Type II Restriction Endonuclease HincII through an Indirect Readout Mechanism. J.Biol.Chem., 281, 2006
|
|
6U9Q
| |
4PII
| Crystal structure of hypothetical protein PF0907 from pyrococcus furiosus solved by sulfur SAD using Swiss light source data | Descriptor: | CHLORIDE ION, IMIDAZOLE, N-glycosylase/DNA lyase | Authors: | Weinert, T, Waltersperger, S, Olieric, V, Panepucci, E, Chen, L, Rose, J.P, Wang, M, Wang, B.C, Southeast Collaboratory for Structural Genomics (SECSG) | Deposit date: | 2014-05-08 | Release date: | 2014-12-10 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (2.17 Å) | Cite: | Fast native-SAD phasing for routine macromolecular structure determination. Nat.Methods, 12, 2015
|
|
1L1V
| UNUSUAL ACTD/DNA_TA COMPLEX STRUCTURE | Descriptor: | 5'-D(*GP*TP*CP*AP*CP*CP*GP*AP*C)-3', ACTINOMYCIN D | Authors: | Chou, S.-H, Chin, K.-H, Chen, F.-M. | Deposit date: | 2002-02-20 | Release date: | 2002-03-06 | Last modified: | 2024-07-10 | Method: | SOLUTION NMR | Cite: | Looped Out and Perpendicular: Deformation of Watson-Crick Base Pair Associated with Actinomycin D Binding. Proc.Natl.Acad.Sci.USA, 99, 2002
|
|
9DP4
| APE1 N174Q Product Complex with Abasic DNA | Descriptor: | DI(HYDROXYETHYL)ETHER, DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*C)-3'), DNA (5'-D(*GP*GP*AP*TP*CP*CP*GP*TP*CP*GP*GP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), ... | Authors: | DeHart, K.D, Hoitsma, N.M, Freudenthal, B.D. | Deposit date: | 2024-09-20 | Release date: | 2024-10-09 | Method: | X-RAY DIFFRACTION (2.25 Å) | Cite: | N174 Physically and Chemically Stabilizes the APE1 Endonuclease Reaction To Be Published
|
|
3OSG
| The structure of protozoan parasite Trichomonas vaginalis Myb2 in complex with MRE-1-12 DNA | Descriptor: | 5'-D(*AP*AP*AP*TP*AP*TP*CP*GP*TP*TP*AP*T)-3', 5'-D(*AP*TP*AP*AP*CP*GP*AP*TP*AP*TP*TP*T)-3', MYB21 | Authors: | Jiang, I, Tsai, C.K, Chen, S.C, Wang, S.H, Amiraslanov, I, Chang, C.F, Wu, W.J, Tai, J.H, Liaw, Y.C, Huang, T.H. | Deposit date: | 2010-09-09 | Release date: | 2011-08-03 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (1.997 Å) | Cite: | Molecular basis of the recognition of the ap65-1 gene transcription promoter elements by a Myb protein from the protozoan parasite Trichomonas vaginalis. Nucleic Acids Res., 39, 2011
|
|
6J9A
| Crystal structure of Arabidopsis thaliana VAL1 in complex with FLC DNA fragment | Descriptor: | B3 domain-containing transcription repressor VAL1, DNA (5'-D(*AP*AP*TP*CP*CP*AP*TP*GP*CP*AP*GP*AP*AP*TP*C)-3'), DNA (5'-D(*AP*TP*TP*CP*TP*GP*CP*AP*TP*GP*GP*AP*TP*TP*G)-3') | Authors: | Hu, H, Du, J. | Deposit date: | 2019-01-22 | Release date: | 2019-05-29 | Method: | X-RAY DIFFRACTION (2.915 Å) | Cite: | Embryonic resetting of the parental vernalized state by two B3 domain transcription factors in Arabidopsis. Nat.Plants, 5, 2019
|
|
6PQN
| Crystal structure of HzTransib transposase | Descriptor: | GLYCEROL, PHOSPHATE ION, Putative DNA-mediated transposase, ... | Authors: | Liu, C, Yang, Y, Schatz, D.G. | Deposit date: | 2019-07-09 | Release date: | 2019-10-09 | Last modified: | 2019-12-18 | Method: | X-RAY DIFFRACTION (3.01 Å) | Cite: | Structures of a RAG-like transposase during cut-and-paste transposition. Nature, 575, 2019
|
|
8VDC
| |
8VD8
| |
8VDE
| |
8VD4
| |
8VD5
| SaPI1 mature capsid structure without DNA | Descriptor: | Major capsid protein | Authors: | Mukherjee, A, Kizziah, J.L, Dokland, T. | Deposit date: | 2023-12-14 | Release date: | 2024-01-10 | Last modified: | 2024-01-17 | Method: | ELECTRON MICROSCOPY (3.2 Å) | Cite: | Structure of the Portal Complex from Staphylococcus aureus Pathogenicity Island 1 Transducing Particles In Situ and In Isolation. J.Mol.Biol., 436, 2023
|
|
2BJ3
| NIKR-apo | Descriptor: | CHLORIDE ION, MAGNESIUM ION, NICKEL RESPONSIVE REGULATOR | Authors: | Tahirov, T.H. | Deposit date: | 2005-01-28 | Release date: | 2005-04-08 | Last modified: | 2023-12-13 | Method: | X-RAY DIFFRACTION (2.2 Å) | Cite: | Structure of Pyrococcus Horikoshii Nikr: Nickel Sensing and Implications for the Regulation of DNA Recognition J.Mol.Biol., 348, 2005
|
|
8OX1
| Structure of TRF1core in complex with telomeric nucleosome | Descriptor: | Histone H2A type 1-C, Histone H2B type 1-C/E/F/G/I, Histone H3.1, ... | Authors: | Hu, H, van Roon, A.M.M, Ghanim, G.E, Ahsan, B, Oluwole, A, Peak-Chew, S, Robinson, C.V, Nguyen, T.H.D. | Deposit date: | 2023-04-28 | Release date: | 2023-08-30 | Last modified: | 2023-09-06 | Method: | ELECTRON MICROSCOPY (2.7 Å) | Cite: | Structural basis of telomeric nucleosome recognition by shelterin factor TRF1. Sci Adv, 9, 2023
|
|