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7KEO	Crystal structure of K29-linked di-ubiquitin in complex with synthetic antigen binding fragment Descriptor: PHOSPHATE ION, Synthetic antigen binding fragment, heavy chain, ... Authors: Yu, Y, Zheng, Q, Erramilli, S, Pan, M, Kossiakoff, A, Liu, L, Zhao, M. Deposit date: 2020-10-11 Release date: 2021-07-28 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (2.9 Å) Cite: K29-linked ubiquitin signaling regulates proteotoxic stress response and cell cycle. Nat.Chem.Biol., 17, 2021
7BU0	Crystal structure of a OTU deubiquitinase in complex with Ub-PA Descriptor: Polyubiquitin-B, Uncharacterized protein, prop-2-en-1-amine Authors: Ouyang, S.Y, Zhen, X.K. Deposit date: 2020-04-03 Release date: 2020-11-18 Last modified: 2023-04-05 Method: X-RAY DIFFRACTION (2.43 Å) Cite: Interplay between bacterial deubiquitinase and ubiquitin E3 ligase regulates ubiquitin dynamics on Legionella phagosomes. Elife, 9, 2020
4EEW	Crystal structure of the Ubl domain of BAG6 Descriptor: Large proline-rich protein BAG6 Authors: Kozlov, G, LePage, K, Vinaik, R, Gehring, K. Deposit date: 2012-03-28 Release date: 2012-04-11 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (1.3 Å) Cite: Crystal structure of the Ubl domain of BAG6 To be Published
1SIF	Crystal structure of a multiple hydrophobic core mutant of ubiquitin Descriptor: ubiquitin Authors: Benitez-Cardoza, C.G, Stott, K, Hirshberg, M, Went, H.M, Woolfson, D.N, Jackson, S.E. Deposit date: 2004-02-29 Release date: 2004-07-27 Last modified: 2023-08-23 Method: X-RAY DIFFRACTION (2.18 Å) Cite: Exploring sequence/folding space: folding studies on multiple hydrophobic core mutants of ubiquitin Biochemistry, 43, 2004
7CAP	Cyclic Lys48-linked triubiquitin Descriptor: Ubiquitin, ZINC ION Authors: Hiranyakorn, M, Yanaka, S, Satoh, T, Wilasri, T, Jityuti, B, Yagi-Utsumi, T, Kato, K. Deposit date: 2020-06-09 Release date: 2020-08-19 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (1.33 Å) Cite: NMR Characterization of Conformational Interconversions of Lys48-Linked Ubiquitin Chains. Int J Mol Sci, 21, 2020
1L2N	Smt3 Solution Structure Descriptor: Ubiquitin-like protein SMT3 Authors: Sheng, W, Liao, X. Deposit date: 2002-02-22 Release date: 2002-03-06 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: Solution structure of a yeast ubiquitin-like protein Smt3: the role of structurally less defined sequences in protein-protein recognitions. Protein Sci., 11, 2002
1P1A	NMR structure of ubiquitin-like domain of hHR23B Descriptor: UV excision repair protein RAD23 homolog B Authors: Ryu, K.S, Lee, K.J, Bae, S.H, Kim, B.K, Kim, K.A, Choi, B.S. Deposit date: 2003-04-11 Release date: 2004-07-13 Last modified: 2024-05-29 Method: SOLUTION NMR Cite: Binding surface mapping of intra- and interdomain interactions among hHR23B, ubiquitin, and polyubiquitin binding site 2 of S5a J.Biol.Chem., 278, 2003
1UD7	SOLUTION STRUCTURE OF THE DESIGNED HYDROPHOBIC CORE MUTANT OF UBIQUITIN, 1D7 Descriptor: PROTEIN (UBIQUITIN CORE MUTANT 1D7) Authors: Johnson, E.C, Lazar, G.A, Desjarlais, J.R, Handel, T.M. Deposit date: 1999-04-07 Release date: 1999-05-06 Last modified: 2023-12-27 Method: SOLUTION NMR Cite: Solution structure and dynamics of a designed hydrophobic core variant of ubiquitin. Structure Fold.Des., 7, 1999
1OGW	Synthetic Ubiquitin with fluoro-Leu at 50 and 67 Descriptor: UBIQUITIN Authors: Alexeev, D, Ramage, R, Young, D.W, Sawyer, L. Deposit date: 2003-05-13 Release date: 2003-05-30 Last modified: 2023-12-13 Method: X-RAY DIFFRACTION (1.32 Å) Cite: Synthesis, Structural and Biological Studies of Ubiquitin Mutants Containing (2S, 4S)-5-Fluoroleucine Residues Strategically Placed in the Hydrophobic Core Chembiochem, 4, 2003
1M94	Solution Structure of the Yeast Ubiquitin-Like Modifier Protein Hub1 Descriptor: Protein YNR032c-a Authors: Ramelot, T.A, Cort, J.R, Yee, A.A, Semesi, A, Edwards, A.M, Arrowsmith, C.H, Kennedy, M.A, Northeast Structural Genomics Consortium (NESG) Deposit date: 2002-07-26 Release date: 2002-12-11 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: Solution Structure of the Yeast Ubiquitin-Like Modifier Protein Hub1 J.STRUCT.FUNCT.GENOM., 4, 2003
4GU2	Crystal structure of ubiquitin from Entamoeba histolytica to 1.35 Angstrom Descriptor: Ubiquitin Authors: Bosch, D.E, Siderovski, D.P. Deposit date: 2012-08-29 Release date: 2012-12-12 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (1.35 Å) Cite: Structural Determinants of Ubiquitin Conjugation in Entamoeba histolytica. J.Biol.Chem., 288, 2013
4GOC	Crystal structure of the Get5 ubiquitin-like domain Descriptor: Golgi to ER traffic protein 5 Authors: Chartron, J.W, VanderVelde, D.G, Clemons Jr, W.M. Deposit date: 2012-08-19 Release date: 2012-11-21 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Structures of the Sgt2/SGTA Dimerization Domain with the Get5/UBL4A UBL Domain Reveal an Interaction that Forms a Conserved Dynamic Interface. Cell Rep, 2, 2012
1MG8	NMR structure of ubiquitin-like domain in murine Parkin Descriptor: Parkin Authors: Tashiro, M, Okubo, S, Shimotakahara, S, Hatanaka, H, Yasuda, H, Kainosho, M, Yokoyama, S, Shindo, H, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2002-08-15 Release date: 2003-04-08 Last modified: 2024-05-29 Method: SOLUTION NMR Cite: NMR structure of ubiquitin-like domain in PARKIN: Gene product of familial Parkinson's disease. J.Biomol.NMR, 25, 2003
7EAL	The structure of the A20-Binding Inhibitor of NF-kB 1 in complex with di-ubiquitin Descriptor: GLYCEROL, TNFAIP3-interacting protein 1, ubiquitin Authors: Lo, Y.C, Lin, S.C. Deposit date: 2021-03-07 Release date: 2021-07-21 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Structural and Biochemical Basis for Higher-Order Assembly between A20-Binding Inhibitor of NF-kappa B 1 (ABIN1) and M1-Linked Ubiquitins. J.Mol.Biol., 433, 2021
7EAO	The structure of the A20-binding inhibitor of NF-kB 1 in complex with tri-ubiquitin Descriptor: Polyubiquitin-C, TNFAIP3-interacting protein 1 Authors: Lo, Y.C, Lin, S.C. Deposit date: 2021-03-07 Release date: 2021-07-21 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (2.9 Å) Cite: Structural and Biochemical Basis for Higher-Order Assembly between A20-Binding Inhibitor of NF-kappa B 1 (ABIN1) and M1-Linked Ubiquitins. J.Mol.Biol., 433, 2021
7EB9	The structure of the A20-binding inhibitor of NF-kB 1 in complex with tetra-ubiquitin Descriptor: TNFAIP3-interacting protein 1, tetra ubiquitin Authors: Lo, Y.C, Lin, S.C. Deposit date: 2021-03-09 Release date: 2021-07-21 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (3.2 Å) Cite: Structural and Biochemical Basis for Higher-Order Assembly between A20-Binding Inhibitor of NF-kappa B 1 (ABIN1) and M1-Linked Ubiquitins. J.Mol.Biol., 433, 2021
7E62	Mouse TAB2 NZF in complex with Lys6-linked diubiquitin Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, TGF-beta-activated kinase 1 and MAP3K7-binding protein 2, Ubiquitin, ... Authors: Sato, Y, Li, Y, Okatsu, K, Fukai, S. Deposit date: 2021-02-21 Release date: 2021-08-18 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (1.99 Å) Cite: Structural basis for specific recognition of K6-linked polyubiquitin chains by the TAB2 NZF domain. Biophys.J., 120, 2021
1TTN	Solution structure of the ubiquitin-like domain of human DC-UBP from dendritic cells Descriptor: dendritic cell-derived ubiquitin-like protein Authors: Hu, H.Y. Deposit date: 2004-06-23 Release date: 2005-07-05 Last modified: 2024-05-29 Method: SOLUTION NMR Cite: Solution structure of the ubiquitin-like domain of human DC-UbP from dendritic cells Protein Sci., 14, 2005
1TBE	STRUCTURE OF TETRAUBIQUITIN SHOWS HOW MULTIUBIQUITIN CHAINS CAN BE FORMED Descriptor: TETRAUBIQUITIN Authors: Cook, W.J, Jeffrey, L.C, Kasperek, E, Pickart, C.M. Deposit date: 1993-10-14 Release date: 1994-01-31 Last modified: 2019-08-14 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Structure of tetraubiquitin shows how multiubiquitin chains can be formed. J.Mol.Biol., 236, 1994
4GSW	Crystal structure of ubiquitin from Entamoeba histolytica to 2.15 Angstrom Descriptor: SULFATE ION, Ubiquitin Authors: Bosch, D.E, Siderovski, D.P. Deposit date: 2012-08-28 Release date: 2012-12-12 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2.15 Å) Cite: Structural Determinants of Ubiquitin Conjugation in Entamoeba histolytica. J.Biol.Chem., 288, 2013
1UBI	SYNTHETIC STRUCTURAL AND BIOLOGICAL STUDIES OF THE UBIQUITIN SYSTEM. PART 1 Descriptor: UBIQUITIN Authors: Alexeev, D, Bury, S.M, Turner, M.A, Ogunjobi, O.M, Muir, T.W, Ramage, R, Sawyer, L. Deposit date: 1994-02-03 Release date: 1994-05-31 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Synthetic, structural and biological studies of the ubiquitin system: the total chemical synthesis of ubiquitin. Biochem.J., 299, 1994
1NDD	STRUCTURE OF NEDD8 Descriptor: CHLORIDE ION, PROTEIN (UBIQUITIN-LIKE PROTEIN NEDD8), SULFATE ION Authors: Whitby, F.G, Xia, G, Pickart, C.M, Hill, C.P. Deposit date: 1998-08-21 Release date: 1999-02-23 Last modified: 2023-08-16 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Crystal structure of the human ubiquitin-like protein NEDD8 and interactions with ubiquitin pathway enzymes. J.Biol.Chem., 273, 1998
4HK2	U7Ub25.2540 Descriptor: SULFATE ION, Ubiquitin Authors: Murray, J.M, Rouge, L. Deposit date: 2012-10-14 Release date: 2012-11-21 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.4 Å) Cite: Potent and selective inhibitors of USP7/HAUSP activity by protein conformational stabilization to be published
1UBQ	STRUCTURE OF UBIQUITIN REFINED AT 1.8 ANGSTROMS RESOLUTION Descriptor: UBIQUITIN Authors: Vijay-Kumar, S, Bugg, C.E, Cook, W.J. Deposit date: 1987-01-02 Release date: 1987-04-16 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Structure of ubiquitin refined at 1.8 A resolution. J.Mol.Biol., 194, 1987
1UH6	Solution Structure of the murine ubiquitin-like 5 protein from RIKEN cDNA 0610031K06 Descriptor: ubiquitin-like 5 Authors: Hayashi, F, Shirouzu, M, Terada, T, Kigawa, T, Inoue, M, Yabuki, T, Aoki, M, Seki, E, Matsuda, T, Hirota, H, Yoshida, M, Tanaka, A, Osanai, T, Arakawa, T, Carninci, P, Kawai, J, Hayashizaki, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2003-06-25 Release date: 2003-12-25 Last modified: 2023-12-27 Method: SOLUTION NMR Cite: Solution Structure of the murine ubiquitin-like 5 protein from RIKEN cDNA 0610031K06 To be Published

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