Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6E0X
DownloadVisualize
BU of 6e0x by Molmil
A131E mutant of cyt P460 of Nitrosomonas sp. AL212
Descriptor: Cytochrome P460, HEME C
Authors:Smith, M, Lancaster, K.
Deposit date:2018-07-07
Release date:2019-02-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.974 Å)
Cite:Controlling a burn: outer-sphere gating of hydroxylamine oxidation by a distal base in cytochrome P460.
Chem Sci, 10, 2019
7NDT
DownloadVisualize
BU of 7ndt by Molmil
UL40:01 TCR in complex with HLA-E with a non-natural amino acid
Descriptor: Beta-2-microglobulin, HLA class I histocompatibility antigen, alpha chain E, ...
Authors:Pengelly, R.J, Robinson, R.A.
Deposit date:2021-02-02
Release date:2022-01-26
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.999 Å)
Cite:Structure-guided stabilization of pathogen-derived peptide-HLA-E complexes using non-natural amino acids conserves native TCR recognition.
Eur.J.Immunol., 52, 2022
7NDU
DownloadVisualize
BU of 7ndu by Molmil
Gag:02 TCR in complex with HLA-E featuring a non-natural amino acid
Descriptor: Beta-2-microglobulin, Gag6V(276-284 H4C), HLA class I histocompatibility antigen, ...
Authors:Pengelly, R.J, Robinson, R.A.
Deposit date:2021-02-02
Release date:2022-01-26
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure-guided stabilization of pathogen-derived peptide-HLA-E complexes using non-natural amino acids conserves native TCR recognition.
Eur.J.Immunol., 52, 2022
7NDQ
DownloadVisualize
BU of 7ndq by Molmil
Gag:02 TCR in complex with HLA-E.
Descriptor: Beta-2-microglobulin, Gag6V, HLA class I histocompatibility antigen, ...
Authors:Pengelly, R.J, Robinson, R.A.
Deposit date:2021-02-02
Release date:2022-01-26
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.551 Å)
Cite:Structure-guided stabilization of pathogen-derived peptide-HLA-E complexes using non-natural amino acids conserves native TCR recognition.
Eur.J.Immunol., 52, 2022
6FY4
DownloadVisualize
BU of 6fy4 by Molmil
Structure of human NAD(P) H:quinone oxidoreductase in complex with N-(2-bromophenyl)pyrrolidine-1-sulfonamide
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, N-(2-bromophenyl)pyrrolidine-1-sulfonamide, NAD(P)H dehydrogenase [quinone] 1
Authors:Gruber, K, Hromic, A.
Deposit date:2018-03-10
Release date:2019-03-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.76 Å)
Cite:A small molecule chaperone rescues the stability and activity of a cancer-associated variant of NAD(P)H:quinone oxidoreductase 1 in vitro.
Febs Lett., 594, 2020
6G2Z
DownloadVisualize
BU of 6g2z by Molmil
Crystal structure of the p97 D2 domain in a helical split-washer conformation
Descriptor: (3-phenyl-1,2-oxazol-5-yl)methylazanium, (4S)-2-METHYL-2,4-PENTANEDIOL, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Stach, L, Morgan, R.M.L, Freemont, P.S.
Deposit date:2018-03-23
Release date:2019-04-10
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.923 Å)
Cite:Crystal structure of the catalytic D2 domain of the AAA+ ATPase p97 reveals a putative helical split-washer-type mechanism for substrate unfolding.
Febs Lett., 594, 2020
6GHX
DownloadVisualize
BU of 6ghx by Molmil
Alzheimer's Amyloid-Beta Peptide Fragment 31-35 in Complex with Cd-substituted Thermolysin
Descriptor: CADMIUM ION, CALCIUM ION, DIMETHYL SULFOXIDE, ...
Authors:Leite, J.P, Gales, L.
Deposit date:2018-05-09
Release date:2019-02-06
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.156 Å)
Cite:Alzheimer's A beta1-40peptide degradation by thermolysin: evidence of inhibition by a C-terminal A beta product.
FEBS Lett., 593, 2019
7MZO
DownloadVisualize
BU of 7mzo by Molmil
Crystal structure of the UcaD lectin-binding domain
Descriptor: CHLORIDE ION, Fimbrial adhesin UcaD
Authors:Ve, T, Lo, A.W, Schembri, M.A, Kobe, B.
Deposit date:2021-05-24
Release date:2022-07-06
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Ucl fimbriae regulation and glycan receptor specificity contribute to gut colonisation by extra-intestinal pathogenic Escherichia coli.
Plos Pathog., 18, 2022
6GXT
DownloadVisualize
BU of 6gxt by Molmil
The hit-and-return system enables efficient time-resolved serial synchrotron crystallography: FAcD2052MS after reaction initiation
Descriptor: Fluoroacetate dehalogenase, fluoroacetic acid
Authors:Schulz, E.C, Mehrabi, P, Mueller-Werkmeister, H, Tellkamp, F, Stuart, W, Persch, E, De Gasparo, R, Diederich, F, Pai, E.F, Miller, R.J.D.
Deposit date:2018-06-27
Release date:2018-10-17
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:The hit-and-return system enables efficient time-resolved serial synchrotron crystallography.
Nat. Methods, 15, 2018
7MZQ
DownloadVisualize
BU of 7mzq by Molmil
Crystal structure of the UcaD lectin-binding domain in complex with fucose
Descriptor: CHLORIDE ION, Fimbrial adhesin UcaD, beta-L-fucopyranose
Authors:Ve, T, Lo, A.W, Schembri, M.A, Kobe, B.
Deposit date:2021-05-24
Release date:2022-07-06
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Ucl fimbriae regulation and glycan receptor specificity contribute to gut colonisation by extra-intestinal pathogenic Escherichia coli.
Plos Pathog., 18, 2022
7MZS
DownloadVisualize
BU of 7mzs by Molmil
Crystal structure of the UcaD lectin-binding domain in complex with galactose
Descriptor: CHLORIDE ION, Fimbrial adhesin UcaD, alpha-D-galactopyranose
Authors:Ve, T, Lo, A.W, Schembri, M.A, Kobe, B.
Deposit date:2021-05-24
Release date:2022-07-06
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Ucl fimbriae regulation and glycan receptor specificity contribute to gut colonisation by extra-intestinal pathogenic Escherichia coli.
Plos Pathog., 18, 2022
7MZP
DownloadVisualize
BU of 7mzp by Molmil
Crystal structure of the UclD lectin-binding domain
Descriptor: F17-like fimbril adhesin subunit UclD, IODIDE ION
Authors:Ve, T, Lo, A.W, Schembri, M.A, Kobe, B.
Deposit date:2021-05-24
Release date:2022-07-06
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Ucl fimbriae regulation and glycan receptor specificity contribute to gut colonisation by extra-intestinal pathogenic Escherichia coli.
Plos Pathog., 18, 2022
7MZR
DownloadVisualize
BU of 7mzr by Molmil
Crystal structure of the UcaD lectin-binding domain in complex with glucose
Descriptor: CHLORIDE ION, Fimbrial adhesin UcaD, beta-D-glucopyranose
Authors:Ve, T, Lo, A.W, Schembri, M.A, Kobe, B.
Deposit date:2021-05-24
Release date:2022-07-06
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Ucl fimbriae regulation and glycan receptor specificity contribute to gut colonisation by extra-intestinal pathogenic Escherichia coli.
Plos Pathog., 18, 2022
7NOZ
DownloadVisualize
BU of 7noz by Molmil
Structure of the nanobody stablized properdin bound alternative pathway proconvertase C3b:FB:FP
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Complement C3 alpha chain, Complement C3 beta chain, ...
Authors:Lorenzen, J, Pedersen, D.V, Andersen, G.R.
Deposit date:2021-02-26
Release date:2022-07-27
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.9 Å)
Cite:Structure determination of an unstable macromolecular complex enabled by nanobody-peptide bridging.
Protein Sci., 31, 2022
8W20
DownloadVisualize
BU of 8w20 by Molmil
Umb1 umbrella toxin particle
Descriptor: Intein C-terminal splicing domain-containing protein, Secreted esterase, Secreted protein
Authors:Park, Y.J, Zhao, Q, Seattle Structural Genomics Center for Infectious Disease (SSGCID), DiMaio, F, Mougous, J.D, Veesler, D.
Deposit date:2024-02-19
Release date:2024-04-17
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Streptomyces umbrella toxin particles block hyphal growth of competing species.
Nature, 629, 2024
9B9Q
DownloadVisualize
BU of 9b9q by Molmil
Cargo-loaded Myxococcus xanthus EncA encapsulin engineered pore mutant with T=3 icosahedral symmetry
Descriptor: Encapsulin nanocompartment cargo protein EncC, Type 1 encapsulin shell protein EncA
Authors:Andreas, M.P, Kwon, S, Giessen, T.W.
Deposit date:2024-04-03
Release date:2024-09-18
Last modified:2024-09-25
Method:ELECTRON MICROSCOPY (3.14 Å)
Cite:Pore Engineering as a General Strategy to Improve Protein-Based Enzyme Nanoreactor Performance.
Acs Nano, 18, 2024
8OTN
DownloadVisualize
BU of 8otn by Molmil
structure of InhA from mycobacterium tuberculosis in complex with inhibitor 7-((1-(3-Hydroxy-4-phenoxybenzyl)-1H-1,2,3-triazol-4-yl)methoxy)-4-methyl-2H-chromen-2-one
Descriptor: 4-methyl-7-[[1-[(3-oxidanyl-4-phenoxy-phenyl)methyl]-1,2,3-triazol-4-yl]methoxy]chromen-2-one, Enoyl-[acyl-carrier-protein] reductase [NADH], NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Chebaiki, M, Maveyraud, L, Tamhaev, R, Lherbet, C, Mourey, L.
Deposit date:2023-04-21
Release date:2023-08-16
Method:X-RAY DIFFRACTION (1.962 Å)
Cite:Discovery of new diaryl ether inhibitors against Mycobacterium tuberculosis targeting the minor portal of InhA.
Eur.J.Med.Chem., 259, 2023
8YXK
DownloadVisualize
BU of 8yxk by Molmil
X-ray structure of Clostridioides difficile endolysin Ecd09610 glucosaminidase domain.
Descriptor: Phage cell wall hydrolase
Authors:Kamitori, S, Tamai, E.
Deposit date:2024-04-02
Release date:2024-05-15
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:X-ray structure and mutagenesis analyses of Clostridioides difficile endolysin Ecd09610 glucosaminidase domain.
Biochem.Biophys.Res.Commun., 715, 2024
9EV5
DownloadVisualize
BU of 9ev5 by Molmil
Corynebacterium glutamicum CS176 pyruvate:quinone oxidoreductase (PQO) in complex with FAD and thiamine diphosphate-magnesium ion
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, MAGNESIUM ION, THIAMINE DIPHOSPHATE, ...
Authors:Da Silva Lameira, C, Muenssinger, S, Yang, L, Eikmanns, B.J, Bellinzoni, M.
Deposit date:2024-03-28
Release date:2024-08-07
Method:X-RAY DIFFRACTION (1.863 Å)
Cite:Corynebacterium glutamicum pyruvate:quinone oxidoreductase: an enigmatic metabolic enzyme with unusual structural features.
Febs J., 2024
9EV3
DownloadVisualize
BU of 9ev3 by Molmil
Corynebacterium glutamicum pyruvate:quinone oxidoreductase (PQO) purified from bacteria grown in acetate minimal medium
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, MAGNESIUM ION, THIAMINE DIPHOSPHATE, ...
Authors:Da Silva Lameira, C, Muenssinger, S, Yang, L, Eikmanns, B.J, Bellinzoni, M.
Deposit date:2024-03-28
Release date:2024-08-07
Method:X-RAY DIFFRACTION (1.219 Å)
Cite:Corynebacterium glutamicum pyruvate:quinone oxidoreductase: an enigmatic metabolic enzyme with unusual structural features.
Febs J., 2024
9AUR
DownloadVisualize
BU of 9aur by Molmil
Crystal structure of loop-closed A21 2'-OMe dumbbell RNA bridged by glycine
Descriptor: Fab BL3-6 heavy chain, Fab BL3-6 light chain, GLYCINE, ...
Authors:Radakovic, A, Lewicka, A, Todisco, M, Aitken, H.R.M, Weiss, Z, Kim, S, Bannan, A, Piccirilli, J.A, Szostak, J.W.
Deposit date:2024-02-29
Release date:2024-09-04
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:A potential role for RNA aminoacylation prior to its role in peptide synthesis.
Proc.Natl.Acad.Sci.USA, 121, 2024
8YXN
DownloadVisualize
BU of 8yxn by Molmil
X-ray structure of Clostridium perfringens autolysin catalytic domain in the P1 form
Descriptor: Cell surface protein
Authors:Kamitori, S, Tamai, E.
Deposit date:2024-04-02
Release date:2024-05-15
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:X-ray structure and mutagenesis analyses of Clostridioides difficile endolysin Ecd09610 glucosaminidase domain.
Biochem.Biophys.Res.Commun., 715, 2024
8W0S
DownloadVisualize
BU of 8w0s by Molmil
Human EBP complexed with compound 3a
Descriptor: 1-methyl-8-[(oxan-4-yl)methyl]-3-[4-(trifluoromethyl)phenyl]-1,3,8-triazaspiro[4.5]decane-2,4-dione, 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase
Authors:Sun, D, Masureel, M.
Deposit date:2024-02-14
Release date:2024-06-19
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Discovery and Optimization of Selective Brain-Penetrant EBP Inhibitors that Enhance Oligodendrocyte Formation.
J.Med.Chem., 67, 2024
9AUS
DownloadVisualize
BU of 9aus by Molmil
Crystal structure of loop-closed dumbbell RNA bridged by glycine
Descriptor: Fab BL3-6 heavy chain, Fab BL3-6 light chain, GLYCINE, ...
Authors:Radakovic, A, Lewicka, A, Todisco, M, Aitken, H.R.M, Weiss, Z, Kim, S, Bannan, A, Piccirilli, J.A, Szostak, J.W.
Deposit date:2024-02-29
Release date:2024-09-04
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:A potential role for RNA aminoacylation prior to its role in peptide synthesis.
Proc.Natl.Acad.Sci.USA, 121, 2024
3M0D
DownloadVisualize
BU of 3m0d by Molmil
Crystal structure of the TRAF1:TRAF2:cIAP2 complex
Descriptor: Baculoviral IAP repeat-containing protein 3, TNF receptor-associated factor 1, TNF receptor-associated factor 2, ...
Authors:Kabaleeswaran, V, Wu, H.
Deposit date:2010-03-02
Release date:2010-04-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structures of the TRAF2: cIAP2 and the TRAF1: TRAF2: cIAP2 complexes: affinity, specificity, and regulation.
Mol.Cell, 38, 2010

226262

数据于2024-10-16公开中

PDB statisticsPDBj update infoContact PDBjnumon