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1P98
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BU of 1p98 by Molmil
High-resolution NMR structure of the Ubl-domain of HHR23A
Descriptor: UV excision repair protein RAD23 homolog A
Authors:Mueller, T.D, Feigon, J.
Deposit date:2003-05-09
Release date:2003-10-07
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structural determinants for the binding of ubiquitin-like domains to the proteasome.
Embo J., 22, 2003
1P0R
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BU of 1p0r by Molmil
Solution Structure of UBL5 a human Ubiquitin-Like Protein
Descriptor: ubiquitin-like 5
Authors:McNally, T, Huang, Q, Janis, R.S, Liu, Z, Olejniczak, E.T, Reilly, R.M.
Deposit date:2003-04-10
Release date:2003-10-28
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structural analysis of UBL5, a novel ubiquitin-like modifier
Protein Sci., 12, 2003
1YQB
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BU of 1yqb by Molmil
Human Ubiquilin 3
Descriptor: Ubiquilin 3
Authors:Walker, J.R, Xue, S, Avvakumov, G.V, Newman, E.M, Mackenzie, F, Sundstrom, M, Arrowsmith, C, Edwards, A, Bochkarev, A, Dhe-Paganon, S, Structural Genomics Consortium (SGC)
Deposit date:2005-02-01
Release date:2005-02-08
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:The Ubiquitin-like domain of Human Ubiquilin 3
To be Published
1ZW7
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BU of 1zw7 by Molmil
Elimination of the C-cap in Ubiquitin Structure, Dynamics and Thermodynamic Consequences
Descriptor: Ubiquitin
Authors:Ermolenko, D.N, Dangi, B, Gronenborn, A.M, Makhatadze, G.I.
Deposit date:2005-06-03
Release date:2006-05-16
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Elimination of the C-cap in ubiquitin-structure, dynamics and thermodynamic consequences.
Biophys.Chem., 126, 2007
1ZKH
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BU of 1zkh by Molmil
Solution structure of a human ubiquitin-like domain in SF3A1
Descriptor: Splicing factor 3 subunit 1
Authors:Lukin, J.A, Dhe-Paganon, S, Guido, V, Lemak, A, Avvakumov, G.V, Xue, S, Newman, E.M, Mackenzie, F, Sundstrom, M, Edwards, A, Arrowsmith, C.H, Structural Genomics Consortium (SGC)
Deposit date:2005-05-02
Release date:2005-05-10
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of a human ubiquitin-like domain in SF3A1
To be Published
1YIW
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BU of 1yiw by Molmil
X-ray Crystal Structure of a Chemically Synthesized Ubiquitin
Descriptor: CADMIUM ION, CHLORIDE ION, Ubiquitin
Authors:Bang, D, Makhatadze, G.I, Tereshko, V, Kossiakoff, A.A, Kent, S.B.
Deposit date:2005-01-13
Release date:2005-06-14
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.39 Å)
Cite:X-ray Crystal Structure of a Chemically Synthesized [D-Gln35]Ubiquitin
Angew.Chem.Int.Ed.Engl., 44, 2005
1XQQ
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BU of 1xqq by Molmil
Simultaneous determination of protein structure and dynamics
Descriptor: ubiquitin
Authors:Lindorff-Larsen, K, Best, R.B, DePristo, M.A, Vendruscolo, M, Dobson, C.M.
Deposit date:2004-10-13
Release date:2005-02-08
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Simultaneous determination of protein structure and dynamics
Nature, 433, 2005
4PIJ
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BU of 4pij by Molmil
X-ray crystal structure of the K11S/K63S double mutant of ubiquitin
Descriptor: GLYCEROL, SULFATE ION, Ubiquitin
Authors:Loll, P.J, Xu, P.J, Schmidt, J, Melideo, S.L.
Deposit date:2014-05-08
Release date:2014-10-29
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Enhancing ubiquitin crystallization through surface-entropy reduction.
Acta Crystallogr.,Sect.F, 70, 2014
4PIH
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BU of 4pih by Molmil
X-ray crystal structure of the K33S mutant of ubiquitin
Descriptor: CALCIUM ION, CHLORIDE ION, Ubiquitin
Authors:Loll, P.J, Xu, P.J, Schmidt, J, Melideo, S.L.
Deposit date:2014-05-08
Release date:2014-10-29
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Enhancing ubiquitin crystallization through surface-entropy reduction.
Acta Crystallogr.,Sect.F, 70, 2014
2BGF
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BU of 2bgf by Molmil
NMR structure of Lys48-linked di-ubiquitin using chemical shift perturbation data together with RDCs and 15N-relaxation data
Descriptor: DI-UBIQUITIN
Authors:Van Dijk, A.D.J, Fushman, D, Bonvin, A.M.J.J.
Deposit date:2004-12-22
Release date:2005-08-31
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Various Strategies of Using Residual Dipolar Couplings in NMR-Driven Protein Docking: Application to Lys48-Linked Di-Ubiquitin and Validation Against 15N-Relaxation Data
Proteins: Struct., Funct., Bioinf., 60, 2005
4PIG
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BU of 4pig by Molmil
Crystal structure of the ubiquitin K11S mutant
Descriptor: CALCIUM ION, CHLORIDE ION, SODIUM ION, ...
Authors:Loll, P.J, Xu, P.J, Schmidt, J, Melideo, S.L.
Deposit date:2014-05-08
Release date:2014-10-29
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.952 Å)
Cite:Enhancing ubiquitin crystallization through surface-entropy reduction.
Acta Crystallogr.,Sect.F, 70, 2014
2BWF
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BU of 2bwf by Molmil
Crystal structure of the UBL domain of Dsk2 from S. cerevisiae
Descriptor: FORMIC ACID, UBIQUITIN-LIKE PROTEIN DSK2
Authors:Lowe, E.D, Hasan, N, Trempe, J.-F, Fonso, L, Noble, M.E.M, Endicott, J.A, Johnson, L.N, Brown, N.R.
Deposit date:2005-07-13
Release date:2006-01-25
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Structures of the Dsk2 Ubl and Uba Domains and Their Complex.
Acta Crystallogr.,Sect.D, 62, 2006
1Z2M
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BU of 1z2m by Molmil
Crystal Structure of ISG15, the Interferon-Induced Ubiquitin Cross Reactive Protein
Descriptor: OSMIUM 4+ ION, interferon, alpha-inducible protein (clone IFI-15K)
Authors:Narasimhan, J, Wang, M, Fu, Z, Klein, J.M, Haas, A.L, Kim, J.J.
Deposit date:2005-03-08
Release date:2005-05-24
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of the Interferon-induced Ubiquitin-like Protein ISG15.
J.Biol.Chem., 280, 2005
4WZP
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BU of 4wzp by Molmil
Ser65 phosphorylated ubiquitin, major conformation
Descriptor: SULFATE ION, ubiquitin
Authors:Wauer, T, Wagstaff, J, Freund, S.M.V, Komander, D.
Deposit date:2014-11-20
Release date:2015-01-14
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Ubiquitin Ser65 phosphorylation affects ubiquitin structure, chain assembly and hydrolysis.
Embo J., 34, 2015
4XKL
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BU of 4xkl by Molmil
Crystal structure of NDP52 ZF2 in complex with mono-ubiquitin
Descriptor: ACETATE ION, Calcium-binding and coiled-coil domain-containing protein 2, GLYCEROL, ...
Authors:Xie, X, Li, F, Wang, Y, Lin, Z, Chen, X, Liu, J, Pan, L.
Deposit date:2015-01-12
Release date:2015-11-11
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Molecular basis of ubiquitin recognition by the autophagy receptor CALCOCO2
Autophagy, 11, 2015
4XOK
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BU of 4xok by Molmil
Observing the overall rocking motion of a protein in a crystal.
Descriptor: Ubiquitin, ZINC ION
Authors:Coquelle, N, Ma, P, Schanda, P, Colletier, J.P.
Deposit date:2015-01-16
Release date:2015-10-14
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Observing the overall rocking motion of a protein in a crystal.
Nat Commun, 6, 2015
4Y1H
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BU of 4y1h by Molmil
Crystal structure of K33 linked tri-Ubiquitin
Descriptor: 1,2-ETHANEDIOL, Ubiquitin-40S ribosomal protein S27a
Authors:Kristariyanto, Y.A, Abdul Rehman, S.A, Choi, S.Y, Ritorto, S, Campbell, D.G, Morrice, N.A, Toth, R, Kulathu, Y.
Deposit date:2015-02-07
Release date:2015-03-18
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Assembly and structure of Lys33-linked polyubiquitin reveals distinct conformations.
Biochem.J., 467, 2015
4XKH
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BU of 4xkh by Molmil
CRYSTAL STRUCTURE OF THE AIRAPL TANDEM UIMS IN COMPLEX WITH A LYS48-LINKED TRI-UBIQUITIN
Descriptor: AN1-type zinc finger protein 2B, Polyubiquitin-C
Authors:Rahighi, S, Kawasaki, M, Stanhill, A, Wakatsuki, S.
Deposit date:2015-01-11
Release date:2016-02-17
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3 Å)
Cite:Selective Binding of AIRAPL Tandem UIMs to Lys48-Linked Tri-Ubiquitin Chains.
Structure, 24, 2016
7CAP
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BU of 7cap by Molmil
Cyclic Lys48-linked triubiquitin
Descriptor: Ubiquitin, ZINC ION
Authors:Hiranyakorn, M, Yanaka, S, Satoh, T, Wilasri, T, Jityuti, B, Yagi-Utsumi, T, Kato, K.
Deposit date:2020-06-09
Release date:2020-08-19
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.33 Å)
Cite:NMR Characterization of Conformational Interconversions of Lys48-Linked Ubiquitin Chains.
Int J Mol Sci, 21, 2020
6XQC
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BU of 6xqc by Molmil
UbKEKS
Descriptor: Polyubiquitin-B
Authors:Delattre, P, Letourneau, D, Lavigne, P, Roucou, X, Boisvert, F.M.
Deposit date:2020-07-09
Release date:2021-05-19
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution NMR structure of UbKEKS
To Be Published
7EAO
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BU of 7eao by Molmil
The structure of the A20-binding inhibitor of NF-kB 1 in complex with tri-ubiquitin
Descriptor: Polyubiquitin-C, TNFAIP3-interacting protein 1
Authors:Lo, Y.C, Lin, S.C.
Deposit date:2021-03-07
Release date:2021-07-21
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural and Biochemical Basis for Higher-Order Assembly between A20-Binding Inhibitor of NF-kappa B 1 (ABIN1) and M1-Linked Ubiquitins.
J.Mol.Biol., 433, 2021
7EB9
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BU of 7eb9 by Molmil
The structure of the A20-binding inhibitor of NF-kB 1 in complex with tetra-ubiquitin
Descriptor: TNFAIP3-interacting protein 1, tetra ubiquitin
Authors:Lo, Y.C, Lin, S.C.
Deposit date:2021-03-09
Release date:2021-07-21
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural and Biochemical Basis for Higher-Order Assembly between A20-Binding Inhibitor of NF-kappa B 1 (ABIN1) and M1-Linked Ubiquitins.
J.Mol.Biol., 433, 2021
7EAL
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BU of 7eal by Molmil
The structure of the A20-Binding Inhibitor of NF-kB 1 in complex with di-ubiquitin
Descriptor: GLYCEROL, TNFAIP3-interacting protein 1, ubiquitin
Authors:Lo, Y.C, Lin, S.C.
Deposit date:2021-03-07
Release date:2021-07-21
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural and Biochemical Basis for Higher-Order Assembly between A20-Binding Inhibitor of NF-kappa B 1 (ABIN1) and M1-Linked Ubiquitins.
J.Mol.Biol., 433, 2021
7E62
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BU of 7e62 by Molmil
Mouse TAB2 NZF in complex with Lys6-linked diubiquitin
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, TGF-beta-activated kinase 1 and MAP3K7-binding protein 2, Ubiquitin, ...
Authors:Sato, Y, Li, Y, Okatsu, K, Fukai, S.
Deposit date:2021-02-21
Release date:2021-08-18
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Structural basis for specific recognition of K6-linked polyubiquitin chains by the TAB2 NZF domain.
Biophys.J., 120, 2021
7BU0
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BU of 7bu0 by Molmil
Crystal structure of a OTU deubiquitinase in complex with Ub-PA
Descriptor: Polyubiquitin-B, Uncharacterized protein, prop-2-en-1-amine
Authors:Ouyang, S.Y, Zhen, X.K.
Deposit date:2020-04-03
Release date:2020-11-18
Last modified:2023-04-05
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Interplay between bacterial deubiquitinase and ubiquitin E3 ligase regulates ubiquitin dynamics on Legionella phagosomes.
Elife, 9, 2020

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数据于2024-06-19公开中

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