PDB: 66478 resultsInfo pagesStatus searchChemie searchBIRD

---

6QVM	Undecaheme cytochrome from S-layer of Carboxydothermus ferrireducens Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose, 2-acetamido-2-deoxy-beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose, ... Authors: Osipov, E.M, Dergousova, N.I, Boyko, K.M, Tikhonova, T.V, Gavrilov, S.F, Popov, V.O. Deposit date: 2019-03-04 Release date: 2020-03-25 Last modified: 2023-02-08 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Extracellular Fe(III) reductase structure reveals a modular organization enabling S-layer insertion and electron transfer to insoluble substrates Structure, 2023
7C6H	Crystal structure of beta-glycosides-binding protein (W177X) of ABC transporter in an open-liganded state bound to laminaribiose Descriptor: 1,2-ETHANEDIOL, ACETATE ION, CHLORIDE ION, ... Authors: Kanaujia, S.P, Chandravanshi, M, Samanta, R. Deposit date: 2020-05-21 Release date: 2020-10-21 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (1.85 Å) Cite: Conformational Trapping of a beta-Glucosides-Binding Protein Unveils the Selective Two-Step Ligand-Binding Mechanism of ABC Importers. J.Mol.Biol., 432, 2020
7C6Z	Crystal structure of beta-glycosides-binding protein (W67A) of ABC transporter in an open state Descriptor: 1,2-ETHANEDIOL, CARBON DIOXIDE, CHLORIDE ION, ... Authors: Kanaujia, S.P, Chandravanshi, M, Samanta, R. Deposit date: 2020-05-22 Release date: 2020-09-16 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (1.63 Å) Cite: Conformational Trapping of a beta-Glucosides-Binding Protein Unveils the Selective Two-Step Ligand-Binding Mechanism of ABC Importers. J.Mol.Biol., 432, 2020
7C6N	Crystal structure of beta-glycosides-binding protein (W177X) of ABC transporter in a closed state bound to cellotetraose (Form II) Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, SULFITE ION, ... Authors: Kanaujia, S.P, Chandravanshi, M, Samanta, R. Deposit date: 2020-05-21 Release date: 2020-09-16 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (2.05 Å) Cite: Conformational Trapping of a beta-Glucosides-Binding Protein Unveils the Selective Two-Step Ligand-Binding Mechanism of ABC Importers. J.Mol.Biol., 432, 2020
6QPJ	Human CLOCK PAS-A domain Descriptor: Circadian locomoter output cycles protein kaput Authors: Kwon, H, Freeman, S.L, Moody, P.C.E, Raven, E.L, Basran, J. Deposit date: 2019-02-14 Release date: 2019-09-25 Last modified: 2024-05-15 Method: X-RAY DIFFRACTION (2.315 Å) Cite: Heme binding to human CLOCK affects interactions with the E-box. Proc.Natl.Acad.Sci.USA, 116, 2019
6QQL	Crystal structure of Porphyromonas gingivalis glutaminyl cyclase Descriptor: Glutamine cyclotransferase, ZINC ION Authors: Linnert, M, Piechotta, A, Parthier, C, Taudte, N, Kolenko, P, Rahfeld, J, Potempa, J, Stubbs, M.T. Deposit date: 2019-02-18 Release date: 2019-03-06 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (2.814 Å) Cite: Mammalian-like type II glutaminyl cyclases in Porphyromonas gingivalis and other oral pathogenic bacteria as targets for treatment of periodontitis. J.Biol.Chem., 296, 2021
7C6R	Crystal structure of beta-glycosides-binding protein (W177X) of ABC transporter in a closed state bound to cellopentaose Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, SULFATE ION, ... Authors: Kanaujia, S.P, Chandravanshi, M, Samanta, R. Deposit date: 2020-05-22 Release date: 2020-09-16 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (1.96 Å) Cite: Conformational Trapping of a beta-Glucosides-Binding Protein Unveils the Selective Two-Step Ligand-Binding Mechanism of ABC Importers. J.Mol.Biol., 432, 2020
7C68	Crystal structure of beta-glycosides-binding protein of ABC transporter in a closed state bound to cellotetraose Descriptor: 1,2-ETHANEDIOL, CARBON DIOXIDE, CHLORIDE ION, ... Authors: Kanaujia, S.P, Chandravanshi, M, Samanta, R. Deposit date: 2020-05-21 Release date: 2020-09-16 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (2.05 Å) Cite: Conformational Trapping of a beta-Glucosides-Binding Protein Unveils the Selective Two-Step Ligand-Binding Mechanism of ABC Importers. J.Mol.Biol., 432, 2020
7C69	Crystal structure of beta-glycosides-binding protein of ABC transporter in a closed state bound to sophorose Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Sugar ABC transporter, ... Authors: Kanaujia, S.P, Chandravanshi, M, Samanta, R. Deposit date: 2020-05-21 Release date: 2020-09-16 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (2.35 Å) Cite: Conformational Trapping of a beta-Glucosides-Binding Protein Unveils the Selective Two-Step Ligand-Binding Mechanism of ABC Importers. J.Mol.Biol., 432, 2020
7C6V	Crystal structure of beta-glycosides-binding protein (W177X) of ABC transporter in a closed state bound to laminaritriose (Form II) Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ... Authors: Kanaujia, S.P, Chandravanshi, M, Samanta, R. Deposit date: 2020-05-22 Release date: 2020-09-16 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Conformational Trapping of a beta-Glucosides-Binding Protein Unveils the Selective Two-Step Ligand-Binding Mechanism of ABC Importers. J.Mol.Biol., 432, 2020
2BZS	Binding of anti-cancer prodrug CB1954 to the activating enzyme NQO2 revealed by the crystal structure of their complex. Descriptor: 5-(AZIRIDIN-1-YL)-2,4-DINITROBENZAMIDE, FLAVIN-ADENINE DINUCLEOTIDE, NRH DEHYDROGENASE [QUINONE] 2, ... Authors: Abu Khader, M.M, Heap, J.T, De Matteis, C, Kellam, B, Doughty, S.W, Minton, N, Paoli, M. Deposit date: 2005-08-22 Release date: 2005-09-23 Last modified: 2023-12-13 Method: X-RAY DIFFRACTION (2 Å) Cite: Binding of the Anticancer Prodrug Cb1954 to the Activating Enzyme Nqo2 Revealed by the Crystal Structure of Their Complex. J.Med.Chem., 48, 2005
2B90	Crystal structure of the interleukin-4 variant T13DR85A Descriptor: Interleukin-4, SULFATE ION Authors: Kraich, M, Klein, M, Patino, E, Harrer, H, Sebald, W, Mueller, T.D. Deposit date: 2005-10-10 Release date: 2006-05-30 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (2.1 Å) Cite: A modular interface of IL-4 allows for scalable affinity without affecting specificity for the IL-4 receptor Bmc Biol., 4, 2006
2B91	Crystal structure of the interleukin-4 variant F82DR85A Descriptor: Interleukin-4, SULFATE ION Authors: Kraich, M, Klein, M, Patino, E, Harrer, H, Sebald, W, Mueller, T.D. Deposit date: 2005-10-10 Release date: 2006-05-30 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (2 Å) Cite: A modular interface of IL-4 allows for scalable affinity without affecting specificity for the IL-4 receptor Bmc Biol., 4, 2006
2B8Z	Crystal structure of the interleukin-4 variant R85A Descriptor: Interleukin-4, SULFATE ION Authors: Kraich, M, Klein, M, Patino, E, Harrer, H, Sebald, W, Mueller, T.D. Deposit date: 2005-10-10 Release date: 2006-05-30 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (2.5 Å) Cite: A modular interface of IL-4 allows for scalable affinity without affecting specificity for the IL-4 receptor Bmc Biol., 4, 2006
2FBN	Plasmodium falciparum putative FK506-binding protein PFL2275c, C-terminal TPR-containing domain Descriptor: 70 kDa peptidylprolyl isomerase, putative Authors: Dong, A, Lew, J, Koeieradzki, I, Sundararajan, E, Melone, M, Wasney, G, Zhao, Y, Edwards, A.M, Arrowsmith, C.H, Weigelt, J, Sundstrom, M, Bochkarev, A, Hui, R, Hills, T, Structural Genomics Consortium (SGC) Deposit date: 2005-12-09 Release date: 2006-01-24 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (1.63 Å) Cite: Crystallographic structure of the tetratricopeptide repeat domain of Plasmodium falciparum FKBP35 and its molecular interaction with Hsp90 C-terminal pentapeptide. Protein Sci., 18, 2009
2GC3	The crystal structure of phosphoglucose isomerase from Pyrococcus furiosus in complex with mannose 6-phosphate and zinc Descriptor: 6-O-phosphono-alpha-D-mannopyranose, Glucose-6-phosphate isomerase, ZINC ION Authors: Berrisford, J.M, Rice, D.W, Baker, P.J. Deposit date: 2006-03-13 Release date: 2006-04-11 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Evidence Supporting a cis-enediol-based Mechanism for Pyrococcus furiosus Phosphoglucose Isomerase J.Mol.Biol., 358, 2006
9F8X	Low-dose structure of Marinobacter nauticus nitrous oxide reductase Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, CHLORIDE ION, ... Authors: Einsle, O, Pomowski, A. Deposit date: 2024-05-07 Release date: 2024-06-19 Method: X-RAY DIFFRACTION (1.498 Å) Cite: Revisiting the metal sites of nitrous oxide reductase in a low-dose structure from Marinobacter nauticus. J.Biol.Inorg.Chem., 29, 2024
8YTE	Crystal Structure of TrkA D5 domain in complex with macrocyclic peptide Descriptor: 1,2-ETHANEDIOL, AMINOMETHYLAMIDE, High affinity nerve growth factor receptor, ... Authors: Yamada, T, Mihara, K, Ueda, T, Yamauchi, D, Shimizu, M, Ando, A, Mayumi, K, Nakata, Z, Mikamiyama, H. Deposit date: 2024-03-25 Release date: 2024-07-10 Last modified: 2024-07-24 Method: X-RAY DIFFRACTION (2.26 Å) Cite: Discovery and Hit to Lead Optimization of Macrocyclic Peptides as Novel Tropomyosin Receptor Kinase A Antagonists. J.Med.Chem., 67, 2024
5W4I	X-ray crystallographic structure of a beta-hairpin peptide mimic derived from Abeta 16-36. Rigaku data set. (ORN)KLV(MEA)FAE(ORN)AIIGLMV. Descriptor: A-beta 17_36: ORN-LYS-LEU-VAL-MEA-PHE-ALA-GLU-ORN-ALA-ILE-ILE-GLY-LEU-MET-VAL, CHLORIDE ION, IODIDE ION Authors: Kreutzer, A.G, McKnelly, K.J, Nowick, J.S. Deposit date: 2017-06-11 Release date: 2017-11-22 Last modified: 2020-01-01 Method: X-RAY DIFFRACTION (2.026 Å) Cite: A Hexamer of a Peptide Derived from A beta 16-36. Biochemistry, 56, 2017
5W4J	X-ray crystallographic structure of a beta-hairpin peptide mimic. (ORN)KLV(MEA)FAE(ORN)AIIGLMV. Descriptor: A-beta 17_36 peptide: ORN-LYS-VAL-PHE-MEA-ALA-ALA-ASP-ORN-ALA-ILE-ILE-GLY-LEU-MET-VAL Authors: Kreutzer, A.G, Nowick, J.S. Deposit date: 2017-06-11 Release date: 2017-11-22 Last modified: 2020-01-01 Method: X-RAY DIFFRACTION (2.08 Å) Cite: A Hexamer of a Peptide Derived from A beta 16-36. Biochemistry, 56, 2017
8YTD	Crystal Structure of TrkA D5 domain in complex with two different macrocyclic peptides Descriptor: 1,2-ETHANEDIOL, High affinity nerve growth factor receptor, Macrocyclic Peptide Authors: Yamada, T, Mihara, K, Ueda, T, Yamauchi, D, Shimizu, M, Ando, A, Mayumi, K, Nakata, Z, Mikamiyama, H. Deposit date: 2024-03-25 Release date: 2024-07-10 Last modified: 2024-07-24 Method: X-RAY DIFFRACTION (2.34 Å) Cite: Discovery and Hit to Lead Optimization of Macrocyclic Peptides as Novel Tropomyosin Receptor Kinase A Antagonists. J.Med.Chem., 67, 2024
5W7Y	Crystal Structure of FHA domain of human APLF in complex with XRCC1 monophosphorylated mutated peptide Descriptor: Aprataxin and PNK-like factor, DNA repair protein XRCC1 Authors: Pedersen, L.C, Kim, K, London, R.E. Deposit date: 2017-06-21 Release date: 2018-05-02 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Characterization of the APLF FHA-XRCC1 phosphopeptide interaction and its structural and functional implications. Nucleic Acids Res., 45, 2017
5WLE	Crystal structure of the PPS PHD finger in complex with H3K4me3 Descriptor: H3K4me3 Peptide, Protein partner of snf, isoform A, ... Authors: Klein, B.J, Kutateladze, T.G. Deposit date: 2017-07-26 Release date: 2017-10-04 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (1.952 Å) Cite: A Unique pH-Dependent Recognition of Methylated Histone H3K4 by PPS and DIDO. Structure, 25, 2017
5WN0	APE1 exonuclease substrate complex with a C/G match Descriptor: DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*C)-3'), DNA (5'-D(*GP*GP*AP*TP*CP*CP*GP*TP*CP*GP*AP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), DNA (5'-D(P*TP*CP*GP*AP*CP*GP*GP*AP*TP*CP*C)-3'), ... Authors: Freudenthal, B.D, Whitaker, A.M. Deposit date: 2017-07-31 Release date: 2018-02-28 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (2.6 Å) Cite: Molecular snapshots of APE1 proofreading mismatches and removing DNA damage. Nat Commun, 9, 2018
8H6R	LW Domain of Arabidopsis thaliana TFIIS Descriptor: Transcription elongation factor TFIIS Authors: Wang, Y. Deposit date: 2022-10-18 Release date: 2022-11-23 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (2.6 Å) Cite: LW Domain of Arabidopsis thaliana TFIIS To Be Published

<248249250251252253254255256257258259260261262263>