PDB: 465 resultsInfo pagesStatus searchChemie searchBIRD

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8G3F	BceAB-S nucleotide free BceS state 1 Descriptor: Bacitracin export ATP-binding protein BceA, Bacitracin export permease protein BceB, OLEIC ACID, ... Authors: George, N.L, Orlando, B.J. Deposit date: 2023-02-07 Release date: 2023-06-21 Last modified: 2024-06-19 Method: ELECTRON MICROSCOPY (3.7 Å) Cite: Architecture of a complete Bce-type antimicrobial peptide resistance module. Nat Commun, 14, 2023
8G3B	BceAB-S nucleotide free TM state 2 Descriptor: Bacitracin export ATP-binding protein BceA, Bacitracin export permease protein BceB, OLEIC ACID, ... Authors: George, N.L, Orlando, B.J. Deposit date: 2023-02-07 Release date: 2023-06-21 Last modified: 2024-06-19 Method: ELECTRON MICROSCOPY (3.5 Å) Cite: Architecture of a complete Bce-type antimicrobial peptide resistance module. Nat Commun, 14, 2023
8G3L	BceAB-S nucleotide free BceS state 2 Descriptor: Bacitracin export ATP-binding protein BceA, Bacitracin export permease protein BceB, OLEIC ACID, ... Authors: George, N.L, Orlando, B.J. Deposit date: 2023-02-08 Release date: 2023-06-21 Last modified: 2024-06-19 Method: ELECTRON MICROSCOPY (3.5 Å) Cite: Architecture of a complete Bce-type antimicrobial peptide resistance module. Nat Commun, 14, 2023
8G4C	BceABS ATPgS high res TM Descriptor: Bacitracin export ATP-binding protein BceA, Bacitracin export permease protein BceB, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ... Authors: George, N.L, Orlando, B.J. Deposit date: 2023-02-09 Release date: 2023-06-21 Last modified: 2024-06-19 Method: ELECTRON MICROSCOPY (3.1 Å) Cite: Architecture of a complete Bce-type antimicrobial peptide resistance module. Nat Commun, 14, 2023
8G3A	BceAB-S nucleotide free TM state 1 Descriptor: Bacitracin export ATP-binding protein BceA, Bacitracin export permease protein BceB, OLEIC ACID, ... Authors: George, N.L, Orlando, B.J. Deposit date: 2023-02-07 Release date: 2023-06-21 Last modified: 2024-06-19 Method: ELECTRON MICROSCOPY (3.4 Å) Cite: Architecture of a complete Bce-type antimicrobial peptide resistance module. Nat Commun, 14, 2023
8G4D	BceABS ATPgS tilted BceS Descriptor: Bacitracin export ATP-binding protein BceA, Bacitracin export permease protein BceB, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ... Authors: George, N.L, Orlando, B.J. Deposit date: 2023-02-09 Release date: 2023-06-21 Last modified: 2024-06-19 Method: ELECTRON MICROSCOPY (3.6 Å) Cite: Architecture of a complete Bce-type antimicrobial peptide resistance module. Nat Commun, 14, 2023
8U65	Cryo-EM structure of PsBphP in Pfr state, splayed PSM only Descriptor: 3-[2-[(Z)-[3-(2-carboxyethyl)-5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-pyrrol-1-ium -2-ylidene]methyl]-5-[(Z)-[(3E)-3-ethylidene-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-4-methyl-1H-pyrrol-3- yl]propanoic acid, histidine kinase Authors: Basore, K, Burgie, E.S, Vierstra, D. Deposit date: 2023-09-13 Release date: 2024-08-21 Last modified: 2024-11-06 Method: ELECTRON MICROSCOPY (3.01 Å) Cite: Signaling by a bacterial phytochrome histidine kinase involves a conformational cascade reorganizing the dimeric photoreceptor. Nat Commun, 15, 2024
8U63	Cryo-EM structure of PsBphP in Pfr state, Dimer of Dimers PSM only Descriptor: 3-[2-[(Z)-[3-(2-carboxyethyl)-5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-pyrrol-1-ium -2-ylidene]methyl]-5-[(Z)-[(3E)-3-ethylidene-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-4-methyl-1H-pyrrol-3- yl]propanoic acid, histidine kinase Authors: Basore, K, Burgie, E.S, Vierstra, D. Deposit date: 2023-09-13 Release date: 2024-08-21 Last modified: 2024-10-30 Method: ELECTRON MICROSCOPY (3.01 Å) Cite: Signaling by a bacterial phytochrome histidine kinase involves a conformational cascade reorganizing the dimeric photoreceptor. Nat Commun, 15, 2024
8U64	Cryo-EM structure of PsBphP in Pfr state, medial PSM only Descriptor: 3-[2-[(Z)-[3-(2-carboxyethyl)-5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-pyrrol-1-ium -2-ylidene]methyl]-5-[(Z)-[(3E)-3-ethylidene-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-4-methyl-1H-pyrrol-3- yl]propanoic acid, histidine kinase Authors: Basore, K, Burgie, E.S, Vierstra, D. Deposit date: 2023-09-13 Release date: 2024-08-21 Last modified: 2024-10-23 Method: ELECTRON MICROSCOPY (3.13 Å) Cite: Signaling by a bacterial phytochrome histidine kinase involves a conformational cascade reorganizing the dimeric photoreceptor. Nat Commun, 15, 2024
8U8Z	Cryo-EM structure of PsBphP in Pr state, extended DHp Descriptor: 3-[2-[(Z)-[3-(2-carboxyethyl)-5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-pyrrol-1-ium -2-ylidene]methyl]-5-[(Z)-[(3E)-3-ethylidene-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-4-methyl-1H-pyrrol-3- yl]propanoic acid, histidine kinase Authors: Basore, K, Burgie, E.S, Vierstra, D. Deposit date: 2023-09-18 Release date: 2024-08-21 Last modified: 2024-10-23 Method: ELECTRON MICROSCOPY (3.25 Å) Cite: Signaling by a bacterial phytochrome histidine kinase involves a conformational cascade reorganizing the dimeric photoreceptor. Nat Commun, 15, 2024
8U4X	Cryo-EM structure of PsBphP in Pr state Descriptor: 3-[2-[(Z)-[3-(2-carboxyethyl)-5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-pyrrol-1-ium -2-ylidene]methyl]-5-[(Z)-[(3E)-3-ethylidene-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-4-methyl-1H-pyrrol-3- yl]propanoic acid, histidine kinase Authors: Basore, K, Burgie, E.S, Vierstra, D. Deposit date: 2023-09-11 Release date: 2024-08-21 Last modified: 2024-10-23 Method: ELECTRON MICROSCOPY (2.81 Å) Cite: Signaling by a bacterial phytochrome histidine kinase involves a conformational cascade reorganizing the dimeric photoreceptor. Nat Commun, 15, 2024
8U62	Cryo-EM structure of PsBphP in Pfr state, Dimer of Dimers FL Descriptor: 3-[2-[(Z)-[3-(2-carboxyethyl)-5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-pyrrol-1-ium -2-ylidene]methyl]-5-[(Z)-[(3E)-3-ethylidene-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-4-methyl-1H-pyrrol-3- yl]propanoic acid, histidine kinase Authors: Basore, K, Burgie, E.S, Vierstra, D. Deposit date: 2023-09-13 Release date: 2024-08-21 Last modified: 2024-11-13 Method: ELECTRON MICROSCOPY (3.3 Å) Cite: Signaling by a bacterial phytochrome histidine kinase involves a conformational cascade reorganizing the dimeric photoreceptor. Nat Commun, 15, 2024
8UPH	Prf state of Stigmatella aurantiaca bacteriophytochrome 2 Descriptor: BILIVERDINE IX ALPHA, Bacteriophytochrome (Light-regulated signal transduction histidine kinase) Authors: Malla, T.N, Schmidt, M, Stojkovic, E.A. Deposit date: 2023-10-22 Release date: 2024-09-25 Method: ELECTRON MICROSCOPY (4.13 Å) Cite: Photoreception and signaling in bacterial phytochrome revealed by single-particle cryo-EM. Sci Adv, 10, 2024
8UQK	Pfr state of photosensory core module of Stigmatella aurantiaca bacteriophytochrome 2 Descriptor: Bacteriophytochrome (Light-regulated signal transduction histidine kinase) Authors: Malla, T.N, Schmidt, M, Stojkovic, E.A. Deposit date: 2023-10-23 Release date: 2024-09-25 Method: ELECTRON MICROSCOPY (4.61 Å) Cite: Photoreception and signaling in bacterial phytochrome revealed by single-particle cryo-EM. Sci Adv, 10, 2024
8UPK	Pr/Pfr heterodimer (hybrid) state of Stigmatella aurantiaca bacteriophytochrome 2 Descriptor: BILIVERDINE IX ALPHA, Bacteriophytochrome (Light-regulated signal transduction histidine kinase) Authors: Malla, T.N, Schmidt, M, Stojkovic, E.A. Deposit date: 2023-10-22 Release date: 2024-09-25 Last modified: 2024-10-30 Method: ELECTRON MICROSCOPY (3.75 Å) Cite: Photoreception and signaling in bacterial phytochrome revealed by single-particle cryo-EM. Sci Adv, 10, 2024
8UPM	Pfr state of Stigmatella aurantiaca bacteriophytochrome 2 Descriptor: BILIVERDINE IX ALPHA, Bacteriophytochrome (Light-regulated signal transduction histidine kinase) Authors: Malla, T.N, Schmidt, M, Stojkovic, E.A. Deposit date: 2023-10-23 Release date: 2024-09-25 Last modified: 2024-11-06 Method: ELECTRON MICROSCOPY (3.75 Å) Cite: Photoreception and signaling in bacterial phytochrome revealed by single-particle cryo-EM. Sci Adv, 10, 2024
8UQI	Pr/Pfr heterodimeric state of photosensory core module of Stigmatella aurantiaca bacteriophytochrome 2 Descriptor: Bacteriophytochrome (Light-regulated signal transduction histidine kinase) Authors: Malla, T.N, Schmidt, M, Stojkovic, E.A. Deposit date: 2023-10-23 Release date: 2024-09-25 Method: ELECTRON MICROSCOPY (4.5 Å) Cite: Photoreception and signaling in bacterial phytochrome revealed by single-particle cryo-EM. Sci Adv, 10, 2024
3CRK	Crystal structure of the PDHK2-L2 complex. Descriptor: Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial, POTASSIUM ION, ... Authors: Green, T.J, Popov, K.M, Luo, M, Grigorian, A, Klyuyeva, A, Tuganova, A. Deposit date: 2008-04-07 Release date: 2008-04-29 Last modified: 2017-10-25 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Structural and functional insights into the molecular mechanisms responsible for the regulation of pyruvate dehydrogenase kinase 2. J.Biol.Chem., 283, 2008
3DGE	Structure of a histidine kinase-response regulator complex reveals insights into Two-component signaling and a novel cis-autophosphorylation mechanism Descriptor: ADENOSINE-5'-DIPHOSPHATE, CITRIC ACID, Response regulator, ... Authors: Casino, P, Marina, A. Deposit date: 2008-06-13 Release date: 2009-07-07 Last modified: 2024-10-09 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Structural Insight into Partner Specificity and Phosphoryl Transfer in Two-Component Signal Transduction. Cell(Cambridge,Mass.), 139, 2009
3A0R	Crystal structure of histidine kinase ThkA (TM1359) in complex with response regulator protein TrrA (TM1360) Descriptor: MERCURY (II) ION, Response regulator, Sensor protein Authors: Yamada, S, Sugimoto, H, Kobayashi, M, Ohno, A, Nakamura, H, Shiro, Y. Deposit date: 2009-03-24 Release date: 2009-10-20 Last modified: 2024-11-13 Method: X-RAY DIFFRACTION (3.8 Å) Cite: Structure of PAS-linked histidine kinase and the response regulator complex Structure, 17, 2009
4XTJ	N-terminal 43 kDa fragment of the E. coli DNA gyrase B subunit grown from 100 mM KCl plus 100 mM NaCl condition Descriptor: CHLORIDE ION, DNA gyrase subunit B, MAGNESIUM ION, ... Authors: Hearnshaw, S.J, Chung, T.T, Stevenson, C.E.M, Maxwell, A, Lawson, D.M. Deposit date: 2015-01-23 Release date: 2015-04-08 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (1.92 Å) Cite: The role of monovalent cations in the ATPase reaction of DNA gyrase Acta Crystallogr.,Sect.D, 71, 2015
4WUC	N-terminal 43 kDa fragment of the E. coli DNA gyrase B subunit grown from 100 mM NaCl condition Descriptor: CHLORIDE ION, DNA gyrase subunit B, MAGNESIUM ION, ... Authors: Hearnshaw, S.J, Chung, T.T, Stevenson, C.E.M, Maxwell, A, Lawson, D.M. Deposit date: 2014-10-31 Release date: 2015-04-08 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (1.9 Å) Cite: The role of monovalent cations in the ATPase reaction of DNA gyrase Acta Crystallogr.,Sect.D, 71, 2015
4WUB	N-terminal 43 kDa fragment of the E. coli DNA gyrase B subunit grown from 100 mM KCl condition Descriptor: CHLORIDE ION, DNA gyrase subunit B, MAGNESIUM ION, ... Authors: Hearnshaw, S.J, Chung, T.T, Stevenson, C.E.M, Maxwell, A, Lawson, D.M. Deposit date: 2014-10-31 Release date: 2015-04-08 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (1.75 Å) Cite: The role of monovalent cations in the ATPase reaction of DNA gyrase Acta Crystallogr.,Sect.D, 71, 2015
4WUD	N-terminal 43 kDa fragment of the E. coli DNA gyrase B subunit grown from no salt condition Descriptor: CHLORIDE ION, DNA gyrase subunit B, MAGNESIUM ION, ... Authors: Hearnshaw, S.J, Chung, T.T, Stevenson, C.E.M, Maxwell, A, Lawson, D.M. Deposit date: 2014-10-31 Release date: 2015-04-08 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (1.95 Å) Cite: The role of monovalent cations in the ATPase reaction of DNA gyrase Acta Crystallogr.,Sect.D, 71, 2015
6QRJ	Crystal structure of ShkA full-length in complex with AMPPNP Descriptor: Hybrid kinase, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER Authors: Dubey, B.N, Schirmer, T. Deposit date: 2019-02-19 Release date: 2020-01-08 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (2.65 Å) Cite: Hybrid histidine kinase activation by cyclic di-GMP-mediated domain liberation. Proc.Natl.Acad.Sci.USA, 117, 2020

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