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6FI8
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BU of 6fi8 by Molmil
Crystal structure of the IS608 transposase in complex with left end 29-mer DNA hairpin and a 6-mer DNA representing the intact target site: pre-cleavage target capture complex
Descriptor: CALCIUM ION, DNA 29-MER (LE29), DNA 6-MER (T6'), ...
Authors:Morero, N.R, Barabas, O.
Deposit date:2018-01-17
Release date:2018-03-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.598 Å)
Cite:Targeting IS608 transposon integration to highly specific sequences by structure-based transposon engineering.
Nucleic Acids Res., 46, 2018
4JWS
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BU of 4jws by Molmil
Crystal structure of Cytochrome P450cam-putidaredoxin complex
Descriptor: 1,1'-hexane-1,6-diyldipyrrolidine-2,5-dione, CALCIUM ION, Camphor 5-monooxygenase, ...
Authors:Tripathi, S.M, Li, H, Poulos, T.L.
Deposit date:2013-03-27
Release date:2013-06-19
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural basis for effector control and redox partner recognition in cytochrome P450.
Science, 340, 2013
3AH5
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BU of 3ah5 by Molmil
Crystal Structure of flavin dependent thymidylate synthase ThyX from helicobacter pylori complexed with FAD and dUMP
Descriptor: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, FLAVIN-ADENINE DINUCLEOTIDE, SULFATE ION, ...
Authors:Zhang, X, Zhang, J, Hu, Y, Zou, Q, Wang, D.
Deposit date:2010-04-14
Release date:2011-04-20
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure and functional analysis of a flavin dependent thymidylate synthase from helicobacter pylori
To be Published
2K1O
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BU of 2k1o by Molmil
NMR Structure of Helicobacter pylori JHP0511 (HP0564).
Descriptor: Putative
Authors:Borin, B.N, Krezel, A.M.
Deposit date:2008-03-11
Release date:2008-10-07
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structure of HP0564 from Helicobacter pylori identifies it as a new transcriptional regulator.
Proteins, 73, 2008
3NY0
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BU of 3ny0 by Molmil
Crystal Structure of UreE from Helicobacter pylori (Ni2+ bound form)
Descriptor: NICKEL (II) ION, Urease accessory protein ureE
Authors:Shi, R, Munger, C, Assinas, A, Matte, A, Cygler, M, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
Deposit date:2010-07-14
Release date:2010-08-25
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.09 Å)
Cite:Crystal Structures of Apo and Metal-Bound Forms of the UreE Protein from Helicobacter pylori: Role of Multiple Metal Binding Sites
Biochemistry, 49, 2010
3NXZ
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BU of 3nxz by Molmil
Crystal Structure of UreE from Helicobacter pylori (Cu2+ bound form)
Descriptor: COPPER (II) ION, Urease accessory protein ureE
Authors:Shi, R, Munger, C, Assinas, A, Matte, A, Cygler, M, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
Deposit date:2010-07-14
Release date:2010-08-25
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal Structures of Apo and Metal-Bound Forms of the UreE Protein from Helicobacter pylori: Role of Multiple Metal Binding Sites
Biochemistry, 49, 2010
3O1Q
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BU of 3o1q by Molmil
Native Crystal Structure of Helicobacter pylori Urease Accessory Protein UreF
Descriptor: Urease accessory protein ureF
Authors:Fong, Y.H, Chen, Y.W, Wong, K.B.
Deposit date:2010-07-21
Release date:2010-08-18
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Assembly of Preactivation Complex for Urease Maturation in Helicobacter pylori: CRYSTAL STRUCTURE OF UreF-UreH PROTEIN COMPLEX.
J.Biol.Chem., 286, 2011
8EX3
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BU of 8ex3 by Molmil
Plasmodium falciparum M1 in complex with inhibitor 9aa
Descriptor: GLYCEROL, M1 family aminopeptidase, MAGNESIUM ION, ...
Authors:Calic, P.P.S, McGowan, S, Webb, C.T.
Deposit date:2022-10-24
Release date:2023-01-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure-based development of potent Plasmodium falciparum M1 and M17 aminopeptidase selective and dual inhibitors via S1'-region optimisation.
Eur.J.Med.Chem., 248, 2022
8EYD
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BU of 8eyd by Molmil
Plasmodium falciparum M1 in complex with inhibitor 15ah
Descriptor: GLYCEROL, M1 family aminopeptidase, N-[(1R)-1-(4-bromophenyl)-2-(hydroxyamino)-2-oxoethyl]-N~2~-(4-fluorophenyl)glycinamide, ...
Authors:Calic, P.P.S, McGowan, S, Webb, C.T.
Deposit date:2022-10-26
Release date:2023-01-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Structure-based development of potent Plasmodium falciparum M1 and M17 aminopeptidase selective and dual inhibitors via S1'-region optimisation.
Eur.J.Med.Chem., 248, 2022
8EYE
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BU of 8eye by Molmil
Plasmodium falciparum M1 in complex with inhibitor 9aj
Descriptor: DIMETHYL SULFOXIDE, GLYCEROL, M1 family aminopeptidase, ...
Authors:Calic, P.P.S, McGowan, S, Webb, C.T.
Deposit date:2022-10-26
Release date:2023-01-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Structure-based development of potent Plasmodium falciparum M1 and M17 aminopeptidase selective and dual inhibitors via S1'-region optimisation.
Eur.J.Med.Chem., 248, 2022
8EWZ
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BU of 8ewz by Molmil
Plasmodium falciparum M1 in complex with inhibitor 9c
Descriptor: (2R)-2-(cyclopentylcarbamamido)-N-hydroxy-2-(3',4',5'-trifluoro[1,1'-biphenyl]-4-yl)acetamide, DIMETHYL SULFOXIDE, GLYCEROL, ...
Authors:Calic, P.P.S, McGowan, S, Webb, C.T.
Deposit date:2022-10-24
Release date:2023-01-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structure-based development of potent Plasmodium falciparum M1 and M17 aminopeptidase selective and dual inhibitors via S1'-region optimisation.
Eur.J.Med.Chem., 248, 2022
8EYF
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BU of 8eyf by Molmil
Plasmodium falciparum M1 in complex with inhibitor 15aa
Descriptor: DIMETHYL SULFOXIDE, GLYCEROL, M1 family aminopeptidase, ...
Authors:Calic, P.P.S, McGowan, S, Webb, C.T.
Deposit date:2022-10-26
Release date:2023-01-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure-based development of potent Plasmodium falciparum M1 and M17 aminopeptidase selective and dual inhibitors via S1'-region optimisation.
Eur.J.Med.Chem., 248, 2022
8EZ2
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BU of 8ez2 by Molmil
Plasmodium falciparum M1 in complex with inhibitor 15ag
Descriptor: DIMETHYL SULFOXIDE, GLYCEROL, M1 family aminopeptidase, ...
Authors:Calic, P.P.S, McGowan, S, Webb, C.T.
Deposit date:2022-10-31
Release date:2023-01-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Structure-based development of potent Plasmodium falciparum M1 and M17 aminopeptidase selective and dual inhibitors via S1'-region optimisation.
Eur.J.Med.Chem., 248, 2022
3OQG
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BU of 3oqg by Molmil
Restriction endonuclease HPY188I in complex with substrate DNA
Descriptor: CHLORIDE ION, DNA 5'-D(*GP*AP*TP*CP*TP*GP*AP*AP*C)-3', DNA 5'-D(*GP*TP*TP*CP*AP*GP*AP*TP*C)-3', ...
Authors:Sokolowska, M, Czapinska, H, Bochtler, M.
Deposit date:2010-09-03
Release date:2010-10-20
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Hpy188I-DNA pre- and post-cleavage complexes--snapshots of the GIY-YIG nuclease mediated catalysis.
Nucleic Acids Res., 39, 2011
3OR3
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BU of 3or3 by Molmil
Restriction endonuclease HPY188I in complex with product DNA
Descriptor: 5'-D(*GP*AP*TP*CP*T)-3', 5'-D(*GP*TP*TP*CP*A)-3', 5'-D(P*GP*AP*AP*C)-3', ...
Authors:Sokolowska, M, Czapinska, H, Bochtler, M.
Deposit date:2010-09-06
Release date:2010-10-20
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Hpy188I-DNA pre- and post-cleavage complexes--snapshots of the GIY-YIG nuclease mediated catalysis.
Nucleic Acids Res., 39, 2011
1RF9
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BU of 1rf9 by Molmil
Crystal structure of cytochrome P450-cam with a fluorescent probe D-4-AD (Adamantane-1-carboxylic acid-5-dimethylamino-naphthalene-1-sulfonylamino-butyl-amide)
Descriptor: 1,2-ETHANEDIOL, ADAMANTANE-1-CARBOXYLIC ACID-5-DIMETHYLAMINO-NAPHTHALENE-1-SULFONYLAMINO-BUTYL-AMIDE, Cytochrome P450-cam, ...
Authors:Hays, A.-M.A, Dunn, A.R, Gray, H.B, Stout, C.D, Goodin, D.B.
Deposit date:2003-11-07
Release date:2004-11-16
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Conformational States of Cytochrome P450cam Revealed by Trapping of synthetic Molecular Wires
J.Mol.Biol., 344, 2004
3QHP
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BU of 3qhp by Molmil
Crystal structure of the catalytic domain of cholesterol-alpha-glucosyltransferase from Helicobacter pylori
Descriptor: Type 1 capsular polysaccharide biosynthesis protein J (CapJ)
Authors:Lee, S.J, Lee, B.I, Suh, S.W.
Deposit date:2011-01-26
Release date:2011-06-29
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of the catalytic domain of cholesterol-alpha-glucosyltransferase from Helicobacter pylori
Proteins, 79, 2011
3PHI
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BU of 3phi by Molmil
Shikimate 5-Dehydrogenase (aroE) from Helicobacter pylori in complex with Shikimate and NADPH
Descriptor: (3R,4S,5R)-3,4,5-TRIHYDROXYCYCLOHEX-1-ENE-1-CARBOXYLIC ACID, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Shikimate dehydrogenase
Authors:Cheng, W.C, Lin, S.C, Wang, W.C.
Deposit date:2010-11-04
Release date:2011-11-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Shikimate 5-Dehydrogenase (aroE) from Helicobacter pylori in complex with Shikimate and NADPH
To be Published
3PHJ
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BU of 3phj by Molmil
Shikimate 5-Dehydrogenase (aroE) from Helicobacter pylori in complex with 3-Dehydroshikimate
Descriptor: 3-DEHYDROSHIKIMATE, Shikimate dehydrogenase
Authors:Cheng, W.C, Lin, S.C, Lin, C.H, Wang, W.C.
Deposit date:2010-11-04
Release date:2011-11-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Shikimate 5-Dehydrogenase (aroE) from Helicobacter pylori in complex with 3-Dehydroshikimate
To be Published
3QXX
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BU of 3qxx by Molmil
Crystal structure of dethiobiotin synthetase (BioD) from Helicobacter pylori complexed with GDP and 8-aminocaprylic acid
Descriptor: 1,2-ETHANEDIOL, 8-aminooctanoic acid, Dethiobiotin synthetase, ...
Authors:Porebski, P.J, Klimecka, M.M, Chruszcz, M, Murzyn, K, Joachimiak, A, Minor, W, Midwest Center for Structural Genomics (MCSG)
Deposit date:2011-03-02
Release date:2011-03-30
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:Structural characterization of Helicobacter pylori dethiobiotin synthetase reveals differences between family members.
Febs J., 279, 2012
3QDL
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BU of 3qdl by Molmil
Crystal structure of RdxA from Helicobacter pyroli
Descriptor: FLAVIN MONONUCLEOTIDE, GLYCEROL, Oxygen-insensitive NADPH nitroreductase
Authors:Rojas, A.L, Martinez-Julvez, M, Olekhnovich, I.N, Hoffman, P.S, Sancho, J.
Deposit date:2011-01-18
Release date:2012-01-18
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of RdxA--an oxygen-insensitive nitroreductase essential for metronidazole activation in Helicobacter pylori.
Febs J., 279, 2012
3QSI
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BU of 3qsi by Molmil
Nickel binding domain of NikR from Helicobacter pylori disclosing partial metal occupancy
Descriptor: NICKEL (II) ION, NikR nickel-responsive regulator, SULFATE ION
Authors:Gonzalez, J.M, Pozharski, E.
Deposit date:2011-02-21
Release date:2012-04-04
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.08 Å)
Cite:Ni(II) coordination to mixed sites modulates DNA binding of HpNikR via a long-range effect.
Proc.Natl.Acad.Sci.USA, 109, 2012
2MX0
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BU of 2mx0 by Molmil
Solution structure of HP0268 from Helicobacter pylori
Descriptor: Uncharacterized protein HP_0268
Authors:Lee, K.Y.
Deposit date:2014-12-05
Release date:2015-12-09
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure-based functional identification of Helicobacter pylori HP0268 as a nuclease with both DNA nicking and RNase activities
Nucleic Acids Res., 43, 2015
5LX3
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BU of 5lx3 by Molmil
CRYSTAL STRUCTURE OF VISFATIN IN COMPLEX WITH SAR154782.
Descriptor: 6-[4-[(6-azanylpyridin-3-yl)methylcarbamoylamino]-3-fluoranyl-phenyl]-2-(ethylamino)-~{N}-(2-piperidin-1-ylethyl)pyridine-3-carboxamide, Nicotinamide phosphoribosyltransferase
Authors:Bertrand, T, Marquette, J.P.
Deposit date:2016-09-20
Release date:2017-10-25
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:CRYSTAL STRUCTURE OF VISFATIN IN COMPLEX WITH SAR154782.
To Be Published
3QXH
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BU of 3qxh by Molmil
Crystal structure of dethiobiotin synthetase (BioD) from Helicobacter pylori complexed with ADP and 8-aminocaprylic acid
Descriptor: 1,2-ETHANEDIOL, 8-aminooctanoic acid, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Porebski, P.J, Klimecka, M.M, Chruszcz, M, Murzyn, K, Minor, C, Joachimiak, A, Minor, W, Midwest Center for Structural Genomics (MCSG)
Deposit date:2011-03-01
Release date:2011-03-30
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:Structural characterization of Helicobacter pylori dethiobiotin synthetase reveals differences between family members.
Febs J., 279, 2012

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数据于2024-10-02公开中

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