PDB: 92800 resultsInfo pagesStatus searchChemie searchBIRD

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1H2G	Altered substrate specificity mutant of penicillin acylase Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, PENICILLIN G ACYLASE ALPHA SUBUNIT, ... Authors: McVey, C.E, Morillas, M, Brannigan, J.A, Ladurner, A.G, Forney, L.J, Virden, R. Deposit date: 2002-08-08 Release date: 2003-07-17 Last modified: 2023-12-13 Method: X-RAY DIFFRACTION (2 Å) Cite: Mutations of Penicillin Acylase Residue B71 Extend Substrate Specificity by Decreasing Steric Constraints for Substrate Binding Biochem.J., 371, 2003
1ORG	The crystal structure of a pheromone binding protein from the cockroach Leucophaea maderae reveals a new mechanism of pheromone binding Descriptor: GLYCEROL, pheromone binding protein Authors: Lartigue, A, Gruez, A, Spinelli, S, Riviere, S, Brossut, R, Tegoni, M, Cambillau, C. Deposit date: 2003-03-13 Release date: 2003-08-05 Last modified: 2011-07-13 Method: X-RAY DIFFRACTION (1.7 Å) Cite: THE CRYSTAL STRUCTURE OF A COCKROACH PHEROMONE-BINDING PROTEIN SUGGESTS A NEW LIGAND BINDING AND RELEASE MECHANISM J.Biol.Chem., 278, 2003
3BY8	Crystal Structure of the E.coli DcuS Sensor Domain Descriptor: (2S)-2-hydroxybutanedioic acid, Sensor protein dcuS Authors: Cheung, J, Hendrickson, W.A. Deposit date: 2008-01-15 Release date: 2008-08-12 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (1.45 Å) Cite: Crystal Structures of C4-Dicarboxylate Ligand Complexes with Sensor Domains of Histidine Kinases DcuS and DctB. J.Biol.Chem., 283, 2008
2ERQ	Crystal structure of vascular apoptosis-inducing protein-1(tetragonal crystal form) Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ... Authors: Takeda, S, Igarashi, T, Araki, S. Deposit date: 2005-10-25 Release date: 2006-06-20 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Crystal structures of VAP1 reveal ADAMs' MDC domain architecture and its unique C-shaped scaffold Embo J., 25, 2006
2CX8	Crystal structure of methyltransferase with ligand(SAH) Descriptor: S-ADENOSYL-L-HOMOCYSTEINE, methyl transferase Authors: Murayama, K, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2005-06-28 Release date: 2005-12-28 Last modified: 2011-07-13 Method: X-RAY DIFFRACTION (2.53 Å) Cite: Crystal structure of methyltransferase with ligand(SAH) To be Published
3GCK	Mode of ligand binding and assignment of subsites in mammalian peroxidases: crystal structure of lactoperoxidase complexes with acetyl salycylic acid, salicylhydroxamic acid and benzylhydroxamic acid Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BENZHYDROXAMIC ACID, CALCIUM ION, ... Authors: Singh, A.K, Singh, N, Sinha, M, Bhushan, A, Kaur, P, Srinivasan, A, Sharma, S, Singh, T.P. Deposit date: 2009-02-22 Release date: 2009-03-31 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.9 Å) Cite: Mode of ligand binding and assignment of subsites in mammalian peroxidases: crystal structure of lactoperoxidase complexes with acetyl salycylic acid, salicylhydroxamic acid and benzylhydroxamic acid To be Published
3GCJ	Mode of ligand binding and assignment of subsites in mammalian peroxidases: crystal structure of lactoperoxidase complexes with acetyl salycylic acid, salicylhydroxamic acid and benzylhydroxamic acid Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, IODIDE ION, ... Authors: Singh, A.K, Singh, N, Sinha, M, Kaur, P, Srinivasan, A, Sharma, S, Singh, T.P. Deposit date: 2009-02-22 Release date: 2009-03-31 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.34 Å) Cite: Mode of ligand binding and assignment of subsites in mammalian peroxidases: crystal structure of lactoperoxidase complexes with acetyl salycylic acid, salicylhydroxamic acid and benzylhydroxamic acid To be Published
3A8O	Crystal structure of Nitrile Hydratase complexed with Trimethylacetamide Descriptor: 2,2-dimethylpropanamide, FE (III) ION, Nitrile hydratase subunit alpha, ... Authors: Yamanaka, Y, Hashimoto, K, Ohtaki, A, Noguchi, K, Yohda, M, Odaka, M. Deposit date: 2009-10-07 Release date: 2010-04-14 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.47 Å) Cite: Kinetic and structural studies on roles of the serine ligand and a strictly conserved tyrosine residue in nitrile hydratase J.Biol.Inorg.Chem., 15, 2010
2FJY	Crystal Structure of B-form Bombyx mori Pheromone Binding Protein Descriptor: Pheromone-binding protein Authors: Lautenschlager, C, Leal, W.S, Clardy, J. Deposit date: 2006-01-03 Release date: 2006-01-17 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Coil-to-helix transition and ligand release of Bombyx mori pheromone-binding protein. Biochem.Biophys.Res.Commun., 335, 2005
3A64	Crystal structure of CcCel6C, a glycoside hydrolase family 6 enzyme, from Coprinopsis cinerea Descriptor: Cellobiohydrolase, MAGNESIUM ION Authors: Liu, Y, Yoshida, M, Kurakata, Y, Miyazaki, T, Nishikawa, A, Tonozuka, T. Deposit date: 2009-08-21 Release date: 2009-09-01 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Crystal structure of a glycoside hydrolase family 6 enzyme, CcCel6C, a cellulase constitutively produced by Coprinopsis cinerea Febs J., 277, 2010
2ERO	Crystal structure of vascular apoptosis-inducing protein-1(orthorhombic crystal form) Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, COBALT (III) ION, ... Authors: Takeda, S, Igarashi, T, Araki, S. Deposit date: 2005-10-25 Release date: 2006-06-20 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Crystal structures of VAP1 reveal ADAMs' MDC domain architecture and its unique C-shaped scaffold Embo J., 25, 2006
3A9B	CcCel6C, a glycoside hydrolase family 6 enzyme, complexed with cellobiose Descriptor: Cellobiohydrolase, MAGNESIUM ION, beta-D-glucopyranose, ... Authors: Liu, Y, Yoshida, M, Kurakata, Y, Miyazaki, T, Nishikawa, A, Tonozuka, T. Deposit date: 2009-10-22 Release date: 2009-11-03 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (1.2 Å) Cite: Crystal structure of a glycoside hydrolase family 6 enzyme, CcCel6C, a cellulase constitutively produced by Coprinopsis cinerea Febs J., 277, 2010
1EX7	CRYSTAL STRUCTURE OF YEAST GUANYLATE KINASE IN COMPLEX WITH GUANOSINE-5'-MONOPHOSPHATE Descriptor: GUANOSINE-5'-MONOPHOSPHATE, GUANYLATE KINASE, SULFATE ION Authors: Blaszczyk, J, Ji, X. Deposit date: 2000-05-01 Release date: 2001-03-16 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Crystal structure of unligated guanylate kinase from yeast reveals GMP-induced conformational changes. J.Mol.Biol., 307, 2001
3BRI	Crystal Structure of apo-LC8 Descriptor: ACETATE ION, Dynein light chain 1, cytoplasmic, ... Authors: Benison, G, Karplus, P.A, Barbar, E, Chiodo, M. Deposit date: 2007-12-21 Release date: 2008-12-02 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (1.7 Å) Cite: The Interplay of Ligand Binding and Quaternary Structure in the Diverse Interactions of Dynein Light Chain LC8. J.Mol.Biol., 384, 2008
3BY9	Crystal structure of the V. cholerae Histidine Kinase DctB Sensor Domain Descriptor: CALCIUM ION, SUCCINIC ACID, Sensor protein Authors: Cheung, J, Hendrickson, W.A. Deposit date: 2008-01-15 Release date: 2008-08-12 Last modified: 2017-10-25 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Crystal Structures of C4-Dicarboxylate Ligand Complexes with Sensor Domains of Histidine Kinases DcuS and DctB. J.Biol.Chem., 283, 2008
3GA5	X-ray structure of glucose/galactose receptor from Salmonella typhimurium in complex with (2R)-glyceryl-beta-D-galactopyranoside Descriptor: (2R)-2,3-dihydroxypropyl beta-D-galactopyranoside, CALCIUM ION, D-galactose-binding periplasmic protein, ... Authors: Sooriyaarachchi, S, Ubhayasekera, W, Mowbray, S.L. Deposit date: 2009-02-16 Release date: 2009-04-14 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (1.87 Å) Cite: X-ray structure of glucose/galactose receptor from Salmonella typhimurium in complex with the physiological ligand, (2R)-glyceryl-beta-D-galactopyranoside Febs J., 276, 2009
2D1O	Stromelysin-1 (MMP-3) complexed to a hydroxamic acid inhibitor Descriptor: CALCIUM ION, SM-25453, Stromelysin-1, ... Authors: Kohno, T, Hochigai, H, Yamashita, E, Tsukihara, T, Kanaoka, M. Deposit date: 2005-08-30 Release date: 2006-06-27 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (2.02 Å) Cite: Crystal structures of the catalytic domain of human stromelysin-1 (MMP-3) and collagenase-3 (MMP-13) with a hydroxamic acid inhibitor SM-25453 Biochem.Biophys.Res.Commun., 344, 2006
2M6N	3D solution structure of EMI1 (Early Mitotic Inhibitor 1) Descriptor: F-box only protein 5, ZINC ION Authors: Frye, J.J, Brown, N.G, Petzold, G, Watson, E.R, Royappa, G.R, Nourse, A, Jarvis, M, Kriwacki, R.W, Peters, J, Stark, H, Schulman, B.A. Deposit date: 2013-04-06 Release date: 2013-05-29 Last modified: 2024-05-01 Method: SOLUTION NMR Cite: Electron microscopy structure of human APC/C(CDH1)-EMI1 reveals multimodal mechanism of E3 ligase shutdown. Nat.Struct.Mol.Biol., 20, 2013
2FJS	Crystal Structure of Anaerobically Reduced Wild Type Nitrite Reductase from A. faecalis Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETATE ION, COPPER (I) ION, ... Authors: Tocheva, E.I, Murphy, M.E.P. Deposit date: 2006-01-03 Release date: 2006-11-21 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.85 Å) Cite: Effect of the methionine ligand on the reorganization energy of the type-1 copper site of nitrite reductase. J.Am.Chem.Soc., 129, 2007
8B66	Human Aldose Reductase Mutant A299G in Complex with a Ligand with an IDD Structure (3-({[2-(carboxymethoxy)-4-fluorobenzoyl]amino}methyl)benzoic acid) Descriptor: 3-({[2-(carboxymethoxy)-4-fluorobenzoyl]amino}methyl)benzoic acid, Aldo-keto reductase family 1 member B1, CITRIC ACID, ... Authors: Hubert, L.-S, Heine, A, Klebe, G. Deposit date: 2022-09-26 Release date: 2023-10-11 Method: X-RAY DIFFRACTION (0.95 Å) Cite: Human Aldose Reductase Mutant A299G in Complex with a Ligand with an IDD Structure (3-({[2-(carboxymethoxy)-4-fluorobenzoyl]amino}methyl)benzoic acid) To Be Published
2R16	Crystal Structure of bovine neurexin 1 alpha LNS/LG domain 4 (with no splice insert) Descriptor: CALCIUM ION, Neurexin-1-alpha Authors: Rudenko, G. Deposit date: 2007-08-22 Release date: 2008-03-25 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.04 Å) Cite: Regulation of Neurexin 1beta Tertiary Structure and Ligand Binding through Alternative Splicing Structure, 16, 2008
7NAS	Bacterial 30S ribosomal subunit assembly complex state A (multibody refinement for body domain of 30S ribosome) Descriptor: 16S rRNA, 30S ribosomal protein S11, 30S ribosomal protein S12, ... Authors: Schedlbauer, A, Iturrioz, I, Ochoa-Lizarralde, B, Diercks, T, Kaminishi, T, Capuni, R, Astigarraga, E, Gil-Carton, D, Fucini, P, Connell, S. Deposit date: 2021-01-25 Release date: 2021-07-07 Last modified: 2024-04-24 Method: ELECTRON MICROSCOPY (3.31 Å) Cite: A conserved rRNA switch is central to decoding site maturation on the small ribosomal subunit. Sci Adv, 7, 2021
8BVX	Structure of the mouse 8-oxoguanine DNA Glycosylase mOGG1 in complex with ligand TH13264 Descriptor: 1,2-ETHANEDIOL, N-glycosylase/DNA lyase, NICKEL (II) ION, ... Authors: Scaletti, E, Stenmark, P. Deposit date: 2022-12-05 Release date: 2024-05-15 Method: X-RAY DIFFRACTION (2.35 Å) Cite: Structure of the mouse 8-oxoguanine DNA Glycosylase mOGG1 in complex with ligand TH13264 To Be Published
1WRK	Crystal structure of the N-terminal domain of human cardiac troponin C in complex with trifluoperazine (orthrombic crystal form) Descriptor: 10-[3-(4-METHYL-PIPERAZIN-1-YL)-PROPYL]-2-TRIFLUOROMETHYL-10H-PHENOTHIAZINE, CALCIUM ION, Troponin C, ... Authors: Takeda, S, Igarashi, T, Oishi, Y, Mori, H. Deposit date: 2004-10-20 Release date: 2006-01-24 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (2.15 Å) Cite: Crystal structure of the N-terminal domain of human cardiac troponin C in complex with trifluoperazine To be Published
7NAU	Bacterial 30S ribosomal subunit assembly complex state C (Consensus Refinement) Descriptor: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... Authors: Schedlbauer, A, Iturrioz, I, Ochoa-Lizarralde, B, Diercks, T, Kaminishi, T, Capuni, R, Astigarraga, E, Gil-Carton, D, Fucini, P, Connell, S. Deposit date: 2021-01-25 Release date: 2021-12-08 Last modified: 2024-04-24 Method: ELECTRON MICROSCOPY (3.78 Å) Cite: A conserved rRNA switch is central to decoding site maturation on the small ribosomal subunit. Sci Adv, 7, 2021

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