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4JLZ
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BU of 4jlz by Molmil
Structure of porcine cGAS in complex with bound UTP
Descriptor: MAGNESIUM ION, URIDINE 5'-TRIPHOSPHATE, Uncharacterized protein, ...
Authors:Civril, F, Hopfner, K.P.
Deposit date:2013-03-13
Release date:2013-06-12
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Structural mechanism of cytosolic DNA sensing by cGAS
Nature, 498, 2013
7V5Y
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BU of 7v5y by Molmil
Crystal structure of hexameric complex of Sa2YoeB-Sa2YefM toxin-antitoxin from Staphylococcus aureus
Descriptor: Antitoxin, Putative mRNA interferase YoeB
Authors:Xue, L, Khan, M.H, Yue, J.
Deposit date:2021-08-18
Release date:2021-12-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:The two paralogous copies of the YoeB-YefM toxin-antitoxin module in Staphylococcus aureus differ in DNA binding and recognition patterns.
J.Biol.Chem., 298, 2022
7V5Z
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BU of 7v5z by Molmil
Crystal structure of heterotetrameric complex of Sa2YoeB-Sa2YefM toxin-antitoxin from Staphylococcus aureus
Descriptor: Antitoxin, Putative mRNA interferase YoeB
Authors:Xue, L, Khan, M.H, Yue, J.
Deposit date:2021-08-18
Release date:2021-12-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:The two paralogous copies of the YoeB-YefM toxin-antitoxin module in Staphylococcus aureus differ in DNA binding and recognition patterns.
J.Biol.Chem., 298, 2022
1STZ
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BU of 1stz by Molmil
Crystal structure of a hypothetical protein at 2.2 A resolution
Descriptor: Heat-inducible transcription repressor hrcA homolog
Authors:Liu, J, Adams, P.D, Shin, D.-H, Huang, C, Yokota, H, Jancarik, J, Kim, R, Kim, S.-H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2004-03-25
Release date:2004-08-24
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of a heat-inducible transcriptional repressor HrcA from Thermotoga maritima: structural insight into DNA binding and dimerization.
J.Mol.Biol., 350, 2005
4ODU
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BU of 4odu by Molmil
Unliganded Fab structure of lipid A-specific antibody S1-15
Descriptor: S1-15 Fab (IgG2b kappa) light chain, S1-15 Fab (IgG2b) heavy chain, SULFATE ION
Authors:Haji-Ghassemi, O, Evans, S.V.
Deposit date:2014-01-10
Release date:2015-06-24
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Structural Basis for Antibody Recognition of Lipid A: INSIGHTS TO POLYSPECIFICITY TOWARD SINGLE-STRANDED DNA.
J.Biol.Chem., 290, 2015
4Q2D
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BU of 4q2d by Molmil
Crystal Structure of CRISPR-Associated protein in complex with 2'-Deoxyadenosine 5'-Triphosphate
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, CRISPR-associated helicase Cas3, MAGNESIUM ION, ...
Authors:Gong, B, Shin, M, Sun, J, van der Oost, J, Kim, J.-S.
Deposit date:2014-04-07
Release date:2014-11-19
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.771 Å)
Cite:Molecular insights into DNA interference by CRISPR-associated nuclease-helicase Cas3.
Proc.Natl.Acad.Sci.USA, 111, 2014
6B0B
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BU of 6b0b by Molmil
Crystal structure of human APOBEC3H
Descriptor: APOBEC3H, MCherry, RNA (5'-R(*UP*AP*AP*AP*AP*AP*AP*A)-3'), ...
Authors:Shaban, N.M, Shi, K, Banerjee, S, Harris, R.S, Aihara, H.
Deposit date:2017-09-14
Release date:2017-10-25
Last modified:2019-12-04
Method:X-RAY DIFFRACTION (3.2800622 Å)
Cite:The Antiviral and Cancer Genomic DNA Deaminase APOBEC3H Is Regulated by an RNA-Mediated Dimerization Mechanism.
Mol. Cell, 69, 2018
6BBO
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BU of 6bbo by Molmil
Crystal structure of human APOBEC3H/RNA complex
Descriptor: APOBEC3H, GLYCEROL, MCherry fluorescent protein, ...
Authors:Shaban, N.M, Shi, K, Banerjee, S, Harris, R.S, Aihara, H.
Deposit date:2017-10-19
Release date:2018-01-10
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.428 Å)
Cite:The Antiviral and Cancer Genomic DNA Deaminase APOBEC3H Is Regulated by an RNA-Mediated Dimerization Mechanism.
Mol. Cell, 69, 2018
2CO5
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BU of 2co5 by Molmil
F93 FROM STIV, a winged-helix DNA-binding protein
Descriptor: VIRAL PROTEIN F93
Authors:Larson, E.T, Reiter, D, Lawrence, C.M.
Deposit date:2006-05-25
Release date:2006-05-31
Last modified:2019-05-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A Winged-Helix Protein from Sulfolobus Turreted Icosahedral Virus Points Toward Stabilizing Disulfide Bonds in the Intracellular Proteins of a Hyperthermophilic Virus.
Virology, 368, 2007
7FEO
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BU of 7feo by Molmil
Crystal structure of AtMBD5 MBD domain
Descriptor: Methyl-CpG-binding domain-containing protein 5, SULFATE ION
Authors:Zhou, M.Q, Wu, Z.B, Liu, K, Min, J.R, Structural Genomics Consortium (SGC)
Deposit date:2021-07-21
Release date:2021-12-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Family-wide Characterization of Methylated DNA Binding Ability of Arabidopsis MBDs.
J.Mol.Biol., 434, 2022
5TS1
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BU of 5ts1 by Molmil
Crystal structure of MHC-I H2-KD complexed with peptides of Mycobacterial tuberculosis (YYQSGLSIV)
Descriptor: 1,2-ETHANEDIOL, Beta-2-microglobulin, GLYCEROL, ...
Authors:Jiang, J, Natarajan, K, Margulies, D.
Deposit date:2016-10-27
Release date:2018-05-09
Last modified:2020-02-05
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:MHC-restricted Ag85B-specific CD8+T cells are enhanced by recombinant BCG prime and DNA boost immunization in mice.
Eur.J.Immunol., 2019
4P5U
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BU of 4p5u by Molmil
Crystal structure of TatD
Descriptor: Tat-linked quality control protein TatD
Authors:Chen, Y, Li, C.-L, Hsiao, Y.-Y, Duh, Y, Yuan, H.S.
Deposit date:2014-03-20
Release date:2014-08-27
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure and function of TatD exonuclease in DNA repair.
Nucleic Acids Res., 42, 2014
6JQ1
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BU of 6jq1 by Molmil
Crystal Structure of DdrO from Deinococcus geothermalis
Descriptor: LITHIUM ION, Transcriptional regulator, XRE family
Authors:Lu, H, Hua, Y, Zhao, Y.
Deposit date:2019-03-28
Release date:2019-08-28
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure and DNA damage-dependent derepression mechanism for the XRE family member DG-DdrO.
Nucleic Acids Res., 47, 2019
6WC0
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BU of 6wc0 by Molmil
Crystal structure of AceCas9 bound with guide RNA and DNA with 5'-NNNTC-3' PAM
Descriptor: CRISPR-associated endonuclease, Csn1 family, DNA (30-MER), ...
Authors:Li, H, Das, A.
Deposit date:2020-03-28
Release date:2020-11-18
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.61 Å)
Cite:The molecular basis for recognition of 5'-NNNCC-3' PAM and its methylation state by Acidothermus cellulolyticus Cas9.
Nat Commun, 11, 2020
5TRZ
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BU of 5trz by Molmil
Crystal structure of MHC-I H2-KD complexed with peptides of Mycobacterial tuberculosis (YQSGLSIVM)
Descriptor: 1,2-ETHANEDIOL, Beta-2-microglobulin, GLYCEROL, ...
Authors:Jiang, J, Natarajan, K, Margulies, D.
Deposit date:2016-10-27
Release date:2018-05-09
Last modified:2019-08-14
Method:X-RAY DIFFRACTION (2.247 Å)
Cite:MHC-restricted Ag85B-specific CD8+T cells are enhanced by recombinant BCG prime and DNA boost immunization in mice.
Eur.J.Immunol., 2019
6WBR
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BU of 6wbr by Molmil
Crystal structure of AceCas9 bound with guide RNA and DNA with 5'-NNNCC-3' PAM
Descriptor: CRISPR-associated endonuclease, Csn1 family,CRISPR-associated endonuclease, Csn1 family, ...
Authors:Li, H, Das, A.
Deposit date:2020-03-27
Release date:2020-11-18
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.91 Å)
Cite:The molecular basis for recognition of 5'-NNNCC-3' PAM and its methylation state by Acidothermus cellulolyticus Cas9.
Nat Commun, 11, 2020
6X91
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BU of 6x91 by Molmil
Crystal structure of MBP-fused human APOBEC1
Descriptor: CACODYLATE ION, Maltodextrin-binding protein, C->U-editing enzyme APOBEC-1 chimera, ...
Authors:Wolfe, A.D, Li, S.-X, Chen, X.S.
Deposit date:2020-06-02
Release date:2020-12-09
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.51 Å)
Cite:The structure of APOBEC1 and insights into its RNA and DNA substrate selectivity.
NAR Cancer, 2, 2020
4ODT
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BU of 4odt by Molmil
Fab Structure of lipid A-specific antibody S1-15 in complex with lipid A carbohydrate backbone
Descriptor: 2-(2-METHOXYETHOXY)ETHANOL, 2-amino-2-deoxy-4-O-phosphono-beta-D-glucopyranose-(1-6)-2-amino-2-deoxy-1-O-phosphono-alpha-D-glucopyranose, S1-15 Fab (IgG2b kappa) light chain, ...
Authors:Haji-Ghassemi, O, Evans, S.V.
Deposit date:2014-01-10
Release date:2015-06-24
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural Basis for Antibody Recognition of Lipid A: INSIGHTS TO POLYSPECIFICITY TOWARD SINGLE-STRANDED DNA.
J.Biol.Chem., 290, 2015
3MX1
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BU of 3mx1 by Molmil
The structure of GIY-YIG endonuclease R.Eco29kI
Descriptor: Eco29kIR
Authors:Mak, A.N.S, Lambert, A.R, Stoddard, B.L.
Deposit date:2010-05-06
Release date:2010-09-08
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Folding, DNA Recognition, and Function of GIY-YIG Endonucleases: Crystal Structures of R.Eco29kI.
Structure, 18, 2010
4DOW
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BU of 4dow by Molmil
Structure of mouse ORC1 BAH domain bound to H4K20me2
Descriptor: Histone H4, Origin recognition complex subunit 1
Authors:Song, J, Patel, D.J.
Deposit date:2012-02-10
Release date:2012-03-07
Last modified:2012-04-11
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:The BAH domain of ORC1 links H4K20me2 to DNA replication licensing and Meier-Gorlin syndrome.
Nature, 484, 2012
4Q2C
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BU of 4q2c by Molmil
Crystal structure of CRISPR-associated protein
Descriptor: CRISPR-associated helicase Cas3, NICKEL (II) ION
Authors:Gong, B, Shin, M, Sun, J, van der Oost, J, Kim, J.-S.
Deposit date:2014-04-07
Release date:2014-11-19
Last modified:2022-08-24
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Molecular insights into DNA interference by CRISPR-associated nuclease-helicase Cas3.
Proc.Natl.Acad.Sci.USA, 111, 2014
3IHU
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BU of 3ihu by Molmil
Crystal structure of DNA binding protein (YP_298823.1) from Ralstonia eutropha JMP134 at 1.92 A resolution
Descriptor: CHLORIDE ION, GLYCEROL, Transcriptional regulator, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2009-07-30
Release date:2009-08-11
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Crystal structure of DNA binding protein (YP_298823.1) from Ralstonia eutropha JMP134 at 1.92 A resolution
To be published
2Q8U
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BU of 2q8u by Molmil
CRYSTAL STRUCTURE OF MRE11 FROM THERMOTOGA MARITIMA MSB8 (TM1635) AT 2.20 A RESOLUTION
Descriptor: Exonuclease, putative
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2007-06-11
Release date:2007-06-26
Last modified:2023-01-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of the first eubacterial Mre11 nuclease reveals novel features that may discriminate substrates during DNA repair.
J.Mol.Biol., 397, 2010
4O66
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BU of 4o66 by Molmil
Crystal Structure of SMARCAL1 HARP substrate recognition domain
Descriptor: SODIUM ION, SULFATE ION, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1
Authors:Mason, A.C, Eichman, B.F.
Deposit date:2013-12-20
Release date:2014-05-14
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A structure-specific nucleic acid-binding domain conserved among DNA repair proteins.
Proc.Natl.Acad.Sci.USA, 111, 2014
6TUN
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BU of 6tun by Molmil
Helicase domain complex
Descriptor: CDK-activating kinase assembly factor MAT1, CHLORIDE ION, General transcription and DNA repair factor IIH helicase subunit XPD
Authors:Sauer, F, Kisker, C.
Deposit date:2020-01-07
Release date:2020-11-11
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:In TFIIH the Arch domain of XPD is mechanistically essential for transcription and DNA repair.
Nat Commun, 11, 2020

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数据于2024-09-04公开中

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