PDB: 59042 resultsInfo pagesStatus searchChemie searchBIRD

---

1A5I	CATALYTIC DOMAIN OF VAMPIRE BAT (DESMODUS ROTUNDUS) SALIVA PLASMINOGEN ACTIVATOR IN COMPLEX WITH EGR-CMK (GLU-GLY-ARG CHLOROMETHYL KETONE) Descriptor: L-alpha-glutamyl-N-{(1S)-4-{[amino(iminio)methyl]amino}-1-[(1S)-2-chloro-1-hydroxyethyl]butyl}glycinamide, PLASMINOGEN ACTIVATOR Authors: Renatus, M, Stubbs, M.T, Bode, W. Deposit date: 1998-02-17 Release date: 1999-03-23 Last modified: 2024-10-30 Method: X-RAY DIFFRACTION (2.9 Å) Cite: Catalytic domain structure of vampire bat plasminogen activator: a molecular paradigm for proteolysis without activation cleavage. Biochemistry, 36, 1997
4B93	Complex of Vamp7 cytoplasmic domain with 2nd ankyrin repeat domain of Varp Descriptor: ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 27, VESICLE-ASSOCIATED MEMBRANE PROTEIN 7 Authors: Schaefer, I.B, Owen, D.J, Luzio, J.P, Evans, P.R. Deposit date: 2012-08-31 Release date: 2012-10-31 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (2 Å) Cite: The Binding of Varp to Vamp7 Traps Vamp7 in a Closed, Fusogenically Inactive Conformation. Nat.Struct.Mol.Biol., 19, 2012
3GVB	AmpC beta-lactamase in complex with Fragment-based Inhibitor Descriptor: (3S)-1-(2-hydroxyphenyl)-5-oxopyrrolidine-3-carboxylic acid, Beta-lactamase, DIMETHYL SULFOXIDE, ... Authors: Teotico, D.T, Shoichet, B.K. Deposit date: 2009-03-30 Release date: 2009-04-14 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Docking for fragment inhibitors of AmpC beta-lactamase Proc.Natl.Acad.Sci.USA, 106, 2009
3GR2	AmpC beta-lactamase in complex with Fragment-based Inhibitor Descriptor: 4-ethyl-5-methyl-2-(1H-tetrazol-5-yl)-1,2-dihydro-3H-pyrazol-3-one, Beta-lactamase Authors: Teotico, D.T, Shoichet, B.K. Deposit date: 2009-03-24 Release date: 2009-04-14 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Docking for fragment inhibitors of AmpC beta-lactamase Proc.Natl.Acad.Sci.USA, 106, 2009
3GQZ	AmpC beta-lactamase in complex with Fragment-based Inhibitor Descriptor: (3S)-1-(4-acetylphenyl)-5-oxopyrrolidine-3-carboxylic acid, Beta-lactamase, DIMETHYL SULFOXIDE Authors: Teotico, D.T, Shoichet, B.K. Deposit date: 2009-03-24 Release date: 2009-04-14 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Docking for fragment inhibitors of AmpC beta-lactamase Proc.Natl.Acad.Sci.USA, 106, 2009
1LWU	Crystal structure of fragment D from lamprey fibrinogen complexed with the peptide Gly-His-Arg-Pro-amide Descriptor: 2-acetamido-2-deoxy-alpha-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... Authors: Yang, Z, Spraggon, G, Pandi, L, Everse, S.J, Riley, M, Doolittle, R.F. Deposit date: 2002-06-03 Release date: 2002-08-23 Last modified: 2024-12-25 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Crystal structure of fragment D from lamprey fibrinogen complexed with the peptide Gly-His-Arg-Pro-amide. Biochemistry, 41, 2002
3GRJ	AmpC beta-lactamase in complex with Fragment-based Inhibitor Descriptor: 2-phenyl-1H-imidazole-4-carboxylic acid, Beta-lactamase, DI(HYDROXYETHYL)ETHER, ... Authors: Teotico, D.T, Shoichet, B.K. Deposit date: 2009-03-25 Release date: 2009-04-14 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.49 Å) Cite: Docking for fragment inhibitors of AmpC beta-lactamase Proc.Natl.Acad.Sci.USA, 106, 2009
3GSG	AmpC beta-lactamase in complex with Fragment-based Inhibitor Descriptor: (2S)-2-[(3aR,4R,7S,7aS)-1,3-dioxooctahydro-2H-4,7-methanoisoindol-2-yl]propanoic acid, Beta-lactamase, DIMETHYL SULFOXIDE, ... Authors: Teotico, D.T, Shoichet, B.K. Deposit date: 2009-03-26 Release date: 2009-04-14 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Docking for fragment inhibitors of AmpC beta-lactamase Proc.Natl.Acad.Sci.USA, 106, 2009
3GKN	Insights into the Alkyl Peroxide Reduction Activity of Xanthomonas campestris Bacterioferritin Comigratory Protein from the Trapped Intermediate/Ligand Complex Structures Descriptor: Bacterioferritin comigratory protein, GLYCEROL, NAPHTHALENE-2,6-DISULFONIC ACID, ... Authors: Liao, S.-J. Deposit date: 2009-03-11 Release date: 2009-06-16 Last modified: 2024-11-06 Method: X-RAY DIFFRACTION (1.47 Å) Cite: Insights into the alkyl peroxide reduction pathway of Xanthomonas campestris bacterioferritin comigratory protein from the trapped intermediate-ligand complex structures J.Mol.Biol., 390, 2009
3GV9	AmpC beta-lactamase in complex with Fragment-based Inhibitor Descriptor: 3-(acetylamino)thiophene-2-carboxylic acid, Beta-lactamase, DI(HYDROXYETHYL)ETHER, ... Authors: Teotico, D.T, Shoichet, B.K. Deposit date: 2009-03-30 Release date: 2009-04-14 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Docking for fragment inhibitors of AmpC beta-lactamase Proc.Natl.Acad.Sci.USA, 106, 2009
3GKM	Insights into the Alkyl Peroxide Reduction Activity of Xanthomonas campestris Bacterioferritin Comigratory Protein from the Trapped Intermediate/Ligand Complex Structures Descriptor: Bacterioferritin comigratory protein, FORMIC ACID Authors: Liao, S.-J. Deposit date: 2009-03-11 Release date: 2009-06-16 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (1.53 Å) Cite: Insights into the alkyl peroxide reduction pathway of Xanthomonas campestris bacterioferritin comigratory protein from the trapped intermediate-ligand complex structures J.Mol.Biol., 390, 2009
4L4G	Structure of cyanide and camphor bound P450cam mutant L358P/K178G Descriptor: CAMPHOR, CYANIDE ION, Camphor 5-monooxygenase, ... Authors: Batabyal, D, Li, H, Poulos, T.L. Deposit date: 2013-06-07 Release date: 2013-07-31 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.55 Å) Cite: Synergistic Effects of Mutations in Cytochrome P450cam Designed To Mimic CYP101D1. Biochemistry, 52, 2013
4L49	Structure of L358A mutant of P450cam bound to camphor Descriptor: CAMPHOR, Camphor 5-monooxygenase, POTASSIUM ION, ... Authors: Batabyal, D, Li, H, Poulos, T.L. Deposit date: 2013-06-07 Release date: 2013-07-31 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.128 Å) Cite: Synergistic Effects of Mutations in Cytochrome P450cam Designed To Mimic CYP101D1. Biochemistry, 52, 2013
4L4B	Structure of L358A/K178G/D182N mutant of P450cam bound to camphor Descriptor: CAMPHOR, Camphor 5-monooxygenase, POTASSIUM ION, ... Authors: Batabyal, D, Li, H, Poulos, T.L. Deposit date: 2013-06-07 Release date: 2013-07-31 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.099 Å) Cite: Synergistic Effects of Mutations in Cytochrome P450cam Designed To Mimic CYP101D1. Biochemistry, 52, 2013
4L4A	Structure of L358A/K178G mutant of P450cam bound to camphor Descriptor: CAMPHOR, Camphor 5-monooxygenase, POTASSIUM ION, ... Authors: Batabyal, D, Li, H, Poulos, T.L. Deposit date: 2013-06-07 Release date: 2013-07-31 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.103 Å) Cite: Synergistic Effects of Mutations in Cytochrome P450cam Designed To Mimic CYP101D1. Biochemistry, 52, 2013
4L4F	Structure of cyanide and camphor bound P450cam mutant L358A/K178G/D182N Descriptor: CAMPHOR, CYANIDE ION, Camphor 5-monooxygenase, ... Authors: Batabyal, D, Li, H, Poulos, T.L. Deposit date: 2013-06-07 Release date: 2013-07-31 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.294 Å) Cite: Synergistic Effects of Mutations in Cytochrome P450cam Designed To Mimic CYP101D1. Biochemistry, 52, 2013
4L4C	Structure of L358P/K178G mutant of P450cam bound to camphor Descriptor: CAMPHOR, Camphor 5-monooxygenase, POTASSIUM ION, ... Authors: Batabyal, D, Li, H, Poulos, T.L. Deposit date: 2013-06-07 Release date: 2013-07-31 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Synergistic Effects of Mutations in Cytochrome P450cam Designed To Mimic CYP101D1. Biochemistry, 52, 2013
4L4D	Structure of cyanide and camphor bound P450cam mutant L358A Descriptor: CAMPHOR, CYANIDE ION, Camphor 5-monooxygenase, ... Authors: Batabyal, D, Li, H, Poulos, T.L. Deposit date: 2013-06-07 Release date: 2013-07-31 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.104 Å) Cite: Synergistic Effects of Mutations in Cytochrome P450cam Designed To Mimic CYP101D1. Biochemistry, 52, 2013
1N73	Fibrin D-Dimer, Lamprey complexed with the PEPTIDE LIGAND: GLY-HIS-ARG-PRO-AMIDE Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Fibrin alpha-1 chain, ... Authors: Yang, Z, Pandi, L, Doolittle, R.F. Deposit date: 2002-11-12 Release date: 2003-01-07 Last modified: 2024-12-25 Method: X-RAY DIFFRACTION (2.9 Å) Cite: The Crystal structure of fragment double-D from cross-linked lamprey fibrin reveals isopeptide linkages across an unexpected D-D interface Biochemistry, 41, 2002
6DRT	Crystal structure of the processivity clamp GP45 complexed with recognition peptide of ligase from bacteriophage T4 Descriptor: 1,2-ETHANEDIOL, DNA polymerase clamp, GP45 recognition loop Authors: Shi, K, Aihara, H. Deposit date: 2018-06-13 Release date: 2018-09-26 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (2.117 Å) Cite: T4 DNA ligase structure reveals a prototypical ATP-dependent ligase with a unique mode of sliding clamp interaction. Nucleic Acids Res., 46, 2018
4BXE	CRYSTAL STRUCTURE OF AMPDH3 FROM PSEUDOMONAS AERUGINOSA IN COMPLEX WITH ANHYDROMURAMIC PENTAPEPTIDE Descriptor: ACETATE ION, AMPDH3, ANHYDROMURAMIC PEPTIDE, ... Authors: Artola-Recolons, C, Hermoso, J.A. Deposit date: 2013-07-10 Release date: 2013-10-09 Last modified: 2024-05-01 Method: X-RAY DIFFRACTION (2.95 Å) Cite: Cell-Wall Remodeling by the Zinc-Protease Ampdh3 from Pseudomonas Aeruginosa. J.Am.Chem.Soc., 135, 2013
6EOE	Crystal structure of AMPylated GRP78 with nucleotide Descriptor: 78 kDa glucose-regulated protein, ADENOSINE-5'-DIPHOSPHATE, CITRATE ANION, ... Authors: Yan, Y, Preissler, S, Ron, D, Read, R.J. Deposit date: 2017-10-09 Release date: 2017-11-01 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (1.71 Å) Cite: AMPylation targets the rate-limiting step of BiP's ATPase cycle for its functional inactivation. Elife, 6, 2017
4BXD	CRYSTAL STRUCTURE OF AMPDH3 FROM PSEUDOMONAS AERUGINOSA IN COMPLEX WITH TETRASACCHARIDE PENTAPEPTIDE Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-methyl 2-acetamido-2-deoxy-beta-D-glucopyranoside, AMPDH3, PEPTIDE, ... Authors: Artola-Recolons, C, Hermoso, J.A. Deposit date: 2013-07-10 Release date: 2013-10-09 Last modified: 2024-10-16 Method: X-RAY DIFFRACTION (3.1 Å) Cite: Cell-Wall Remodeling by the Zinc-Protease Ampdh3 from Pseudomonas Aeruginosa. J.Am.Chem.Soc., 135, 2013
7KR9	Bifunctional enzyme GlmU bound to Zn(II) Descriptor: ACETYL COENZYME *A, Bifunctional protein GlmU, CALCIUM ION, ... Authors: Maher, M.J. Deposit date: 2020-11-19 Release date: 2021-12-01 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Dysregulation of Streptococcus pneumoniae zinc homeostasis breaks ampicillin resistance in a pneumonia infection model. Cell Rep, 38, 2022
6EOC	Crystal structure of AMPylated GRP78 in apo form (Crystal form 2) Descriptor: 78 kDa glucose-regulated protein, CITRATE ANION, SULFATE ION Authors: Yan, Y, Preissler, S, Ron, D, Read, R.J. Deposit date: 2017-10-09 Release date: 2017-11-01 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (1.67 Å) Cite: AMPylation targets the rate-limiting step of BiP's ATPase cycle for its functional inactivation. Elife, 6, 2017

<28293031323334353637383940414243>