PDB: 41930 resultsInfo pagesStatus searchChemie searchBIRD

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3KO8	Crystal Structure of UDP-galactose 4-epimerase Descriptor: NAD-dependent epimerase/dehydratase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, PHOSPHATE ION Authors: Sakuraba, H, Kawai, T, Yoneda, K, Ohshima, T. Deposit date: 2009-11-13 Release date: 2010-11-17 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Crystal structure of UDP-galactose 4-epimerase from the hyperthermophilic archaeon Pyrobaculum calidifontis Arch.Biochem.Biophys., 512, 2011
3KOF	Crystal structure of the double mutant F178Y/R181E of E.coli transaldolase B Descriptor: SULFATE ION, Transaldolase B Authors: Schneider, S, Gutierrez, M, Sandalova, T, Schneider, G, Clapes, P, Sprenger, G.A, Samland, A.K. Deposit date: 2009-11-13 Release date: 2010-02-23 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Redesigning the Active Site of Transaldolase TalB from Escherichia coli: New Variants with Improved Affinity towards Nonphosphorylated Substrates. Chembiochem, 11, 2010
3KP7	Staphylococcus epidermidis TcaR (apo form) Descriptor: Transcriptional regulator TcaR Authors: Chang, Y.M, Chen, C.K, Yeh, Y.J, Ko, T.P, Wang, A.H. Deposit date: 2009-11-15 Release date: 2010-06-09 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Structural study of TcaR and its complexes with multiple antibiotics from Staphylococcus epidermidis. Proc.Natl.Acad.Sci.USA, 107, 2010
3KO4	Crystal structure of D-Tyr-tRNA(Tyr) deacylase from Plasmodium falciparum in complex with ADP Descriptor: ADENOSINE-5'-DIPHOSPHATE, D-tyrosyl-tRNA(Tyr) deacylase Authors: Manickam, Y, Bhatt, T.K, Sharma, A. Deposit date: 2009-11-13 Release date: 2009-12-01 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (2.7 Å) Cite: Ligand-bound Structures Provide Atomic Snapshots for the Catalytic Mechanism of D-Amino Acid Deacylase J.Biol.Chem., 285, 2010
3KOC	DTD from Plasmodium falciparum in complex with D-Histidine Descriptor: D-HISTIDINE, D-tyrosyl-tRNA(Tyr) deacylase Authors: Manickam, Y, Bhatt, T.K, Sharma, A. Deposit date: 2009-11-13 Release date: 2009-12-08 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (2.91 Å) Cite: Ligand-bound Structures Provide Atomic Snapshots for the Catalytic Mechanism of D-Amino Acid Deacylase J.Biol.Chem., 285, 2010
3KP0	Crystal Structure of ORNITHINE 4,5 AMINOMUTASE in complex with 2,4-diaminobutyrate (DAB) (Aerobic) Descriptor: (2S)-2-amino-4-{[(1Z)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene]amino}butanoic acid, 5'-DEOXYADENOSINE, COBALAMIN, ... Authors: Wolthers, K.R, Levy, C.W, Scrutton, N.S, Leys, D. Deposit date: 2009-11-14 Release date: 2010-01-26 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Large-scale domain dynamics and adenosylcobalamin reorientation orchestrate radical catalysis in ornithine 4,5-aminomutase. J.Biol.Chem., 285, 2010
3KQV	Crystal Structure of hPNMT in Complex AdoHcy and Formanilide Descriptor: FORMANILIDE, Phenylethanolamine N-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE Authors: Drinkwater, N, Martin, J.L. Deposit date: 2009-11-17 Release date: 2010-09-29 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Fragment-based screening by X-ray crystallography, MS and isothermal titration calorimetry to identify PNMT (phenylethanolamine N-methyltransferase) inhibitors. Biochem.J., 431, 2010
3KTZ	Structure of GAP31 Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Ribosome-inactivating protein gelonin Authors: Kong, X.-P. Deposit date: 2009-11-26 Release date: 2010-01-26 Last modified: 2020-07-29 Method: X-RAY DIFFRACTION (1.6 Å) Cite: A new activity of anti-HIV and anti-tumor protein GAP31: DNA adenosine glycosidase--structural and modeling insight into its functions. Biochem.Biophys.Res.Commun., 391, 2010
5UC6	Structural insights into IL-1 alpha recognition by a naphthyl-modified aptamer that mimics IL-1RI Domain III Descriptor: DNA (5'-D(*CP*G)-R(P*(85Y))-D(P*GP*AP*G)-R(P*(85Y)P*(85Y))-D(P*A)-R(P*(85Y))-D(P*GP*GP*G)-R(P*(85Y)P*(85Y))-D(P*AP*GP*AP*G)-R(P*(85Y))-D(P*CP*GP*(ATD))-3'), Interleukin-1 alpha, MAGNESIUM ION, ... Authors: Ren, X, Pyle, A. Deposit date: 2016-12-21 Release date: 2017-10-11 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Structural basis for IL-1 alpha recognition by a modified DNA aptamer that specifically inhibits IL-1 alpha signaling. Nat Commun, 8, 2017
3KEY	Crystal structure of S. cerevisiae Stn1 C-terminal Descriptor: Protein STN1 Authors: Sun, J, Yu, E.Y, Yang, Y.T, Confer, L.A, Sun, S.H, Wan, K, Lue, N.F, Lei, M. Deposit date: 2009-10-26 Release date: 2009-12-22 Last modified: 2017-11-01 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Stn1-Ten1 is an Rpa2-Rpa3-like complex at telomeres. Genes Dev., 23, 2009
3KFJ	Crystal Structure of the Grb2 SH2 Domain in Complex with a Flexible Ac-pY-E-N-NH2 Tripeptide Mimic Descriptor: CHLORIDE ION, Growth factor receptor-bound protein 2, MAGNESIUM ION, ... Authors: Clements, J.H. Deposit date: 2009-10-27 Release date: 2010-03-02 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.02 Å) Cite: Thermodynamic and structural effects of conformational constraints in protein-ligand interactions. Entropic paradoxy associated with ligand preorganization. J.Am.Chem.Soc., 131, 2009
3KIO	mouse RNase H2 complex Descriptor: Ribonuclease H2 subunit A, Ribonuclease H2 subunit B, Ribonuclease H2 subunit C Authors: Shaban, N, Harvey, S, Perrino, F.W, Hollis, T. Deposit date: 2009-11-02 Release date: 2009-11-17 Last modified: 2011-07-13 Method: X-RAY DIFFRACTION (2.9 Å) Cite: The structure of the mammalian RNase H2 complex provides insight into RNA:DNA hybrid processing to prevent immune dysfunction. J.Biol.Chem., 285, 2010
8EEG	C. ammoniagenes monoamine oxidase (MAO) bound to dopamine Descriptor: Amine oxidase, FLAVIN-ADENINE DINUCLEOTIDE, L-DOPAMINE Authors: Muellers, S.N, Allen, K.N. Deposit date: 2022-09-07 Release date: 2023-02-01 Last modified: 2024-05-22 Method: X-RAY DIFFRACTION (2.15 Å) Cite: Structural Insights into the Substrate Range of a Bacterial Monoamine Oxidase. Biochemistry, 62, 2023
8EEM	C. ammoniagenes monoamine oxidase (MAO) bound to norepinephrine Descriptor: Amine oxidase, FLAVIN-ADENINE DINUCLEOTIDE, Noradrenaline Authors: Muellers, S.N, Allen, K.N. Deposit date: 2022-09-07 Release date: 2023-02-01 Last modified: 2024-05-22 Method: X-RAY DIFFRACTION (1.56 Å) Cite: Structural Insights into the Substrate Range of a Bacterial Monoamine Oxidase. Biochemistry, 62, 2023
8EEH	C. ammoniagenes monoamine oxidase (MAO) bound to tryptamine Descriptor: 2-(1H-INDOL-3-YL)ETHANAMINE, Amine oxidase, FLAVIN-ADENINE DINUCLEOTIDE Authors: Muellers, S.N, Allen, K.N. Deposit date: 2022-09-07 Release date: 2023-02-01 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (1.78 Å) Cite: Structural Insights into the Substrate Range of a Bacterial Monoamine Oxidase. Biochemistry, 62, 2023
8EEO	C. ammoniagenes monoamine oxidase bound to cadaverine Descriptor: Amine oxidase, FLAVIN-ADENINE DINUCLEOTIDE, PENTANE-1,5-DIAMINE Authors: Muellers, S.N, Allen, K.N. Deposit date: 2022-09-07 Release date: 2023-02-01 Last modified: 2024-05-22 Method: X-RAY DIFFRACTION (1.94 Å) Cite: Structural Insights into the Substrate Range of a Bacterial Monoamine Oxidase. Biochemistry, 62, 2023
8EEF	C. ammoniagenes monoamine oxidase (MAO) bound to octopamine Descriptor: 4-(2R-AMINO-1-HYDROXYETHYL)PHENOL, 4-(2S-AMINO-1-HYDROXYETHYL)PHENOL, Amine oxidase, ... Authors: Muellers, S.N, Allen, K.N. Deposit date: 2022-09-07 Release date: 2023-02-01 Last modified: 2024-05-22 Method: X-RAY DIFFRACTION (2.21 Å) Cite: Structural Insights into the Substrate Range of a Bacterial Monoamine Oxidase. Biochemistry, 62, 2023
8EEN	C. ammoniagenes monoamine oxidase (MAO) C424S variant Descriptor: Amine oxidase, FLAVIN-ADENINE DINUCLEOTIDE Authors: Muellers, S.N, Allen, K.N. Deposit date: 2022-09-07 Release date: 2023-02-01 Last modified: 2024-05-22 Method: X-RAY DIFFRACTION (1.46 Å) Cite: Structural Insights into the Substrate Range of a Bacterial Monoamine Oxidase. Biochemistry, 62, 2023
8EEJ	C. ammoniagenes monoamine oxidase (MAO) C424S variant bound to dopamine Descriptor: Amine oxidase, FLAVIN-ADENINE DINUCLEOTIDE, L-DOPAMINE Authors: Muellers, S.N, Allen, K.N. Deposit date: 2022-09-07 Release date: 2023-02-01 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (1.54 Å) Cite: Structural Insights into the Substrate Range of a Bacterial Monoamine Oxidase. Biochemistry, 62, 2023
8EEI	Unbound C. ammoniagenes monoamine oxidase (MAO) Descriptor: Amine oxidase, FLAVIN-ADENINE DINUCLEOTIDE Authors: Muellers, S.N, Allen, K.N. Deposit date: 2022-09-07 Release date: 2023-02-01 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (1.78 Å) Cite: Structural Insights into the Substrate Range of a Bacterial Monoamine Oxidase. Biochemistry, 62, 2023
8EEK	C. ammoniagenes monoamine oxidase (MAO) bound to tyramine Descriptor: 4-(2-aminoethyl)phenol, Amine oxidase, FLAVIN-ADENINE DINUCLEOTIDE Authors: Muellers, S.N, Allen, K.N. Deposit date: 2022-09-07 Release date: 2023-02-01 Last modified: 2024-05-22 Method: X-RAY DIFFRACTION (1.51 Å) Cite: Structural Insights into the Substrate Range of a Bacterial Monoamine Oxidase. Biochemistry, 62, 2023
8EEL	C. ammoniagenes monoamine oxidase (MAO) bound to 5-aminopentanol Descriptor: 5-aminopentan-1-ol, Amine oxidase, FLAVIN-ADENINE DINUCLEOTIDE Authors: Muellers, S.N, Allen, K.N. Deposit date: 2022-09-07 Release date: 2023-02-01 Last modified: 2024-05-22 Method: X-RAY DIFFRACTION (1.97 Å) Cite: Structural Insights into the Substrate Range of a Bacterial Monoamine Oxidase. Biochemistry, 62, 2023
7WEM	Solid-state NMR Structure of TFo c-Subunit Ring Descriptor: ATP synthase subunit c Authors: Akutsu, H, Todokoro, Y, Kang, S.-J, Suzuki, T, Yoshida, M, Ikegami, T, Fujiwara, T. Deposit date: 2021-12-23 Release date: 2022-08-10 Last modified: 2024-05-15 Method: SOLID-STATE NMR Cite: Chemical Conformation of the Essential Glutamate Site of the c -Ring within Thermophilic Bacillus F o F 1 -ATP Synthase Determined by Solid-State NMR Based on its Isolated c -Ring Structure. J.Am.Chem.Soc., 144, 2022
5KJR	Crystal structure of the ADCC-potent antibody N60-i3 Fab in complex with HIV-1 Clade A/E gp120 W69A/S115W mutant and M48U1. Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, M48U1 CD4 MIMETIC PEPTIDE, ... Authors: Tolbert, W.D, Pazgier, M. Deposit date: 2016-06-20 Release date: 2016-07-20 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2.98 Å) Cite: A Highly Conserved gp120 Inner Domain Residue Modulates Env Conformation and Trimer Stability. J.Virol., 90, 2016
4OE6	Crystal Structure of Yeast ALDH4A1 Descriptor: Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial Authors: Tanner, J.J. Deposit date: 2014-01-11 Release date: 2014-02-19 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.951 Å) Cite: Structural Studies of Yeast Delta (1)-Pyrroline-5-carboxylate Dehydrogenase (ALDH4A1): Active Site Flexibility and Oligomeric State. Biochemistry, 53, 2014

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