Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7QFD
DownloadVisualize
BU of 7qfd by Molmil
Crystal structure of a bacterial pyranose 2-oxidase complex with D-glucose
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, FLAVIN-ADENINE DINUCLEOTIDE, GMC oxidoreductase family protein, ...
Authors:Borges, P.T, Frazao, T, Taborda, A, Frazao, C, Martins, L.O.
Deposit date:2021-12-05
Release date:2023-07-05
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Mechanistic insights into glycoside 3-oxidases involved in C-glycoside metabolism in soil microorganisms.
Nat Commun, 14, 2023
4LEM
DownloadVisualize
BU of 4lem by Molmil
Crystal structure of the Delta-pyrroline-5-carboxylate dehydrogenase from Mycobacterium tuberculosis
Descriptor: 1-pyrroline-5-carboxylate dehydrogenase, COBALAMIN, MAGNESIUM ION
Authors:Lagautriere, T, Bashiri, G, Baker, E.N.
Deposit date:2013-06-26
Release date:2014-05-14
Last modified:2015-03-04
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Use of a "silver bullet" to resolve crystal lattice dislocation disorder: A cobalamin complex of Delta (1)-pyrroline-5-carboxylate dehydrogenase from Mycobacterium tuberculosis.
J.Struct.Biol., 189, 2015
3FIM
DownloadVisualize
BU of 3fim by Molmil
Crystal structure of aryl-alcohol-oxidase from Pleurotus eryingii
Descriptor: Aryl-alcohol oxidase, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Fernandez, I.S.
Deposit date:2008-12-12
Release date:2009-11-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Novel structural features in the GMC family of oxidoreductases revealed by the crystal structure of fungal aryl-alcohol oxidase
Acta Crystallogr.,Sect.D, 65, 2009
2IMR
DownloadVisualize
BU of 2imr by Molmil
Crystal structure of amidohydrolase DR_0824 from Deinococcus radiodurans
Descriptor: Hypothetical protein DR_0824, ZINC ION
Authors:Eswaramoorthy, S, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2006-10-04
Release date:2006-10-17
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Crystal structure of a hypothetical protein DR_0824 from Deinococcus radiodurans
To be Published
6AFF
DownloadVisualize
BU of 6aff by Molmil
DJ-1 with compound 8
Descriptor: CHLORIDE ION, Protein/nucleic acid deglycase DJ-1, methyl 2,3-bis(oxidanylidene)-1~{H}-indole-7-carboxylate
Authors:Caaveiro, J.M.M, Tashiro, S, Tsumoto, K.
Deposit date:2018-08-08
Release date:2018-08-29
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Discovery and Optimization of Inhibitors of the Parkinson's Disease Associated Protein DJ-1.
ACS Chem. Biol., 13, 2018
6J95
DownloadVisualize
BU of 6j95 by Molmil
Crystal structure of CYP97A3 in complex with retinal
Descriptor: PROTOPORPHYRIN IX CONTAINING FE, Protein LUTEIN DEFICIENT 5, chloroplastic, ...
Authors:Niu, G, Guo, Q, Wang, J, Zhao, S.
Deposit date:2019-01-22
Release date:2020-01-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.002 Å)
Cite:Structural basis for plant lutein biosynthesis from alpha-carotene.
Proc.Natl.Acad.Sci.USA, 117, 2020
4QBL
DownloadVisualize
BU of 4qbl by Molmil
VRR_NUC domain protein
Descriptor: MAGNESIUM ION, VRR-NUC
Authors:Smerdon, S.J, Pennell, S, Li, J.
Deposit date:2014-05-08
Release date:2014-09-10
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:FAN1 activity on asymmetric repair intermediates is mediated by an atypical monomeric virus-type replication-repair nuclease domain.
Cell Rep, 8, 2014
5YLZ
DownloadVisualize
BU of 5ylz by Molmil
Cryo-EM Structure of the Post-catalytic Spliceosome from Saccharomyces cerevisiae at 3.6 angstrom
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, INOSITOL HEXAKISPHOSPHATE, MAGNESIUM ION, ...
Authors:Wan, R, Yan, C, Bai, R, Lei, J, Shi, Y.
Deposit date:2017-10-20
Release date:2018-07-18
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structure of the Post-catalytic Spliceosome from Saccharomyces cerevisiae
Cell, 171, 2017
4PWV
DownloadVisualize
BU of 4pwv by Molmil
Structure of P450sky (CYP163B3), a cytochrome P450 from skyllamycin biosynthesis in complex with a peptidyl carrier protein domain
Descriptor: P450 monooxygenase, PROTOPORPHYRIN IX CONTAINING FE, Peptide synthetase, ...
Authors:Haslinger, K, Cryle, M.J.
Deposit date:2014-03-21
Release date:2014-07-23
Last modified:2014-08-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:The structure of a transient complex of a nonribosomal Peptide synthetase and a cytochrome p450 monooxygenase.
Angew.Chem.Int.Ed.Engl., 53, 2014
2IUQ
DownloadVisualize
BU of 2iuq by Molmil
CRYSTAL STRUCTURE OF DITHIONITE-REDUCED AROMATIC AMINE DEHYDROGENASE (AADH) FROM ALCALIGENES FAECALIS IN COMPLEX WITH TRYPTAMINE
Descriptor: 2-(1H-INDOL-3-YL)ETHANAMINE, AROMATIC AMINE DEHYDROGENASE ALPHA SUBUNIT, AROMATIC AMINE DEHYDROGENASE BETA SUBUNIT
Authors:Roujeinikova, A, Scrutton, N, Leys, D.
Deposit date:2006-06-07
Release date:2006-09-20
Last modified:2019-02-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Atomic Level Insight Into the Oxidative Half-Reaction of Aromatic Amine Dehydrogenase.
J.Biol.Chem., 281, 2006
4QCE
DownloadVisualize
BU of 4qce by Molmil
Crystal structure of recombinant alkali thermostable GH10 xylanase from Bacillus sp. NG-27
Descriptor: Alkaline thermostable endoxylanase, MAGNESIUM ION, SODIUM ION
Authors:Mahanta, P, Bhardwaj, A, Reddy, V.S, Ramakumar, S.
Deposit date:2014-05-11
Release date:2015-05-20
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Structural insights into N-terminal to C-terminal interactions and implications for thermostability of a (beta/alpha)8-triosephosphate isomerase barrel enzyme
Febs J., 282, 2015
6J9S
DownloadVisualize
BU of 6j9s by Molmil
Penta mutant of Lactobacillus casei lactate dehydrogenase
Descriptor: GLYCEROL, L-lactate dehydrogenase, SULFATE ION
Authors:Arai, K, Miyanaga, A, Uchikoba, H, Fushinobu, S, Taguchi, H.
Deposit date:2019-01-24
Release date:2019-02-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of penta mutant of L-lactate dehydrogenase from Lactobacillus casei
To Be Published
5YSW
DownloadVisualize
BU of 5ysw by Molmil
Crystal Structure Analysis of Rif16 in complex with R-L
Descriptor: (2S,12E,14E,16S,17S,18R,19R,20R,21S,22R,23S,24E)-21-(acetyloxy)-5,6,17,19-tetrahydroxy-23-methoxy-2,4,12,16,18,20,22-heptamethyl-1,11-dioxo-1,2-dihydro-2,7-(epoxypentadeca[1,11,13]trienoimino)naphtho[2,1-b]furan-9-yl hydroxyacetate, Cytochrome P450, PROTOPORPHYRIN IX CONTAINING FE
Authors:Li, F.W, Qi, F.F, Xiao, Y.L, Zhao, G.P, Li, S.Y.
Deposit date:2017-11-15
Release date:2018-07-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Deciphering the late steps of rifamycin biosynthesis.
Nat Commun, 9, 2018
4LA3
DownloadVisualize
BU of 4la3 by Molmil
Crystal structure of dimethylsulphoniopropionate (DMSP) lyase DddQ Y131A in complex with DMSP
Descriptor: 3-(dimethyl-lambda~4~-sulfanyl)propanoic acid, Dimethylsulphoniopropionate (DMSP) lyase DddQ, ZINC ION
Authors:Zhang, Y, Li, C.
Deposit date:2013-06-19
Release date:2014-01-15
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.701 Å)
Cite:Molecular insight into bacterial cleavage of oceanic dimethylsulfoniopropionate into dimethyl sulfide
Proc.Natl.Acad.Sci.USA, 111, 2014
4PXE
DownloadVisualize
BU of 4pxe by Molmil
The crystal structure of AtUAH in complex with glyoxylate
Descriptor: GLYOXYLIC ACID, MANGANESE (II) ION, Ureidoglycolate hydrolase
Authors:Shin, I, Rhee, S.
Deposit date:2014-03-23
Release date:2014-07-23
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.449 Å)
Cite:Structural insights into the substrate specificity of (s)-ureidoglycolate amidohydrolase and its comparison with allantoate amidohydrolase.
J.Mol.Biol., 426, 2014
6JBY
DownloadVisualize
BU of 6jby by Molmil
Crystal structure of endo-deglycosylated hydroxynitrile lyase isozyme 5 of Prunus communis
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Zheng, Y.C, Li, F.L, Yu, H.L, Xu, J.H.
Deposit date:2019-01-27
Release date:2020-04-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure-Guided Tuning of a Hydroxynitrile Lyase to Accept Rigid Pharmaco Aldehydes.
Acs Catalysis, 2020
2IXU
DownloadVisualize
BU of 2ixu by Molmil
Crystal structure of the modular Cpl-1 endolysin complexed with a peptidoglycan analogue (wild-type endolysin)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-N-acetyl-alpha-muramic acid, ALANINE, D-alpha-glutamine, ...
Authors:Perez-Dorado, I, Hermoso, J.A.
Deposit date:2006-07-11
Release date:2007-07-03
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Elucidation of the Molecular Recognition of Bacterial Cell Wall by Modular Pneumococcal Phage Endolysin Cpl-1.
J.Biol.Chem., 282, 2007
6AGS
DownloadVisualize
BU of 6ags by Molmil
Structural insights for non-natural cofactor binding by the L310R/Q401C mutant of malic enzyme from Escherichia coli
Descriptor: NAD-dependent malic enzyme
Authors:Liu, Y.X, Liu, W.J, Ji, D.B, Zhao, K.
Deposit date:2018-08-13
Release date:2019-08-14
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Structural Insights into Malic Enzyme Variants Favoring an Unnatural Redox Cofactor.
Chembiochem, 22, 2021
5XXM
DownloadVisualize
BU of 5xxm by Molmil
Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with gluconolactone
Descriptor: D-glucono-1,5-lactone, MAGNESIUM ION, Periplasmic beta-glucosidase, ...
Authors:Nakajima, M, Ishiguro, R, Tanaka, N, Abe, K, Maeda, T, Miyanaga, A, Takahash, Y, Sugimoto, N, Nakai, H, Taguchi, H.
Deposit date:2017-07-04
Release date:2017-12-13
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Function and structure relationships of a beta-1,2-glucooligosaccharide-degrading beta-glucosidase.
FEBS Lett., 591, 2017
2IPF
DownloadVisualize
BU of 2ipf by Molmil
Crystal structure of 17alpha-hydroxysteroid dehydrogenase in complex with NADP+ and epi-testosterone
Descriptor: (10ALPHA,13ALPHA,14BETA,17ALPHA)-17-HYDROXYANDROST-4-EN-3-ONE, (3(17)alpha-hydroxysteroid dehydrogenase), 1,2-ETHANEDIOL, ...
Authors:Faucher, F, Cantin, L, Pereira de Jesus-Tran, K, Luu-the, V, Labrie, F, Breton, R.
Deposit date:2006-10-12
Release date:2007-06-19
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Mouse 17alpha-Hydroxysteroid Dehydrogenase (AKR1C21) Binds Steroids Differently from other Aldo-keto Reductases: Identification and Characterization of Amino Acid Residues Critical for Substrate Binding.
J.Mol.Biol., 369, 2007
4KUE
DownloadVisualize
BU of 4kue by Molmil
Crystal structure of 3-hydroxybutylryl-CoA dehydrogenase from Clostridium butyricum
Descriptor: 3-hydroxybutyryl-CoA dehydrogenase
Authors:Kim, E.J, Kim, S, Kim, K.J.
Deposit date:2013-05-22
Release date:2014-05-28
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of (S)-3-hydroxybutylryl-CoA dehydrogenase form the n-butanol sysnthesizing bacterium, Clostridium butyricum
to be published
6AHL
DownloadVisualize
BU of 6ahl by Molmil
Crystal Structure of HEWL in complex with Cinnamaldehyde (in the aroma form) after 5 hours under fibrillation conditions
Descriptor: 4-CARBOXYCINNAMIC ACID, ACETATE ION, CHLORIDE ION, ...
Authors:Seraj, Z, Seyedarabi, A.
Deposit date:2018-08-19
Release date:2019-08-28
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Cinnamaldehyde and Phenyl Ethyl Alcohol promote the entrapment of intermediate species of HEWL, as revealed by structural, kinetics and thermal stability studies.
Sci Rep, 9, 2019
6AFJ
DownloadVisualize
BU of 6afj by Molmil
DJ-1 with compound 13
Descriptor: CHLORIDE ION, Protein/nucleic acid deglycase DJ-1, butyl 2-[2,3-bis(oxidanylidene)indol-1-yl]ethanoate
Authors:Caaveiro, J.M.M, Tashiro, S, Tsumoto, K.
Deposit date:2018-08-08
Release date:2018-08-29
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Discovery and Optimization of Inhibitors of the Parkinson's Disease Associated Protein DJ-1.
ACS Chem. Biol., 13, 2018
3FLD
DownloadVisualize
BU of 3fld by Molmil
Crystal structure of the trai c-terminal domain
Descriptor: Protein traI, SULFATE ION
Authors:Guogas, L.M, Kennedy, S.A, Redinbo, M.R.
Deposit date:2008-12-18
Release date:2009-02-10
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:A novel fold in the TraI relaxase-helicase c-terminal domain is essential for conjugative DNA transfer.
J.Mol.Biol., 386, 2009
7WH1
DownloadVisualize
BU of 7wh1 by Molmil
structure of C elegans BCMO-2
Descriptor: Beta-Carotene 15,15'-MonoOxygenase, FE (III) ION, GLYCEROL, ...
Authors:Pan, W, Liu, L.
Deposit date:2021-12-29
Release date:2022-02-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural and Functional Analysis of Nonheme Iron Enzymes BCMO-1 and BCMO-2 from Caenorhabditis elegans .
Front Mol Biosci, 9, 2022

224004

数据于2024-08-21公开中

PDB statisticsPDBj update infoContact PDBjnumon