Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8FBO
DownloadVisualize
BU of 8fbo by Molmil
Improving the secretion of designed protein assemblies through negative design of cryptic transmembrane domains
Descriptor: KWOCA_102
Authors:Wang, J.Y, Khmelinskaia, A, Bera, A.K, King, N.P.
Deposit date:2022-11-29
Release date:2023-03-22
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Improving the secretion of designed protein assemblies through negative design of cryptic transmembrane domains.
Proc.Natl.Acad.Sci.USA, 120, 2023
8FBJ
DownloadVisualize
BU of 8fbj by Molmil
Improving the secretion of designed protein assemblies through negative design of cryptic transmembrane domains
Descriptor: KWOCA_60
Authors:Wang, J.Y, Khmelinskaia, A, Bera, A.K, King, N.P.
Deposit date:2022-11-29
Release date:2023-03-22
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:Improving the secretion of designed protein assemblies through negative design of cryptic transmembrane domains.
Proc.Natl.Acad.Sci.USA, 120, 2023
8FBN
DownloadVisualize
BU of 8fbn by Molmil
Improving the secretion of designed protein assemblies through negative design of cryptic transmembrane domains
Descriptor: KWOCA_73
Authors:Wang, J.Y, Khmelinskaia, A, Bera, A.K, King, N.P.
Deposit date:2022-11-29
Release date:2023-03-22
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (3.04 Å)
Cite:Improving the secretion of designed protein assemblies through negative design of cryptic transmembrane domains.
Proc.Natl.Acad.Sci.USA, 120, 2023
8FBI
DownloadVisualize
BU of 8fbi by Molmil
Improving the secretion of designed protein assemblies through negative design of cryptic transmembrane domains
Descriptor: KWOCA_39
Authors:Wang, J.Y, Khmelinskaia, A, Bera, A.K, King, N.P.
Deposit date:2022-11-29
Release date:2023-03-22
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (3.61 Å)
Cite:Improving the secretion of designed protein assemblies through negative design of cryptic transmembrane domains.
Proc.Natl.Acad.Sci.USA, 120, 2023
8FBK
DownloadVisualize
BU of 8fbk by Molmil
Improving the secretion of designed protein assemblies through negative design of cryptic transmembrane domains
Descriptor: KWOCA_65
Authors:Wang, J.Y, Khmelinskaia, A, Bera, A.K, King, N.P.
Deposit date:2022-11-29
Release date:2023-03-22
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Improving the secretion of designed protein assemblies through negative design of cryptic transmembrane domains.
Proc.Natl.Acad.Sci.USA, 120, 2023
8G0Y
DownloadVisualize
BU of 8g0y by Molmil
Backbone modifications in the inter-helix loop of designed miniprotein oPPalpha: Iva10Asn11 turn
Descriptor: Designed miniprotein oPPalpha: Iva10Asn11 turn
Authors:Harmon, T.W, Horne, W.S.
Deposit date:2023-02-01
Release date:2023-04-05
Last modified:2023-11-15
Method:SOLUTION NMR
Cite:Protein Backbone Alteration in Non-Hairpin beta-Turns: Impacts on Tertiary Folded Structure and Folded Stability.
Chembiochem, 24, 2023
8G0X
DownloadVisualize
BU of 8g0x by Molmil
Backbone modifications in the inter-helix loop of designed miniprotein oPPalpha: Pro10DPro11 turn
Descriptor: Designed miniprotein oPPalpha: Pro10DPro11 turn
Authors:Harmon, T.W, Horne, W.S.
Deposit date:2023-02-01
Release date:2023-04-05
Last modified:2023-06-28
Method:SOLUTION NMR
Cite:Protein Backbone Alteration in Non-Hairpin beta-Turns: Impacts on Tertiary Folded Structure and Folded Stability.
Chembiochem, 24, 2023
6SGB
DownloadVisualize
BU of 6sgb by Molmil
mt-SSU assemblosome of Trypanosoma brucei
Descriptor: 9S rRNA, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Saurer, M, Ramrath, D.J.F, Niemann, M, Calderaro, S, Prange, C, Mattei, S, Scaiola, A, Leitner, A, Bieri, P, Horn, E.K, Leibundgut, M, Boehringer, D, Schneider, A, Ban, N.
Deposit date:2019-08-03
Release date:2019-09-25
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Mitoribosomal small subunit biogenesis in trypanosomes involves an extensive assembly machinery.
Science, 365, 2019
6Y06
DownloadVisualize
BU of 6y06 by Molmil
Moevan: a designed granulopoietic protein by topological rescaffolding
Descriptor: Moevan
Authors:ElGamacy, M, Coles, M.
Deposit date:2020-02-06
Release date:2020-03-18
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Design of novel granulopoietic proteins by topological rescaffolding.
Plos Biol., 18, 2020
6Z0C
DownloadVisualize
BU of 6z0c by Molmil
Structure of in silico modelled artificial Maquette-3 protein
Descriptor: Maquette-3, POTASSIUM ION
Authors:Baumgart, M, Roepke, M, Muehlbauer, M.E, Asami, S, Mader, S.L, Fredriksson, K, Groll, M, Gamiz-Hernandez, A.P, Kaila, V.R.I.
Deposit date:2020-05-08
Release date:2021-03-17
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Design of buried charged networks in artificial proteins
Nat Commun, 12, 2021
6ZYT
DownloadVisualize
BU of 6zyt by Molmil
Monomeric streptavidin with a conjugated biotinylated pyrrolidine
Descriptor: 5-((3aS,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl)-N-((S)-pyrrolidin-3-yl)pentanamide, SULFATE ION, Streptavidin/Rhizavidin Hybrid
Authors:Nodling, A.R, Lipka-Lloyd, M, Tsai, Y.H, Rizkallah, P, Luk, L.Y.P, Jin, Y.
Deposit date:2020-08-03
Release date:2021-08-18
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The role of streptavidin and its variants in catalysis by biotinylated secondary amines.
Org.Biomol.Chem., 19, 2021
7AWZ
DownloadVisualize
BU of 7awz by Molmil
Crystal structure of the computationally designed Scone-E protein
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Scone-E
Authors:Mylemans, B, Voet, A.R.D.
Deposit date:2020-11-09
Release date:2021-01-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structures of Scone: pseudosymmetric folding of a symmetric designer protein.
Acta Crystallogr D Struct Biol, 77, 2021
7AWY
DownloadVisualize
BU of 7awy by Molmil
Crystal structure of the computationally designed Scone-R protein
Descriptor: GLYCEROL, Scone-R
Authors:Mylemans, B, Voet, A.R.D.
Deposit date:2020-11-09
Release date:2021-01-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structures of Scone: pseudosymmetric folding of a symmetric designer protein.
Acta Crystallogr D Struct Biol, 77, 2021
7AX2
DownloadVisualize
BU of 7ax2 by Molmil
Crystal structure of the computationally designed Scone-E protein co-crystallized with STA, form b
Descriptor: Keggin (STA), Monolacunary Keggin (STA), SODIUM ION, ...
Authors:Mylemans, B, Vandebroek, L, Parac-Vogt, T.N, Voet, A.R.D.
Deposit date:2020-11-09
Release date:2021-01-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structures of Scone: pseudosymmetric folding of a symmetric designer protein.
Acta Crystallogr D Struct Biol, 77, 2021
8A3U
DownloadVisualize
BU of 8a3u by Molmil
Crystal structure of a chimeric LOV-Histidine kinase SB2F1 (symmetrical variant, trigonal form with short c-axis)
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, FLAVIN MONONUCLEOTIDE, Putative Sensory box protein,Sensor protein FixL
Authors:Arinkin, V, Batra-Safferling, R, Granzin, J.
Deposit date:2022-06-09
Release date:2023-12-20
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Crystal structure of a chimeric LOV-Histidine kinase SB2F1 (symmetrical variant, trigonal form with short c-axis)
To Be Published
8A7F
DownloadVisualize
BU of 8a7f by Molmil
Crystal structure of a chimeric LOV-Histidine kinase SB2F1-I66R mutant (asymmetrical variant, trigonal form with long c axis)
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, FLAVIN MONONUCLEOTIDE, Putative Sensory box protein,Sensor protein FixL
Authors:Batra-Safferling, R, Arinkin, V, Granzin, J.
Deposit date:2022-06-21
Release date:2024-01-10
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:Crystal structure of a chimeric LOV-Histidine kinase SB2F1-I66R mutant (asymmetrical variant, trigonal form with long c axis)
To Be Published
8A7H
DownloadVisualize
BU of 8a7h by Molmil
Crystal structure of a chimeric LOV-Histidine kinase SB2F1-I66R mutant (light state; asymmetrical variant, trigonal form with long c axis)
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Flavin mononucleotide (semi-quinone intermediate), Putative Sensory box protein,Sensor protein FixL
Authors:Arinkin, V, Granzin, J, Batra-Safferling, R.
Deposit date:2022-06-21
Release date:2024-01-10
Method:X-RAY DIFFRACTION (3.145 Å)
Cite:Crystal structure of a chimeric LOV-Histidine kinase SB2F1-I66R mutant (light state; asymmetrical variant, trigonal form with long c axis)
To Be Published
8AAG
DownloadVisualize
BU of 8aag by Molmil
H1-bound palindromic nucleosome, state 1
Descriptor: DNA/RNA (185-MER), Histone H1.0-B, Histone H2A type 1, ...
Authors:Alegrio Louro, J, Beinsteiner, B, Cheng, T.C, Patel, A.K.M, Boopathi, R, Angelov, D, Hamiche, A, Bednar, J, Kale, S, Dimitrov, S, Klaholz, B.
Deposit date:2022-07-01
Release date:2022-12-14
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (10 Å)
Cite:Nucleosome dyad determines the H1 C-terminus collapse on distinct DNA arms.
Structure, 31, 2023
2LFF
DownloadVisualize
BU of 2lff by Molmil
Solution structure of Diiron protein in presence of 8 eq Zn2+, Northeast Structural Genomics consortium target OR21
Descriptor: Diiron protein, ZINC ION
Authors:Pires, M, Wu, Y, Mills, J.L, Reig, A, Englander, W, Degrado, W, Montelione, G.T, Szyperski, T, Northeast Structural Genomics Consortium (NESG)
Deposit date:2011-06-29
Release date:2011-08-24
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution structure of Diiron protein in presence of 8 eq Zn2+
To be Published
6QB2
DownloadVisualize
BU of 6qb2 by Molmil
Crystal structure of the cystatin-based engineered protein scaffold SQT-1C
Descriptor: Monomer of SQT-1C
Authors:Levy, C.W.
Deposit date:2018-12-20
Release date:2019-07-03
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Studies of the oligomerisation mechanism of a cystatin-based engineered protein scaffold.
Sci Rep, 9, 2019
2L99
DownloadVisualize
BU of 2l99 by Molmil
Solution structure of LAK160-P10
Descriptor: LAK160-P10
Authors:Vermeer, L.S, Bui, T.T, Lan, Y, Jumagulova, E, Kozlowska, J, McIntyre, C, Drake, A.F, Mason, J.A.
Deposit date:2011-02-03
Release date:2012-02-01
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:The role of proline induced conformational flexibility in determining the antibacterial potency of linear cationic alpha-helical peptides
To be Published
2L9A
DownloadVisualize
BU of 2l9a by Molmil
Solution structure of LAK160-P12
Descriptor: LAK160-P12
Authors:Vermeer, L.S, Bui, T.T, Lan, Y, Jumagulova, E, Kozlowska, J, McIntyre, C, Drake, A.F, Mason, J.A.
Deposit date:2011-02-03
Release date:2012-02-01
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:The role of proline induced conformational flexibility in determining the antibacterial potency of linear cationic alpha-helical peptides
To be Published
2LCH
DownloadVisualize
BU of 2lch by Molmil
Solution NMR Structure of a Protein With a Redesigned Hydrophobic Core, Northeast Structural Genomics Consortium Target OR38
Descriptor: Protein OR38
Authors:Mills, J.L, Murphy, G, Miley, M, Machius, M, Kuhlman, B, Montelione, G.T, Szyperski, T, Northeast Structural Genomics Consortium (NESG)
Deposit date:2011-04-29
Release date:2011-05-25
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution NMR Structure of a Protein With a Redesigned Hydrophobic Core, Northeast Structural Genomics Consortium Target OR38
To be Published
2L6B
DownloadVisualize
BU of 2l6b by Molmil
NRC consensus ankyrin repeat protein solution structure
Descriptor: NR1C
Authors:Aksel, T, Majumdar, A, Barrick, D.
Deposit date:2010-11-17
Release date:2011-03-23
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The contribution of entropy, enthalpy, and hydrophobic desolvation to cooperativity in repeat-protein folding.
Structure, 19, 2011
2LL5
DownloadVisualize
BU of 2ll5 by Molmil
Cyclo-TC1 Trp-cage
Descriptor: Cyclo-TC1
Authors:Lin, J.C, Scian, M, Andersen, N.H.
Deposit date:2011-10-26
Release date:2012-07-18
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Crystal and NMR structures of a Trp-cage mini-protein benchmark for computational fold prediction.
Proc.Natl.Acad.Sci.USA, 109, 2012

222926

数据于2024-07-24公开中

PDB statisticsPDBj update infoContact PDBjnumon