PDB: 292 resultsInfo pagesStatus searchChemie searchBIRD

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4KSO	Crystal Structure of Circadian clock protein KaiB from S.Elongatus Descriptor: Circadian clock protein KaiB Authors: Pattanayek, R, Egli, M. Deposit date: 2013-05-17 Release date: 2013-07-10 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.622 Å) Cite: CryoEM and Molecular Dynamics of the Circadian KaiB-KaiC Complex Indicates KaiB Monomers Interact with KaiC and Block ATP Binding Clefts. J.Mol.Biol., 425, 2013
1SV1	NMR structure of the ThKaiA180C-CIIABD complex (25-structure ensemble) Descriptor: Circadian clock protein KaiA, Circadian clock protein KaiC Authors: Vakonakis, I, LiWang, A.C. Deposit date: 2004-03-26 Release date: 2004-08-03 Last modified: 2011-07-13 Method: SOLUTION NMR Cite: Structure of the C-terminal domain of the clock protein KaiA in complex with a KaiC-derived peptide: implications for KaiC regulation. Proc.Natl.Acad.Sci.Usa, 101, 2004
1SUY	NMR structure of the ThKaiA180C-CIIABD complex (average minimized structure) Descriptor: circadian clock protein KaiA, circadian clock protein KaiC Authors: Vakonakis, I, LiWang, A.C. Deposit date: 2004-03-26 Release date: 2004-08-03 Last modified: 2011-07-13 Method: SOLUTION NMR Cite: Structure of the C-terminal domain of the clock protein KaiA in complex with a KaiC-derived peptide: implications for KaiC regulation. Proc.Natl.Acad.Sci.Usa, 101, 2004
7S65	Compressed conformation of nighttime state KaiC Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Circadian clock protein kinase KaiC, ... Authors: Sandate, C.R, Swan, J.A, Partch, C.L, Lander, G.C. Deposit date: 2021-09-13 Release date: 2021-09-22 Last modified: 2024-06-05 Method: ELECTRON MICROSCOPY (3.2 Å) Cite: Coupling of distant ATPase domains in the circadian clock protein KaiC. Nat.Struct.Mol.Biol., 29, 2022
7S67	Extended conformation of daytime state KaiC Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Circadian clock protein kinase KaiC, ... Authors: Sandate, C.R, Swan, J.A, Partch, C.L, Lander, G.C. Deposit date: 2021-09-13 Release date: 2021-09-22 Last modified: 2024-06-05 Method: ELECTRON MICROSCOPY (3.8 Å) Cite: Coupling of distant ATPase domains in the circadian clock protein KaiC. Nat.Struct.Mol.Biol., 29, 2022
7S66	Extended conformation of nighttime state KaiC Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Circadian clock protein kinase KaiC, MAGNESIUM ION Authors: Sandate, C.R, Swan, J.A, Partch, C.L, Lander, G.C. Deposit date: 2021-09-13 Release date: 2021-09-22 Last modified: 2024-06-05 Method: ELECTRON MICROSCOPY (2.8 Å) Cite: Coupling of distant ATPase domains in the circadian clock protein KaiC. Nat.Struct.Mol.Biol., 29, 2022
4CT0	Crystal Structure of Mouse Cryptochrome1 in Complex with Period2 Descriptor: CHLORIDE ION, CRYPTOCHROME-1, HEXAETHYLENE GLYCOL, ... Authors: Schmalen, I, Rajan Prabu, J, Benda, C, Wolf, E. Deposit date: 2014-03-11 Release date: 2014-06-04 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (2.45 Å) Cite: Interaction of Circadian Clock Proteins Cry1 and Per2 is Modulated by Zinc Binding and Disulfide Bond Formation. Cell(Cambridge,Mass.), 157, 2014
5VJI	Crystal structure of the CLOCK Transcription Domain Exon19 in Complex with a Repressor Descriptor: CLOCK-interacting pacemaker, Circadian locomoter output cycles protein kaput Authors: Hou, Z, Su, L, Pei, J, Grishin, N.V, Zhang, H. Deposit date: 2017-04-19 Release date: 2017-06-07 Last modified: 2020-01-01 Method: X-RAY DIFFRACTION (1.86 Å) Cite: Crystal Structure of the CLOCK Transactivation Domain Exon19 in Complex with a Repressor. Structure, 25, 2017
5VJX	Crystal structure of the CLOCK Transcription Domain Exon19 in Complex with a Repressor Descriptor: CLOCK-interacting pacemaker, Circadian locomoter output cycles protein kaput Authors: Hou, Z, Su, L, Pei, J, Grishin, N.V, Zhang, H. Deposit date: 2017-04-20 Release date: 2017-12-06 Last modified: 2020-01-29 Method: X-RAY DIFFRACTION (2.695 Å) Cite: Crystal Structure of the CLOCK Transactivation Domain Exon19 in Complex with a Repressor. Structure, 25, 2017
6X61	Crystal structure of the N-terminal thioredoxin domain of SasA in complex with the N-terminal CI domain of KaiC from Thermosynchococcus elongatus Descriptor: Adaptive-response sensory-kinase SasA, Circadian clock protein kinase KaiC, PHOSPHATE ION Authors: Swan, J.A, Tripathi, S.M, Partch, C.L. Deposit date: 2020-05-27 Release date: 2021-06-02 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (3.2 Å) Cite: Reconstitution of an intact clock reveals mechanisms of circadian timekeeping. Science, 374, 2021
1V2Z	Crystal structure of the C-terminal domain of Thermosynechococcus elongatus BP-1 KaiA Descriptor: circadian clock protein KaiA homolog Authors: Uzumaki, T, Fujita, M, Nakatsu, T, Hayashi, F, Shibata, H, Itoh, N, Kato, H, Ishiura, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2003-10-20 Release date: 2004-06-01 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Crystal structure of the C-terminal clock-oscillator domain of the cyanobacterial KaiA protein NAT.STRUCT.MOL.BIOL., 11, 2004
5JYU	NMR structure of pseudo receiver domain of CikA from Thermosynechococcus elongatus Descriptor: Two-component sensor histidine kinase Authors: Tseng, R.D, LiWang, A.L. Deposit date: 2016-05-15 Release date: 2017-03-29 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Structural basis of the day-night transition in a bacterial circadian clock. Science, 355, 2017
1R5P	Crystal Structure Analysis of KaiB from PCC7120 Descriptor: circadian oscillation regulator Authors: Garces, R.G, Wu, N, Gillon, W, Pai, E.F. Deposit date: 2003-10-12 Release date: 2004-05-04 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Anabaena circadian clock proteins KaiA and KaiB reveal a potential common binding site to their partner KaiC Embo J., 23, 2004
1R5Q	Crystal Structure Analysis of Kai A from PCC7120 Descriptor: circadian oscillation regulator Authors: Garces, R.G, Wu, N, Gillon, W, Pai, E.F. Deposit date: 2003-10-12 Release date: 2004-05-04 Last modified: 2011-07-13 Method: X-RAY DIFFRACTION (2 Å) Cite: Anabaena circadian clock proteins KaiA and KaiB reveal a potential common binding site to their partner KaiC Embo J., 23, 2004
4H10	Intermolecular recognition revealed by the complex structure of human CLOCK-BMAL1 basic Helix-Loop-Helix domains with E-box DNA Descriptor: Aryl hydrocarbon receptor nuclear translocator-like protein 1, Circadian locomoter output cycles protein kaput, E-box DNA antisense strand, ... Authors: Wang, Z, Su, X.-D. Deposit date: 2012-09-10 Release date: 2012-12-26 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (2.402 Å) Cite: Intermolecular recognition revealed by the complex structure of human CLOCK-BMAL1 basic helix-loop-helix domains with E-box DNA. Cell Res., 23, 2013
4F3L	Crystal Structure of the Heterodimeric CLOCK:BMAL1 Transcriptional Activator Complex Descriptor: BMAL1b, Circadian locomoter output cycles protein kaput Authors: Huang, N, Chelliah, Y, Shan, Y, Taylor, C, Yoo, S, Partch, C, Green, C.B, Zhang, H, Takahashi, J. Deposit date: 2012-05-09 Release date: 2012-06-06 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (2.268 Å) Cite: Crystal structure of the heterodimeric CLOCK:BMAL1 transcriptional activator complex. Science, 337, 2012
8DD7	The Cryo-EM structure of Drosophila Cryptochrome in complex with Timeless Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Methylated-DNA--protein-cysteine methyltransferase,Cryptochrome-1 fusion, Protein timeless,Methylated-DNA--protein-cysteine methyltransferase fusion Authors: Feng, S, Lin, C, DeOliveira, C.C, Crane, B.R. Deposit date: 2022-06-17 Release date: 2023-02-15 Last modified: 2024-06-12 Method: ELECTRON MICROSCOPY (3.3 Å) Cite: Cryptochrome-Timeless structure reveals circadian clock timing mechanisms. Nature, 617, 2023
8FWJ	Structure of dodecameric KaiC-RS-S413E/S414E complexed with KaiB-RS solved by cryo-EM Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Circadian clock protein KaiB, ... Authors: Padua, R.A.P, Grant, T, Pitsawong, W, Hoemberger, M.S, Otten, R, Bradshaw, N, Grigorieff, N, Kern, D. Deposit date: 2023-01-22 Release date: 2023-03-22 Last modified: 2024-06-19 Method: ELECTRON MICROSCOPY (2.7 Å) Cite: From primordial clocks to circadian oscillators. Nature, 616, 2023
8DB3	Crystal structure of KaiC with truncated C-terminal coiled-coil domain Descriptor: ADENOSINE-5'-DIPHOSPHATE, Circadian clock protein KaiC Authors: Padua, R.A.P, Grant, T, Pitsawong, W, Hoemberger, M.S, Otten, R, Bradshaw, N, Grigorieff, N, Kern, D. Deposit date: 2022-06-14 Release date: 2023-03-22 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (2.9 Å) Cite: From primordial clocks to circadian oscillators. Nature, 616, 2023
8DBA	Crystal structure of dodecameric KaiC Descriptor: ADENOSINE-5'-DIPHOSPHATE, Circadian clock protein KaiC, MAGNESIUM ION Authors: Padua, R.A.P, Grant, T, Pitsawong, W, Hoemberger, M.S, Otten, R, Bradshaw, N, Grigorieff, N, Kern, D. Deposit date: 2022-06-14 Release date: 2023-03-22 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (3.5 Å) Cite: From primordial clocks to circadian oscillators. Nature, 616, 2023
8FWI	Structure of dodecameric KaiC-RS-S413E/S414E solved by cryo-EM Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Circadian clock protein KaiC, ... Authors: Padua, R.A.P, Grant, T, Pitsawong, W, Hoemberger, M.S, Otten, R, Bradshaw, N, Grigorieff, N, Kern, D. Deposit date: 2023-01-22 Release date: 2023-03-22 Last modified: 2024-06-19 Method: ELECTRON MICROSCOPY (2.9 Å) Cite: From primordial clocks to circadian oscillators. Nature, 616, 2023
1M2E	Solution structure of the N-terminal domain of Synechococcus elongatus KaiA (KaiA135N); Average minimized structure. Descriptor: KaiA Authors: Williams, S.B, Vakonakis, I, Golden, S.S, LiWang, A.C. Deposit date: 2002-06-23 Release date: 2002-11-13 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: Structure and Function from the Circadian Clock Protein KaiA of Synechococcus elongatus: A potential Clock Input Mechanism Proc.Natl.Acad.Sci.USA, 99, 2002
1M2F	Solution structure of the N-terminal domain of Synechococcus elongatus KaiA (KaiA135N); Family of 25 structures Descriptor: KaiA Authors: Williams, S.B, Vakonakis, I, Golden, S.S, LiWang, A.C. Deposit date: 2002-06-23 Release date: 2002-11-13 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: Structure and Function from the Circadian Clock Protein KaiA of Synechococcus elongatus: A potential Clock Input Mechanism Proc.Natl.Acad.Sci.USA, 99, 2002
8WV8	Crystal Structure of Cyanobacterial Circadian Clock Protein KaiC Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Circadian clock oscillator protein KaiC, MAGNESIUM ION Authors: Furuike, Y, Akiyama, S. Deposit date: 2023-10-23 Release date: 2023-12-27 Last modified: 2024-06-12 Method: X-RAY DIFFRACTION (2.93 Å) Cite: Structure-function relationship of KaiC around dawn. Biophys Physicobio., 21, 2024
8WVE	Crystal Structure of Cyanobacterial Circadian Clock Protein KaiC Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Circadian clock oscillator protein KaiC, MAGNESIUM ION Authors: Furuike, Y, Akiyama, S. Deposit date: 2023-10-23 Release date: 2023-12-27 Last modified: 2024-06-12 Method: X-RAY DIFFRACTION (2.729 Å) Cite: Structure-function relationship of KaiC around dawn. Biophys Physicobio., 21, 2024

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