PDB: 1466 resultsInfo pagesStatus searchChemie searchBIRD

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5TLA	Crystal structure of mouse ISG15 Descriptor: Ubiquitin-like protein ISG15 Authors: Goodwin, O.Y, Dzimianski, J.V, Daczkowski, C.M, Pegan, S.D. Deposit date: 2016-10-10 Release date: 2017-05-03 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (3.244 Å) Cite: Structural Insights into the Interaction of Coronavirus Papain-Like Proteases and Interferon-Stimulated Gene Product 15 from Different Species. J. Mol. Biol., 429, 2017
5TOG	Room temperature structure of ubiquitin variant u7ub25.2540 Descriptor: Polyubiquitin-B, SULFATE ION Authors: Biel, J.T, Thompson, M.C, Cunningham, C.N, Corn, J.E, Fraser, J.S. Deposit date: 2016-10-17 Release date: 2017-05-24 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (1.08 Å) Cite: Flexibility and Design: Conformational Heterogeneity along the Evolutionary Trajectory of a Redesigned Ubiquitin. Structure, 25, 2017
5TOF	Room temperature structure of ubiquitin variant u7ub25 Descriptor: Polyubiquitin-B, SULFATE ION Authors: Biel, J.T, Thompson, M.C, Cunningham, C.N, Corn, J.E, Fraser, J.S. Deposit date: 2016-10-17 Release date: 2017-05-24 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (1.12 Å) Cite: Flexibility and Design: Conformational Heterogeneity along the Evolutionary Trajectory of a Redesigned Ubiquitin. Structure, 25, 2017
5TR5	Solution structure of Serine 65 phosphorylated UBL domain from parkin Descriptor: E3 ubiquitin-protein ligase parkin Authors: Aguirre, J.D, Dunkerley, K.M, Mercier, P, Shaw, G.S. Deposit date: 2016-10-25 Release date: 2016-12-21 Last modified: 2023-06-14 Method: SOLUTION NMR Cite: Structure of phosphorylated UBL domain and insights into PINK1-orchestrated parkin activation. Proc. Natl. Acad. Sci. U.S.A., 114, 2017
8XEP	Crystal structure of a Legionella pneumophila type IV effector in complex with ubiquitin Descriptor: SULFATE ION, Type IV effector MavL, Ubiquitin Authors: Tan, J.X, Wang, X.F, Zhou, Y, Zhu, Y.Q. Deposit date: 2023-12-12 Release date: 2024-05-01 Method: X-RAY DIFFRACTION (2.95 Å) Cite: Crystal structure of a Legionella pneumophila type IV effector in complex with ubiquitin To Be Published
4EEW	Crystal structure of the Ubl domain of BAG6 Descriptor: Large proline-rich protein BAG6 Authors: Kozlov, G, LePage, K, Vinaik, R, Gehring, K. Deposit date: 2012-03-28 Release date: 2012-04-11 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (1.3 Å) Cite: Crystal structure of the Ubl domain of BAG6 To be Published
4GU2	Crystal structure of ubiquitin from Entamoeba histolytica to 1.35 Angstrom Descriptor: Ubiquitin Authors: Bosch, D.E, Siderovski, D.P. Deposit date: 2012-08-29 Release date: 2012-12-12 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (1.35 Å) Cite: Structural Determinants of Ubiquitin Conjugation in Entamoeba histolytica. J.Biol.Chem., 288, 2013
4GOC	Crystal structure of the Get5 ubiquitin-like domain Descriptor: Golgi to ER traffic protein 5 Authors: Chartron, J.W, VanderVelde, D.G, Clemons Jr, W.M. Deposit date: 2012-08-19 Release date: 2012-11-21 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Structures of the Sgt2/SGTA Dimerization Domain with the Get5/UBL4A UBL Domain Reveal an Interaction that Forms a Conserved Dynamic Interface. Cell Rep, 2, 2012
4GSW	Crystal structure of ubiquitin from Entamoeba histolytica to 2.15 Angstrom Descriptor: SULFATE ION, Ubiquitin Authors: Bosch, D.E, Siderovski, D.P. Deposit date: 2012-08-28 Release date: 2012-12-12 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2.15 Å) Cite: Structural Determinants of Ubiquitin Conjugation in Entamoeba histolytica. J.Biol.Chem., 288, 2013
2NBD	Solution structure of V26A mutant of Ubiquitin at pH 6.0 Descriptor: entity Authors: Surana, P, Das, R. Deposit date: 2016-02-04 Release date: 2016-05-18 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Observing a late folding intermediate of Ubiquitin at atomic resolution by NMR Protein Sci., 25, 2016
2NBU	Solution structure of the Rad23 ubiquitin-like (UBL) domain Descriptor: UV excision repair protein RAD23 Authors: Chen, X, Walters, K.J. Deposit date: 2016-03-12 Release date: 2016-07-20 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Structures of Rpn1 T1:Rad23 and hRpn13:hPLIC2 Reveal Distinct Binding Mechanisms between Substrate Receptors and Shuttle Factors of the Proteasome. Structure, 24, 2016
2NBE	Solution structure of V26A mutant of Ubiquitin at pH 2.0 Descriptor: entity Authors: Surana, P, Das, R. Deposit date: 2016-02-04 Release date: 2016-05-18 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Observing a late folding intermediate of Ubiquitin at atomic resolution by NMR Protein Sci., 25, 2016
2N7K	Unveiling the structural determinants of KIAA0323 binding preference for NEDD8 Descriptor: NEDD8, Protein KHNYN Authors: Santonico, E, Nepravishta, R, Mattioni, A, Valentini, E, Mandaliti, W, Procopio, R, Iannuccelli, M, Castagnoli, L, Polo, S, Paci, M, Cesareni, G. Deposit date: 2015-09-14 Release date: 2016-09-14 Last modified: 2024-05-01 Method: SOLUTION NMR Cite: Unveiling the structural determinants of KIAA0323 binding preference for NEDD8 To be Published
2N13	Complex structure of MyUb (1080-1122) of human Myosin VI with K63-diUb Descriptor: Ubiquitin, Unconventional myosin-VI Authors: He, F, Walters, K. Deposit date: 2015-03-20 Release date: 2016-03-09 Last modified: 2023-06-14 Method: SOLUTION NMR Cite: Myosin VI Contains a Compact Structural Motif that Binds to Ubiquitin Chains. Cell Rep, 14, 2016
2MSG	Solid-state NMR structure of ubiquitin Descriptor: Ubiquitin Authors: Lakomek, N, Habenstein, B, Loquet, A, Shi, C, Giller, K, Wolff, S, Becker, S, Fasshuber, H, Lange, A. Deposit date: 2014-08-04 Release date: 2015-02-18 Last modified: 2024-05-15 Method: SOLID-STATE NMR Cite: Structural heterogeneity in microcrystalline ubiquitin studied by solid-state NMR. Protein Sci., 24, 2015
2MQJ	Solution structure of ubiquitin-like protein from Caldiarchaeum subterraneum Descriptor: Ubiquitin-like protein Authors: Ye, K. Deposit date: 2014-06-22 Release date: 2015-06-24 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Solution structure of ubiquitin-like protein from Caldiarchaeum subterraneum To be Published
2N7D	Solution structure of the UBL domain of human Ddi2 Descriptor: Protein DDI1 homolog 2 Authors: Siva, M, Grantz Saskova, K, Veverka, V. Deposit date: 2015-09-08 Release date: 2016-07-20 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Human DNA-Damage-Inducible 2 Protein Is Structurally and Functionally Distinct from Its Yeast Ortholog. Sci Rep, 6, 2016
2OOB	crystal structure of the UBA domain from Cbl-b ubiquitin ligase in complex with ubiquitin Descriptor: E3 ubiquitin-protein ligase CBL-B, Ubiquitin Authors: Kozlov, G, Gehring, K. Deposit date: 2007-01-25 Release date: 2007-02-06 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Structural basis for ubiquitin-mediated dimerization and activation of the ubiquitin protein ligase Cbl-b. Mol.Cell, 27, 2007
2PE9	NMR Based Structure of the Open Conformation of LYS48-Linked Di-UBiquitin Using Experimental Global Rotational Diffusion Tensor from NMR Relaxation Measurements Descriptor: Ubiquitin Authors: Ryabov, Y, Fushman, D. Deposit date: 2007-04-02 Release date: 2007-07-10 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: Structural assembly of multidomain proteins and protein complexes guided by the overall rotational diffusion tensor. J.Am.Chem.Soc., 129, 2007
2PEA	NMR Based Structure of the Closed Conformation of LYS48-Linked Di-Ubiquitin Using Experimental Global Rotational Diffusion Tensor from NMR Relaxation Measurements Descriptor: Ubiquitin Authors: Ryabov, Y, Fushman, D. Deposit date: 2007-04-02 Release date: 2007-07-10 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: Structural assembly of multidomain proteins and protein complexes guided by the overall rotational diffusion tensor. J.Am.Chem.Soc., 129, 2007
2NR2	The MUMO (minimal under-restraining minimal over-restraining) method for the determination of native states ensembles of proteins Descriptor: Ubiquitin Authors: Richter, B, Gsponer, J, Varnai, P, Salvatella, X, Vendruscolo, M. Deposit date: 2006-11-01 Release date: 2007-05-08 Last modified: 2023-12-27 Method: SOLUTION NMR Cite: The MUMO (minimal under-restraining minimal over-restraining) method for the determination of native state ensembles of proteins J.Biomol.Nmr, 37, 2007
2OJR	Structure of ubiquitin solved by SAD using the Lanthanide-Binding Tag Descriptor: TERBIUM(III) ION, Ubiquitin Authors: Silvaggi, N.R, Allen, K.N. Deposit date: 2007-01-13 Release date: 2007-06-12 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (2.6 Å) Cite: Double-Lanthanide-Binding Tags for Macromolecular Crystallographic Structure Determination. J.Am.Chem.Soc., 129, 2007
2O6V	Crystal structure and solution NMR studies of Lys48-linked tetraubiquitin at neutral pH Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, SULFATE ION, Ubiquitin Authors: Eddins, M.J, Wolberger, C. Deposit date: 2006-12-08 Release date: 2007-02-13 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Crystal Structure and Solution NMR Studies of Lys48-linked Tetraubiquitin at Neutral pH J.Mol.Biol., 367, 2007
2RU6	The pure alternative state of ubiquitin Descriptor: Ubiquitin Authors: Kitazawa, S, Kameda, T, Kumo, A, Utsumi, M, Baxter, N, Kato, K, Williamson, M.P, Kitahara, R. Deposit date: 2013-12-04 Release date: 2014-02-12 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Close Identity between Alternatively Folded State N2 of Ubiquitin and the Conformation of the Protein Bound to the Ubiquitin-Activating Enzyme Biochemistry, 53, 2014
2RSU	Alternative structure of Ubiquitin Descriptor: Ubiquitin Authors: Kitazawa, S, Kameda, T, Yagi-Utsumi, M, Kato, K, Kitahara, R. Deposit date: 2012-06-15 Release date: 2013-03-27 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Solution Structure of the Q41N Variant of Ubiquitin as a Model for the Alternatively Folded N2 State of Ubiquitin Biochemistry, 52, 2013

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