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8DC9	RNA ligase RtcB from Pyrococcus horikoshii in complex with Mn2+ and GTP Descriptor: CHLORIDE ION, GUANOSINE-5'-TRIPHOSPHATE, MANGANESE (II) ION, ... Authors: Jacewicz, A, Dantuluri, S, Shuman, S. Deposit date: 2022-06-16 Release date: 2022-10-12 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (2.47 Å) Cite: Structures of RNA ligase RtcB in complexes with divalent cations and GTP. Rna, 28, 2022
485D	A SULFATE POCKET FORMED BY THREE GOU PAIRS IN THE STRUCTURE OF A NONAMERIC RNA Descriptor: RNA/DNA(5'-R(*CP*GP*UP*GP*AP*UP*CP*GP)-D(*C)-3'), SULFATE ION Authors: Masquida, B, Sauter, C, Westhof, E. Deposit date: 1999-08-13 Release date: 1999-12-18 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (0.97 Å) Cite: A sulfate pocket formed by three GoU pairs in the 0.97 A resolution X-ray structure of a nonameric RNA. RNA, 5, 1999
8AMN	Crystal structure of AUGUGGCAU duplex with strontium ions Descriptor: RNA (5'-R(*AP*UP*GP*UP*GP*GP*CP*AP*U)-3'), STRONTIUM ION Authors: Kiliszek, A, Rypniewski, W. Deposit date: 2022-08-03 Release date: 2022-11-23 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (2.46 Å) Cite: Structure and thermodynamics of a UGG motif interacting with Ba2+ and other metal ions: accommodating changes in the RNA structure and the presence of a G(syn)-G(syn) pair. Rna, 29, 2022
8AMK	Crystal structure of AUGUGGCAU duplex crystallized in the presence of calcium ions Descriptor: RNA (5'-R(*AP*UP*GP*UP*GP*GP*CP*AP*U)-3') Authors: Kiliszek, A, Rypniewski, W. Deposit date: 2022-08-03 Release date: 2022-11-23 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (2.85 Å) Cite: Structure and thermodynamics of a UGG motif interacting with Ba2+ and other metal ions: accommodating changes in the RNA structure and the presence of a G(syn)-G(syn) pair. Rna, 29, 2022
1E4P	Structure of the ribozyme substrate hairpin of Neurospora VS RNA. A close look at the cleavage site Descriptor: RNA (5'-R(*GP*UP*GP*CP*GP*AP*AP*GP*AP*CP*GP*AP*AP* AP*GP*UP*CP*CP*GP*AP*GP*CP*GP*C)-3') Authors: Michiels, P.J.A, Schouten, C.H.J, Heus, H.A, Hilbers, C.W. Deposit date: 2000-07-12 Release date: 2001-01-16 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Structure of the Ribozyme Substrate Hairpin of Neurospora Vs RNA: A Close Look at the Cleavage Site RNA, 6, 2000
2F3J	The solution structure of the REF2-I mRNA export factor (residues 1-155). Descriptor: RNA and export factor binding protein 2 Authors: Golovanov, A.P, Hautbergue, G.M, Wilson, S.A, Lian, L.Y. Deposit date: 2005-11-21 Release date: 2006-10-31 Last modified: 2024-05-29 Method: SOLUTION NMR Cite: The solution structure of REF2-I reveals interdomain interactions and regions involved in binding mRNA export factors and RNA. Rna, 12, 2006
1F78	SOLUTION STRUCTURE OF RNASE P RNA (M1 RNA) P4 STEM OLIGORIBONUCLEOTIDE COMPLEXED WITH COBALT (III) HEXAMINE, NMR, MINIMIZED AVERAGE STRUCTURE Descriptor: COBALT HEXAMMINE(III), RNASE P RNA RIBOZYME, P4 DOMAIN Authors: Schmitz, M, Tinoco Jr, I. Deposit date: 2000-06-26 Release date: 2000-10-09 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: Solution structure and metal-ion binding of the P4 element from bacterial RNase P RNA. RNA, 6, 2000
1F79	SOLUTION STRUCTURE OF RNASE P RNA (M1 RNA) P4 STEM C70U MUTANT OLIGORIBONUCLEOTIDE COMPLEXED WITH COBALT(III) HEXAMMINE, NMR, MINIMIZED AVERAGE STRUCTURE Descriptor: COBALT HEXAMMINE(III), RNASE P RNA RIBOZYME, P4 DOMAIN MUTANT Authors: Schmitz, M, Tinoco Jr, I. Deposit date: 2000-06-23 Release date: 2000-10-09 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: Solution structure and metal-ion binding of the P4 element from bacterial RNase P RNA. RNA, 6, 2000
1F7H	SOLUTION STRUCTURE OF THE RNASE P RNA (M1 RNA) P4 STEM OLIGORIBONUCLEOTIDE COMPLEXED WITH COBALT (III) HEXAMINE, NMR, ENSEMBLE OF 11 STRUCTURES Descriptor: COBALT HEXAMMINE(III), RNASE P RNA RIBOZYME, P4 DOMAIN Authors: Schmitz, M, Tinoco Jr, I. Deposit date: 2000-06-27 Release date: 2000-10-09 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: Solution structure and metal-ion binding of the P4 element from bacterial RNase P RNA. RNA, 6, 2000
1F7I	SOLUTION STRUCTURE OF THE RNASE P RNA (M1 RNA) P4 STEM C70U MUTANT OLIGORIBONUCLEOTIDE COMPLEXED WITH COBALT (III) HEXAMINE ,NMR, ENSEMBLE OF 12 STRUCTURES Descriptor: COBALT HEXAMMINE(III), RNASE P RNA RIBOZYME, P4 DOMAIN Authors: Schmitz, M, Tinoco Jr, I. Deposit date: 2000-06-27 Release date: 2000-10-09 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: Solution structure and metal-ion binding of the P4 element from bacterial RNase P RNA. RNA, 6, 2000
1F6X	SOLUTION STRUCTURE OF THE RNASE P RNA (M1 RNA) P4 STEM OLIGORIBONUCLEOTIDE Descriptor: RNASE P RNA RIBOZYME, P4 DOMAIN Authors: Schmitz, M, Tinoco Jr, I. Deposit date: 2000-06-23 Release date: 2000-10-09 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: Solution structure and metal-ion binding of the P4 element from bacterial RNase P RNA. RNA, 6, 2000
1F6Z	SOLUTION STRUCTURE OF THE RNASE P RNA (M1 RNA) P4 STEM C70U MUTANT OLIGORIBONUCLEOTIDE Descriptor: RNASE P RNA RIBOZYME, P4 DOMAIN MUTANT Authors: Schmitz, M, Tinoco Jr, I. Deposit date: 2000-06-24 Release date: 2000-10-09 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: Solution structure and metal-ion binding of the P4 element from bacterial RNase P RNA. RNA, 6, 2000
1F7F	SOLUTION STRUCTURE OF THE RNASE P RNA (M1 RNA) P4 STEM OLIGORIBONUCLEOTIDE, NMR, ENSEMBLE OF 9 STRUCTURES Descriptor: RNASE P RNA RIBOZYME, P4 DOMAIN Authors: Schmitz, M, Tinoco Jr, I. Deposit date: 2000-06-27 Release date: 2000-10-09 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: Solution structure and metal-ion binding of the P4 element from bacterial RNase P RNA. RNA, 6, 2000
1F7G	SOLUTION STRUCTURE OF THE RNASE P RNA (M1 RNA) P4 STEM C70U MUTANT OLIGORIBONUCLEOTIDE, ENSEMBLE OF 17 STRUCTURES Descriptor: RNASE P RNA RIBOZYME, P4 DOMAIN Authors: Schmitz, M, Tinoco Jr, I. Deposit date: 2000-06-27 Release date: 2000-10-09 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: Solution structure and metal-ion binding of the P4 element from bacterial RNase P RNA. RNA, 6, 2000
4XBF	Structure of LSD1:CoREST in complex with ssRNA Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, Lysine-specific histone demethylase 1A, ... Authors: Luka, Z, Loukachevitch, L.V, Martin, W.J, Wagner, C, Reiter, N.J. Deposit date: 2014-12-16 Release date: 2016-04-27 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (2.803 Å) Cite: G-quadruplex RNA binding and recognition by the lysine-specific histone demethylase-1 enzyme. RNA, 22, 2016
4NL3	Crystal Structure of Listeria monocytogenes Hfq in complex with U6 RNA Descriptor: 5'-R(*UP*UP*UP*UP*UP*U)-3', Protein hfq Authors: Kovach, A.R, Brennan, R.G. Deposit date: 2013-11-13 Release date: 2014-09-10 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (3.1 Å) Cite: Recognition of U-rich RNA by Hfq from the Gram-positive pathogen Listeria monocytogenes. Rna, 20, 2014
1WKS	Solution structure of an RNA stem-loop derived from the 3' conserved region of eel LINE UnaL2 Descriptor: 5'-R(*GP*GP*CP*UP*UP*UP*GP*GP*AP*UP*AP*AP*AP*AP*GP*CP*C)-3' Authors: Baba, S, Kajikawa, M, Okada, N, Kawai, G. Deposit date: 2004-06-04 Release date: 2004-06-22 Last modified: 2024-05-29 Method: SOLUTION NMR Cite: Solution structure of an RNA stem-loop derived from the 3' conserved region of eel LINE UnaL2 Rna, 10, 2004
7JJU	Crystal structure of en exoribonuclease-resistant RNA (xrRNA) from Potato leafroll virus (PLRV) Descriptor: CACODYLATE ION, Guanidinium, IRIDIUM HEXAMMINE ION, ... Authors: Steckelberg, A.-L, Vicens, Q, Auffinger, P, Costantino, D.C, Nix, J.C, Kieft, J.S. Deposit date: 2020-07-27 Release date: 2020-09-09 Last modified: 2024-03-06 Method: X-RAY DIFFRACTION (2.604 Å) Cite: The crystal structure of a Polerovirus exoribonuclease-resistant RNA shows how diverse sequences are integrated into a conserved fold. Rna, 26, 2020
6LLB	Crystal structure of mpy-RNase J (mutant S247A), an archaeal RNase J from Methanolobus psychrophilus R15, in complex with 6 nt RNA Descriptor: MPY-RNase J, RNA (5'-R(P*AP*AP*AP*AP*AP*A)-3'), SULFATE ION, ... Authors: Li, D.F, Hou, Y.J, Guo, L. Deposit date: 2019-12-22 Release date: 2020-01-01 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (2.6 Å) Cite: A newly identified duplex RNA unwinding activity of archaeal RNase J depends on processive exoribonucleolysis coupled steric occlusion by its structural archaeal loops. Rna Biol., 17, 2020
2W4S	novel RNA-binding domain in Cryptosporidium parvum at 2.5 angstrom resolution Descriptor: Ankyrin-repeat protein Authors: Varrot, A, Mackereth, C, Mourao, A, Sattler, M, Cusack, S. Deposit date: 2008-12-02 Release date: 2009-12-29 Last modified: 2024-05-01 Method: X-RAY DIFFRACTION (2.45 Å) Cite: Structure and RNA Recognition by the Snrna and Snorna Transport Factor Phax. RNA, 16, 2010
7PMM	DEAD-box helicase DbpA in the active conformation bound to a ss/dsRNA junction and ADP/BeF3 Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent RNA helicase DbpA, BERYLLIUM TRIFLUORIDE ION, ... Authors: Wurm, J.P. Deposit date: 2021-09-02 Release date: 2022-09-14 Last modified: 2024-05-01 Method: X-RAY DIFFRACTION (3 Å) Cite: Structural basis for RNA-duplex unwinding by the DEAD-box helicase DbpA. Rna, 29, 2023
5YDT	Remodeled Utp30 in 90S pre-ribosome (Mtr4-depleted, Enp1-TAP) Descriptor: 5' ETS RNA, Ribosome biogenesis protein UTP30, Saccharomyces cerevisiae strain ALI 308 18S ribosomal RNA gene, ... Authors: Ye, K, Zhu, X, Hu, J. Deposit date: 2017-09-14 Release date: 2017-11-01 Last modified: 2024-03-27 Method: ELECTRON MICROSCOPY (4.5 Å) Cite: Structure and RNA recognition of ribosome assembly factor Utp30. RNA, 23, 2017
7L0Z	Spinach variant bound to DFHBI-1T Descriptor: (5Z)-5-(3,5-difluoro-4-hydroxybenzylidene)-2-methyl-3-(2,2,2-trifluoroethyl)-3,5-dihydro-4H-imidazol-4-one, MAGNESIUM ION, PHOSPHATE ION, ... Authors: Truong, L, Trachman, R.J, Ferre-D'Amare, A.R. Deposit date: 2020-12-13 Release date: 2021-05-26 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Fluorogenic aptamers resolve the flexibility of RNA junctions using orientation-dependent FRET. Rna, 27, 2021
8FTO	E. coli 70S ribosome with an improved MS2 tag inserted in H98 Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... Authors: Nissley, A.J, Cate, J.H.D. Deposit date: 2023-01-12 Release date: 2023-08-02 Last modified: 2023-11-15 Method: ELECTRON MICROSCOPY (1.85 Å) Cite: Interactions between terminal ribosomal RNA helices stabilize the E. coli large ribosomal subunit. Rna, 29, 2023
6HCT	Crystal structure of Archeoglobus fulgidus L7Ae bound to its cognate UTR k-turn Descriptor: 50S ribosomal protein L7Ae, RNA (5'-R(*GP*CP*CP*GP*AP*UP*GP*AP*AP*UP*G)-3'), RNA (5'-R(*GP*CP*CP*GP*AP*UP*GP*AP*AP*UP*GP*CP*AP*UP*GP*AP*AP*GP*C)-3'), ... Authors: Huang, L, Lilley, D.M.J. Deposit date: 2018-08-16 Release date: 2018-10-31 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (3.091 Å) Cite: The role of RNA structure in translational regulation by L7Ae protein in archaea. RNA, 25, 2019

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