PDB: 222624 resultsInfo pagesStatus searchChemie searchBIRD

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8X2K	a lipid receptor complex structure Descriptor: (Z)-N-(2-hydroxyethyl)octadec-9-enamide, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ... Authors: Geng, C, Yang, D, Jun, X. Deposit date: 2023-11-09 Release date: 2024-04-03 Method: ELECTRON MICROSCOPY (3.03 Å) Cite: a lipid receptor complex structure To Be Published
8X2J	Cryo-EM structure of the photosynthetic alternative complex III with a quinone inhibitor HQNO from Chloroflexus aurantiacus Descriptor: 1,3-bis(13-methyltetradecanoyloxy)propan-2-yl pentadecanoate, 2-HEPTYL-4-HYDROXY QUINOLINE N-OXIDE, Cytochrome c domain-containing protein, ... Authors: Xu, X. Deposit date: 2023-11-09 Release date: 2024-03-06 Method: ELECTRON MICROSCOPY (2.7 Å) Cite: Cryo-EM structure of HQNO-bound Alternative Complex III from the anoxygenic phototrophic bacterium Chloroflexus aurantiacus. Plant Cell, 2024
8X2I	Cryo-EM structure of the TcsL at pH 5.0 in its open conformation Descriptor: Cytotoxin-L, ZINC ION Authors: Zhan, X, Tao, L. Deposit date: 2023-11-09 Release date: 2023-12-13 Method: ELECTRON MICROSCOPY (2.5 Å) Cite: Structural dynamics of CROPs control stability and toxicity of Paeniclostridium sordellii lethal toxin Nat Commun, 2023
8X2H	Cryo-EM structure of the TcsL at pH 5.0 in its closed conformation Descriptor: Cytotoxin-L, ZINC ION Authors: Zhan, X, Tao, L. Deposit date: 2023-11-09 Release date: 2023-12-13 Method: ELECTRON MICROSCOPY (2.9 Å) Cite: Structural dynamics of CROPs control stability and toxicity of Paeniclostridium sordellii lethal toxin Nat Commun, 2023
8X2A	The Crystal Structure of BMX from Biortus. Descriptor: 1,2-ETHANEDIOL, 4-[(3S)-3-{[(2E)-but-2-enoyl]amino}piperidin-1-yl]-5-fluoro-2,3-dimethyl-1H-indole-7-carboxamide, CHLORIDE ION, ... Authors: Wang, F, Cheng, W, Yuan, Z, Lin, D, Pan, W. Deposit date: 2023-11-09 Release date: 2023-12-27 Method: X-RAY DIFFRACTION (1.3 Å) Cite: The Crystal Structure of BMX from Biortus. To Be Published
8X23	The Crystal Structure of MAPK13 from Biortus. Descriptor: 1,2-ETHANEDIOL, GLYCEROL, Mitogen-activated protein kinase 13 Authors: Wang, F, Cheng, W, Yuan, Z, Lin, D, Pan, W. Deposit date: 2023-11-09 Release date: 2023-12-27 Method: X-RAY DIFFRACTION (1.5 Å) Cite: The Crystal Structure of MAPK13 from Biortus. To Be Published
8X22	HIV-1 reverse transcriptase mutant Q151M/Y115F/F116Y/L74V:DNA:dGTP ternary complex Descriptor: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, DNA/RNA (38-MER), GLYCEROL, ... Authors: Yasutake, Y, Hattori, S.I, Mitsuya, H. Deposit date: 2023-11-09 Release date: 2024-07-17 Method: X-RAY DIFFRACTION (2.31 Å) Cite: Deviated binding of anti-HBV nucleoside analog E-CFCP-TP to the reverse transcriptase active site attenuates the effect of drug-resistant mutations. Sci Rep, 14, 2024
8X21	HIV-1 reverse transcriptase mutant Q151M/Y115F/F116Y/L74V:DNA:ETV-TP ternary complex Descriptor: DNA/RNA (38-MER), GLYCEROL, HIV-1 RT p51 subunit, ... Authors: Yasutake, Y, Hattori, S.I, Mitsuya, H. Deposit date: 2023-11-09 Release date: 2024-07-17 Method: X-RAY DIFFRACTION (2.33 Å) Cite: Deviated binding of anti-HBV nucleoside analog E-CFCP-TP to the reverse transcriptase active site attenuates the effect of drug-resistant mutations. Sci Rep, 14, 2024
8X20	HIV-1 reverse transcriptase mutant Q151M/Y115F/F116Y/L74V:DNA:E-CFCP-TP ternary complex Descriptor: DNA/RNA (38-MER), E-CFCP-triphosphate, GLYCEROL, ... Authors: Yasutake, Y, Hattori, S.I, Mitsuya, H. Deposit date: 2023-11-09 Release date: 2024-07-17 Method: X-RAY DIFFRACTION (2.7 Å) Cite: Deviated binding of anti-HBV nucleoside analog E-CFCP-TP to the reverse transcriptase active site attenuates the effect of drug-resistant mutations. Sci Rep, 14, 2024
8X1Z	HIV-1 reverse transcriptase mutant Q151M/Y115F/F116Y:DNA:E-CFCP-TP ternary complex Descriptor: DNA/RNA (38-MER), E-CFCP-triphosphate, GLYCEROL, ... Authors: Yasutake, Y, Hattori, S.I, Mitsuya, H. Deposit date: 2023-11-09 Release date: 2024-07-17 Method: X-RAY DIFFRACTION (2.62 Å) Cite: Deviated binding of anti-HBV nucleoside analog E-CFCP-TP to the reverse transcriptase active site attenuates the effect of drug-resistant mutations. Sci Rep, 14, 2024
8X1V	NMR structure of a bimolecular parallel G-quadruplex formed by AAGGG repeats from pathogenic RFC1 gene Descriptor: DNA (5'-D(*AP*AP*GP*GP*GP*AP*AP*GP*GP*GP*AP*A)-3') Authors: Wang, Y, Guo, P, Han, D. Deposit date: 2023-11-08 Release date: 2024-01-17 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Structural investigation of pathogenic RFC1 AAGGG pentanucleotide repeats reveals a role of G-quadruplex in dysregulated gene expression in CANVAS. Nucleic Acids Res., 52, 2024
8X1N	Cryo-EM structure of human alpha-fetoprotein Descriptor: Alpha-fetoprotein, PALMITIC ACID, ZINC ION, ... Authors: Liu, Z.M, Li, M.S, Wu, C, Liu, K. Deposit date: 2023-11-08 Release date: 2024-05-15 Method: ELECTRON MICROSCOPY (3.31 Å) Cite: Structural characteristics of alpha-fetoprotein, including N-glycosylation, metal ion and fatty acid binding sites. Commun Biol, 7, 2024
8X1H	Crystal structure of N-terminal domain of Nucleocapsid protein of SARS-CoV-2 Descriptor: GLYCEROL, Nucleoprotein Authors: Kumari, S, Gupta, G.D. Deposit date: 2023-11-07 Release date: 2023-11-22 Last modified: 2024-07-03 Method: X-RAY DIFFRACTION (2 Å) Cite: Unveiling potential inhibitors targeting the nucleocapsid protein of SARS-CoV-2: Structural insights into their binding sites. Int.J.Biol.Macromol., 273, 2024
8X1F	Crystal structure of an omega-transaminase mutant from Aspergillus terreus with in complex with PLP Descriptor: D-aminoacid aminotransferase-like PLP-dependent enzyme, PYRIDOXAL-5'-PHOSPHATE Authors: Hu, D, Lu, Z.Y, Xu, D.Z, He, Y.C. Deposit date: 2023-11-07 Release date: 2023-12-13 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Efficient bioamination with an w-transaminase mutant from Aspergillus terreus To Be Published
8X1D	Crystal structure of GH11 from Thermoanaerobacterium saccharolyticum (pH8.5) Descriptor: ACETATE ION, Endo-1,4-beta-xylanase Authors: Nam, K.H. Deposit date: 2023-11-07 Release date: 2023-11-22 Last modified: 2024-07-17 Method: X-RAY DIFFRACTION (1.95 Å) Cite: pH-Induced structural changes in xylanase GH11 from Thermoanaerobacterium saccharolyticum F1000Res, 2024
8X1C	Structure of nucleosome-bound SRCAP-C in the ADP-bound state Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Actin, ... Authors: Yu, J, Wang, Q, Yu, Z, Li, W, Wang, L, Xu, Y. Deposit date: 2023-11-06 Release date: 2024-03-06 Last modified: 2024-05-29 Method: ELECTRON MICROSCOPY (3.2 Å) Cite: Structural insights into histone exchange by human SRCAP complex. Cell Discov, 10, 2024
8X1A	Crystal structure of periplasmic G6P binding protein VcA0625 Descriptor: 6-O-phosphono-alpha-D-glucopyranose, Iron(III) ABC transporter, periplasmic iron-compound-binding protein Authors: Dasgupta, J, Saha, I. Deposit date: 2023-11-06 Release date: 2024-04-17 Last modified: 2024-05-22 Method: X-RAY DIFFRACTION (1.604 Å) Cite: Structural insights in to the atypical type-I ABC Glucose-6-phosphate importer VCA0625-27 of Vibrio cholerae. Biochem.Biophys.Res.Commun., 716, 2024
8X19	Structure of nucleosome-bound SRCAP-C in the ADP-BeFx-bound state Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Actin, ... Authors: Yu, J, Wang, Q, Yu, Z, Li, W, Wang, L, Xu, Y. Deposit date: 2023-11-06 Release date: 2024-03-06 Last modified: 2024-05-29 Method: ELECTRON MICROSCOPY (3.2 Å) Cite: Structural insights into histone exchange by human SRCAP complex. Cell Discov, 10, 2024
8X17	Cryo-EM structure of adenosine receptor A3AR bound to CF102 Descriptor: Adenosine receptor A3, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ... Authors: Cai, H, Xu, Y, Xu, H.E. Deposit date: 2023-11-06 Release date: 2024-04-24 Last modified: 2024-05-08 Method: ELECTRON MICROSCOPY (3.19 Å) Cite: Cryo-EM structures of adenosine receptor A 3 AR bound to selective agonists. Nat Commun, 15, 2024
8X16	Cryo-EM structure of adenosine receptor A3AR bound to CF101 Descriptor: Adenosine receptor A3, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ... Authors: Cai, H, Xu, Y, Xu, H.E. Deposit date: 2023-11-06 Release date: 2024-04-24 Last modified: 2024-05-08 Method: ELECTRON MICROSCOPY (3.29 Å) Cite: Cryo-EM structures of adenosine receptor A 3 AR bound to selective agonists. Nat Commun, 15, 2024
8X15	Structure of nucleosome-bound SRCAP-C in the apo state Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Actin, ... Authors: Yu, J, Wang, Q, Yu, Z, Li, W, Wang, L, Xu, Y. Deposit date: 2023-11-06 Release date: 2024-03-06 Last modified: 2024-05-29 Method: ELECTRON MICROSCOPY (3.2 Å) Cite: Structural insights into histone exchange by human SRCAP complex. Cell Discov, 10, 2024
8X0Y	Crystal structure of JM-1A in complex with SARS-CoV-2 RBD Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, Heavy chain of JM-1A Fab, ... Authors: Mohapatra, A, Chen, X. Deposit date: 2023-11-06 Release date: 2024-06-05 Last modified: 2024-07-03 Method: X-RAY DIFFRACTION (1.94 Å) Cite: The presence of broadly neutralizing anti-SARS-CoV-2 RBD antibodies elicited by primary series and booster dose of COVID-19 vaccine. Plos Pathog., 20, 2024
8X0X	Crystal structure of JE-5C in complex with SARS-CoV-2 RBD Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of JE-5C Fab, Light chain of JE-5C Fab, ... Authors: Mohapatra, A, Chen, X. Deposit date: 2023-11-06 Release date: 2024-06-05 Last modified: 2024-07-03 Method: X-RAY DIFFRACTION (3.45 Å) Cite: The presence of broadly neutralizing anti-SARS-CoV-2 RBD antibodies elicited by primary series and booster dose of COVID-19 vaccine. Plos Pathog., 20, 2024
8X0T	Frizzled8 CRD in complex with pF8_AC3 Fab Descriptor: Frizzled-8, pF8_AC3 Heavy chain, pF8_AC3 Light chain Authors: Li, N, Ge, Q. Deposit date: 2023-11-06 Release date: 2023-11-22 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Identification and functional validation of FZD8-specific antibodies. Int J Biol Macromol, 254, 2023
8X0S	Crystal structure of r(G4C2)2 Descriptor: POTASSIUM ION, RNA (5'-R(*GP*GP*GP*GP*CP*CP*GP*GP*GP*GP*C)-3') Authors: Geng, Y, Liu, C, Cai, Q, Zhu, G. Deposit date: 2023-11-05 Release date: 2024-06-19 Method: X-RAY DIFFRACTION (2.956 Å) Cite: Crystal structure of a tetrameric RNA G-quadruplex formed by hexanucleotide repeat expansions of C9orf72 in ALS/FTD. Nucleic Acids Res., 2024

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