Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8ON2
DownloadVisualize
BU of 8on2 by Molmil
NI,FE-CODH -600mV state : 24 h Dioxygen Exposure
Descriptor: Carbon monoxide dehydrogenase 2, FE (III) ION, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Basak, Y, Jeoung, J.-H, Dobbek, H.
Deposit date:2023-03-31
Release date:2023-12-06
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Stepwise O 2 -Induced Rearrangement and Disassembly of the [NiFe 4 (OH)( mu 3 -S) 4 ] Active Site Cluster of CO Dehydrogenase.
Angew.Chem.Int.Ed.Engl., 62, 2023
8OMX
DownloadVisualize
BU of 8omx by Molmil
NI,FE-CODH -600mV state : 1 min Dioxygen Exposure
Descriptor: Carbon monoxide dehydrogenase 2, FE (II) ION, FE(4)-NI(1)-S(5) CLUSTER, ...
Authors:Basak, Y, Jeoung, J.-H, Dobbek, H.
Deposit date:2023-03-31
Release date:2023-12-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Stepwise O 2 -Induced Rearrangement and Disassembly of the [NiFe 4 (OH)( mu 3 -S) 4 ] Active Site Cluster of CO Dehydrogenase.
Angew.Chem.Int.Ed.Engl., 62, 2023
8ON0
DownloadVisualize
BU of 8on0 by Molmil
NI,FE-CODH -600mV state : 90 min Dioxygen Exposure
Descriptor: Carbon monoxide dehydrogenase 2, FE (II) ION, FE (III) ION, ...
Authors:Basak, Y, Jeoung, J.-H, Dobbek, H.
Deposit date:2023-03-31
Release date:2023-12-06
Method:X-RAY DIFFRACTION (1.29 Å)
Cite:Stepwise O 2 -Induced Rearrangement and Disassembly of the [NiFe 4 (OH)( mu 3 -S) 4 ] Active Site Cluster of CO Dehydrogenase.
Angew.Chem.Int.Ed.Engl., 62, 2023
8ON1
DownloadVisualize
BU of 8on1 by Molmil
NI,FE-CODH -600mV state : 4 h Dioxygen Exposure
Descriptor: Carbon monoxide dehydrogenase 2, FE (II) ION, FE (III) ION, ...
Authors:Basak, Y, Jeoung, J.-H, Dobbek, H.
Deposit date:2023-03-31
Release date:2023-12-06
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Stepwise O 2 -Induced Rearrangement and Disassembly of the [NiFe 4 (OH)( mu 3 -S) 4 ] Active Site Cluster of CO Dehydrogenase.
Angew.Chem.Int.Ed.Engl., 62, 2023
8ON3
DownloadVisualize
BU of 8on3 by Molmil
NI,FE-CODH -320mV + CN state : 24 h Dioxygen Exposure
Descriptor: Carbon monoxide dehydrogenase 2, DI(HYDROXYETHYL)ETHER, FE (II) ION, ...
Authors:Basak, Y, Jeoung, J.-H, Dobbek, H.
Deposit date:2023-03-31
Release date:2023-12-06
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Stepwise O 2 -Induced Rearrangement and Disassembly of the [NiFe 4 (OH)( mu 3 -S) 4 ] Active Site Cluster of CO Dehydrogenase.
Angew.Chem.Int.Ed.Engl., 62, 2023
8EMA
DownloadVisualize
BU of 8ema by Molmil
mouse full length B cell receptor
Descriptor: Anti-human Langerin 2G3 lambda chain, B-cell antigen receptor complex-associated protein alpha chain, B-cell antigen receptor complex-associated protein beta chain, ...
Authors:Ying, D, Xiong, P, Michael, R.
Deposit date:2022-09-27
Release date:2022-11-16
Last modified:2022-12-07
Method:ELECTRON MICROSCOPY (8.2 Å)
Cite:Structural principles of B cell antigen receptor assembly.
Nature, 612, 2022
6TVL
DownloadVisualize
BU of 6tvl by Molmil
Hen Egg White Lysozyme in complex with a "half sandwich"-type Ru(II) coordination compound
Descriptor: CHLORIDE ION, Lysozyme C, SODIUM ION, ...
Authors:Chiniadis, L, Giastas, P, Bratsos, I, Papakyriakou, A.
Deposit date:2020-01-10
Release date:2020-04-29
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.395 Å)
Cite:High-resolution crystal structures of a "half sandwich"-type Ru(II) coordination compound bound to hen egg-white lysozyme and proteinase K.
J.Biol.Inorg.Chem., 25, 2020
1SW2
DownloadVisualize
BU of 1sw2 by Molmil
Crystal structure of ProX from Archeoglobus fulgidus in complex with glycine betaine
Descriptor: TRIMETHYL GLYCINE, osmoprotection protein (proX)
Authors:Schiefner, A, Holtmann, G, Diederichs, K, Welte, W, Bremer, E.
Deposit date:2004-03-30
Release date:2004-09-14
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis for the binding of compatible solutes by ProX from the hyperthermophilic archaeon Archaeoglobus fulgidus.
J.Biol.Chem., 279, 2004
8DAO
DownloadVisualize
BU of 8dao by Molmil
Crystal structure of SARS-CoV-2 spike stem fusion peptide in complex with neutralizing antibody COV44-79
Descriptor: COV44-79 heavy chain constant domain, COV44-79 heavy chain variable domain, COV44-79 light chain constant domain, ...
Authors:Lin, T.H, Lee, C.C.D, Yuan, M, Wilson, I.A.
Deposit date:2022-06-13
Release date:2022-07-27
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Broadly neutralizing antibodies target the coronavirus fusion peptide.
Science, 377, 2022
8RNW
DownloadVisualize
BU of 8rnw by Molmil
Hen Egg White Lysozyme soaked with trans-Ru(DMSO)4Cl2
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Lysozyme C, ...
Authors:Oszajca, M, Flejszar, M, Szura, A, Drozdz, P, Brindell, M, Kurpiewska, K.
Deposit date:2024-01-11
Release date:2024-01-24
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.12 Å)
Cite:Exploring the coordination chemistry of ruthenium complexes with lysozymes: structural and in-solution studies.
Front Chem, 12, 2024
8RNV
DownloadVisualize
BU of 8rnv by Molmil
Hen Egg White Lysozyme soaked with cis-Ru(DMSO)4Cl2
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, CHLORIDE ION, ...
Authors:Oszajca, M, Flejszar, M, Szura, A, Drozdz, P, Brindell, M, Kurpiewska, K.
Deposit date:2024-01-11
Release date:2024-01-24
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.08 Å)
Cite:Exploring the coordination chemistry of ruthenium complexes with lysozymes: structural and in-solution studies.
Front Chem, 12, 2024
8RNX
DownloadVisualize
BU of 8rnx by Molmil
Hen Egg White Lysozyme soaked with [HIsq][trans-RuCl4(DMSO)(Isq)]
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Lysozyme C, ...
Authors:Oszajca, M, Flejszar, M, Szura, A, Drozdz, P, Brindell, M, Kurpiewska, K.
Deposit date:2024-01-11
Release date:2024-01-24
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Exploring the coordination chemistry of ruthenium complexes with lysozymes: structural and in-solution studies.
Front Chem, 12, 2024
8RNY
DownloadVisualize
BU of 8rny by Molmil
Hen Egg White Lysozyme soaked with with [H2Ind][trans-RuCl4(DMSO)(HInd)]
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Lysozyme C, ...
Authors:Oszajca, M, Flejszar, M, Szura, A, Drozdz, P, Brindell, M, Kurpiewska, K.
Deposit date:2024-01-11
Release date:2024-02-07
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.02 Å)
Cite:Exploring the coordination chemistry of ruthenium complexes with lysozymes: structural and in-solution studies.
Front Chem, 12, 2024
6V7L
DownloadVisualize
BU of 6v7l by Molmil
The structure of the P212121 crystal form of canavalin at 173 K
Descriptor: BENZOIC ACID, Canavalin
Authors:McPherson, A.
Deposit date:2019-12-08
Release date:2020-02-19
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Binding of benzoic acid and anions within the cupin domains of the vicilin protein canavalin from jack bean (Canavalia ensiformis): Crystal structures.
Biochem.Biophys.Res.Commun., 524, 2020
1SW4
DownloadVisualize
BU of 1sw4 by Molmil
Crystal structure of ProX from Archeoglobus fulgidus in complex with trimethyl ammonium
Descriptor: CHLORIDE ION, TETRAMETHYLAMMONIUM ION, ZINC ION, ...
Authors:Schiefner, A, Holtmann, G, Diederichs, K, Welte, W, Bremer, E.
Deposit date:2004-03-30
Release date:2004-09-14
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis for the binding of compatible solutes by ProX from the hyperthermophilic archaeon Archaeoglobus fulgidus.
J.Biol.Chem., 279, 2004
1SW1
DownloadVisualize
BU of 1sw1 by Molmil
Crystal structure of ProX from Archeoglobus fulgidus in complex with proline betaine
Descriptor: 1,1-DIMETHYL-PROLINIUM, ZINC ION, osmoprotection protein (proX)
Authors:Schiefner, A, Holtmann, G, Diederichs, K, Welte, W, Bremer, E.
Deposit date:2004-03-30
Release date:2004-09-14
Last modified:2021-10-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis for the binding of compatible solutes by ProX from the hyperthermophilic archaeon Archaeoglobus fulgidus.
J.Biol.Chem., 279, 2004
2ALY
DownloadVisualize
BU of 2aly by Molmil
Crystal Structure of T.Thermophilus Phenylalanyl-tRNA synthetase complexed with 5'-O-[N-(L-tyrosyl)sulphamoyl]adenosine
Descriptor: 5'-O-[N-(L-TYROSYL)SULFAMOYL]ADENOSINE, MANGANESE (II) ION, Phenylalanyl-tRNA synthetase alpha chain, ...
Authors:Kotik-Kogan, O.M, Moor, N.A, Tworowski, D.E, Safro, M.G.
Deposit date:2005-08-04
Release date:2005-12-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural Basis for Discrimination of L-Phenylalanine from L-Tyrosine by Phenylalanyl-tRNA Synthetase
Structure, 13, 2005
4RXZ
DownloadVisualize
BU of 4rxz by Molmil
Crystal Structure of MDMX phosporylated Tyr99 in complex with a 12-mer peptide
Descriptor: 12-MER PEPTIDE INHIBITOR, Protein Mdm4
Authors:Pazgier, M, Gohain, N, Tolbert, W.D.
Deposit date:2014-12-12
Release date:2015-07-22
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural basis of how stress-induced MDMX phosphorylation activates p53.
Oncogene, 35, 2016
1G79
DownloadVisualize
BU of 1g79 by Molmil
X-RAY STRUCTURE OF ESCHERICHIA COLI PYRIDOXINE 5'-PHOSPHATE OXIDASE COMPLEXED WITH PYRIDOXAL 5'-PHOSPHATE AT 2.0 A RESOLUTION
Descriptor: BETA-MERCAPTOETHANOL, FLAVIN MONONUCLEOTIDE, PHOSPHATE ION, ...
Authors:Safo, M.K, Musayev, F.N, di Salvo, M.L, Schirch, V.
Deposit date:2000-11-09
Release date:2000-11-29
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:X-ray structure of Escherichia coli pyridoxine 5'-phosphate oxidase complexed with pyridoxal 5'-phosphate at 2.0 A resolution.
J.Mol.Biol., 310, 2001
1LGN
DownloadVisualize
BU of 1lgn by Molmil
DECAMERIC DAMP COMPLEX OF HUMAN SERUM AMYLOID P COMPONENT
Descriptor: 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE, CALCIUM ION, SERUM AMYLOID P COMPONENT
Authors:Hohenester, E, Pepys, M.B, Wood, S.P.
Deposit date:1996-12-04
Release date:1997-12-24
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of a decameric complex of human serum amyloid P component with bound dAMP.
J.Mol.Biol., 269, 1997
2YWV
DownloadVisualize
BU of 2ywv by Molmil
Crystal structure of SAICAR synthetase from Geobacillus kaustophilus
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Phosphoribosylaminoimidazole succinocarboxamide synthetase, ...
Authors:Kanagawa, M, Baba, S, Kuramitsu, S, Yokoyama, S, Kawai, G, Sampei, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-23
Release date:2007-10-23
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure of SAICAR synthetase from Geobacillus kaustophilus
To be Published
1QF6
DownloadVisualize
BU of 1qf6 by Molmil
STRUCTURE OF E. COLI THREONYL-TRNA SYNTHETASE COMPLEXED WITH ITS COGNATE TRNA
Descriptor: ADENOSINE MONOPHOSPHATE, THREONINE TRNA, THREONYL-TRNA SYNTHETASE, ...
Authors:Sankaranarayanan, R, Dock-Bregeon, A.C, Rees, B, Moras, D.
Deposit date:1999-04-06
Release date:1999-05-06
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The structure of threonyl-tRNA synthetase-tRNA(Thr) complex enlightens its repressor activity and reveals an essential zinc ion in the active site
Cell(Cambridge,Mass.), 97, 1999
2BJM
DownloadVisualize
BU of 2bjm by Molmil
SPE7:Anthrone Complex
Descriptor: ANTHRONE, IGE SPE7 HEAVY CHAIN, IGE SPE7 LIGHT CHAIN
Authors:James, L.C, Tawfik, D.S.
Deposit date:2005-02-04
Release date:2005-08-18
Last modified:2013-10-30
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structure and Kinetics of a Transient Antibody Binding Intermediate Reveal a Kinetic Discrimination Mechanism in Antigen Recognition
Proc.Natl.Acad.Sci.USA, 102, 2005
7MX9
DownloadVisualize
BU of 7mx9 by Molmil
Crystal structure of the SARS-CoV-2 ORF8 accessory protein
Descriptor: ORF8 protein
Authors:Bailey-Elkin, B.A, Stetefeld, J.
Deposit date:2021-05-18
Release date:2023-01-25
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The unique ORF8 protein of SARS-CoV-2 binds to human dendritic cells and induces a cytokine storm
To Be Published
5XC0
DownloadVisualize
BU of 5xc0 by Molmil
Crystal structure of an aromatic mutant (W6A) of an alkali thermostable GH10 Xylanase from Bacillus sp. NG-27
Descriptor: Beta-xylanase, MAGNESIUM ION, SODIUM ION
Authors:Bansia, H, Mahanta, P, Ramakumar, S.
Deposit date:2017-03-21
Release date:2018-03-28
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Small Glycols Discover Cryptic Pockets on Proteins for Fragment-Based Approaches.
J.Chem.Inf.Model., 2021

226262

数据于2024-10-16公开中

PDB statisticsPDBj update infoContact PDBjnumon