Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3QOP
DownloadVisualize
BU of 3qop by Molmil
Domain-domain flexibility leads to allostery within the camp receptor protein (CRP)
Descriptor: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Catabolite gene activator, GLYCEROL
Authors:Knapp, J, White, M.A, Lee, J.C.
Deposit date:2011-02-10
Release date:2012-04-04
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Domain-Domain Flexibility Leads to Allostery within the Camp Receptor Protein (Crp)
To be Published
6FQ2
DownloadVisualize
BU of 6fq2 by Molmil
Structure of minimal sequence for left -handed G-quadruplex formation
Descriptor: DNA (5'-D(*GP*TP*GP*GP*TP*GP*GP*TP*GP*GP*TP*G)-3'), POTASSIUM ION
Authors:Schmitt, E, Mechulam, Y, Phan, A.T, Heddi, B, Bakalar, B.
Deposit date:2018-02-13
Release date:2018-12-05
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:A Minimal Sequence for Left-Handed G-Quadruplex Formation.
Angew. Chem. Int. Ed. Engl., 58, 2019
3ROU
DownloadVisualize
BU of 3rou by Molmil
Domain-domain flexibility leads to allostery within the camp receptor protein (CRP)
Descriptor: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Catabolite gene activator
Authors:Knapp, J, White, M.A, Lee, J.C.
Deposit date:2011-04-26
Release date:2012-05-02
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Domain-Domain Flexibility Leads to Allostery within the Cam Receptor Protein (Crp)
To be Published
3RPQ
DownloadVisualize
BU of 3rpq by Molmil
Domain-domain flexibility leads to allostery within the camp receptor protein (CRP)
Descriptor: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Catabolite gene activator, PHOSPHATE ION
Authors:Knapp, J, White, M.A, Lee, J.C.
Deposit date:2011-04-27
Release date:2012-05-02
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Domain-Domain Flexibility Leads to Allostery within the Cam Receptor Protein (Crp)
To be Published
3RDI
DownloadVisualize
BU of 3rdi by Molmil
Domain-domain flexibility leads to allostery within the camp receptor protein (CRP)
Descriptor: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Catabolite gene activator
Authors:Knapp, J, White, M.A, Lee, J.C.
Deposit date:2011-04-01
Release date:2012-05-02
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Domain-Domain Flexibility Leads to Allostery within the Cam Receptor Protein (Crp)
To be Published
3RYP
DownloadVisualize
BU of 3ryp by Molmil
Domain-domain flexibility leads to allostery within the camp receptor protein (CRP)
Descriptor: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Catabolite gene activator, GLYCEROL
Authors:Knapp, J, White, M.A, Lee, J.C.
Deposit date:2011-05-11
Release date:2012-05-02
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Domain-Domain Flexibility Leads to Allostery within the Cam Receptor Protein (Crp)
To be Published
3RYR
DownloadVisualize
BU of 3ryr by Molmil
Domain-domain flexibility leads to allostery within the camp receptor protein (CRP)
Descriptor: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Catabolite gene activator
Authors:Knapp, J, White, M.A, Lee, J.C.
Deposit date:2011-05-11
Release date:2012-05-02
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Domain-Domain Flexibility Leads to Allostery within the Cam Receptor Protein (Crp)
To be Published
4ZKK
DownloadVisualize
BU of 4zkk by Molmil
The novel double-fold structure of d(GCATGCATGC)
Descriptor: COBALT (II) ION, DNA (5'-D(*GP*CP*AP*TP*GP*CP*AP*TP*GP*C)-3')
Authors:Thirugnanasambandam, A, Karthik, S, Mandal, P.K, Gautham, N.
Deposit date:2015-04-30
Release date:2015-10-14
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.801 Å)
Cite:The novel double-folded structure of d(GCATGCATGC): a possible model for triplet-repeat sequences
Acta Crystallogr.,Sect.D, 71, 2015
2JXG
DownloadVisualize
BU of 2jxg by Molmil
Solution Structure of the DNA Binding domain of Proline Utilization A (PutA)
Descriptor: Proline dehydrogenase
Authors:Halouska, S, Zhou, Y, Becker, D, Powers, R.
Deposit date:2007-11-19
Release date:2008-02-19
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the Pseudomonas putida protein PpPutA45 and its DNA complex
Proteins, 75, 2008
2JXH
DownloadVisualize
BU of 2jxh by Molmil
Solution Structure of DNA binding domain of Proline Utilization A (PutA) for Psuedomonas putida
Descriptor: Proline dehydrogenase
Authors:Halouska, S, Zhou, Y, Becker, D, Powers, R.
Deposit date:2007-11-19
Release date:2008-10-21
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the Pseudomonas putida protein PpPutA45 and its DNA complex
Proteins, 75, 2008
2WC2
DownloadVisualize
BU of 2wc2 by Molmil
Nmr structure of catabolite activator protein in the unliganded state
Descriptor: CATABOLITE GENE ACTIVATOR
Authors:Popovych, N, Tzeng, S.R, Kalodimos, C.G.
Deposit date:2009-03-06
Release date:2009-04-21
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural Basis for Camp-Mediated Allosteric Control of the Catabolite Activator Protein.
Proc.Natl.Acad.Sci.USA, 106, 2009
3FL6
DownloadVisualize
BU of 3fl6 by Molmil
Influence of the incorporation of a cyclohexenyl nucleic acid (CeNA) residue onto the sequence d(GCGTGCG)/d(CGCACGC)
Descriptor: 5'-D(*CP*GP*CP*AP*CP*GP*C)-3', 5'-D(*GP*CP*GP*(XTR)P*GP*CP*G)-3', COBALT HEXAMMINE(III)
Authors:Robeyns, K, Herdewijn, P, Van Meervelt, L.
Deposit date:2008-12-18
Release date:2009-12-29
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.17 Å)
Cite:Direct observation of two cyclohexenyl (CeNA) ring conformations in duplex DNA.
Artif DNA PNA XNA, 1, 2010
7DFY
DownloadVisualize
BU of 7dfy by Molmil
Novel motif for left-handed G-quadruplex formation
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2xMotif2, POTASSIUM ION, ...
Authors:Das, P, Winnerdy, F.R, Maity, A, Mechulam, Y, Phan, A.T.
Deposit date:2020-11-10
Release date:2021-09-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:A novel minimal motif for left-handed G-quadruplex formation.
Chem.Commun.(Camb.), 57, 2021
6PNK
DownloadVisualize
BU of 6pnk by Molmil
Crystal structure of the G-quadruplex formed by (GGGTT)3GGG in complex with N-methylmesoporphryin IX
Descriptor: DNA (5'-D(P*GP*GP*GP*TP*TP*GP*GP*GP*TP*TP*GP*GP*GP*TP*TP*GP*GP*G)-3'), FORMIC ACID, N-METHYLMESOPORPHYRIN, ...
Authors:Yatsunyk, L.A, Lin, L.Y.
Deposit date:2019-07-02
Release date:2020-07-08
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Biophysical and X-ray structural studies of the (GGGTT)3GGG G-quadruplex in complex with N-methyl mesoporphyrin IX.
Plos One, 15, 2020
1X95
DownloadVisualize
BU of 1x95 by Molmil
Solution structure of the DNA-hexamer ATGCAT complexed with DNA Bis-intercalating Anticancer Drug XR5944 (MLN944)
Descriptor: 1-METHYL-9-[12-(9-METHYLPHENAZIN-10-IUM-1-YL)-12-OXO-2,11-DIAZA-5,8-DIAZONIADODEC-1-ANOYL]PHENAZIN-10-IUM, 5'-D(*AP*TP*GP*CP*AP*T)-3'
Authors:Dai, J, Punchihewa, C, Mistry, P, Ooi, A.T, Yang, D.
Deposit date:2004-08-19
Release date:2004-09-28
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Novel DNA bis-intercalation by MLN944, a potent clinical bisphenazine anticancer drug.
J.Biol.Chem., 279, 2004
1VTT
DownloadVisualize
BU of 1vtt by Molmil
GT Wobble Base-Pairing in Z-DNA at 1.0 Angstrom Atomic Resolution: The Crystal Structure of d(CGCGTG)
Descriptor: DNA (5'-D(*CP*GP*CP*GP*TP*G)-3')
Authors:Ho, P.S, Frederick, C.A, Quigley, G.J, Van Der Marel, G.A, Van Boom, J.H, Wang, A.H.-J, Rich, A.
Deposit date:1988-08-18
Release date:2011-07-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1 Å)
Cite:GT Wobble Base-Pairing in Z-DNA at 1.0 Angstrom Atomic Resolution: The Crystal Structure of d(CGCGTG)
Embo J., 4, 1985
1NGT
DownloadVisualize
BU of 1ngt by Molmil
The Role of Minor Groove Functional Groups in DNA Hydration
Descriptor: 5'-D(*CP*GP*CP*GP*AP*AP*(MTR)P*TP*CP*GP*CP*G)-3', MAGNESIUM ION
Authors:Woods, K.K, Lan, T, McLaughlin, L.W, Williams, L.D.
Deposit date:2002-12-17
Release date:2003-03-04
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:The Role of Minor Groove Functional Groups in DNA Hydration
Nucleic Acids Res., 31, 2003
2GZW
DownloadVisualize
BU of 2gzw by Molmil
Crystal structure of the E.coli CRP-cAMP complex
Descriptor: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Catabolite gene activator
Authors:Kumarevel, T.S, Tanaka, T, Shinkai, A, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-05-12
Release date:2007-05-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Crystal structure of activated CRP protein from E coli
To be Published
5ITT
DownloadVisualize
BU of 5itt by Molmil
Crystal Structure of Human NEIL1 bound to duplex DNA containing THF
Descriptor: DNA (26-MER), Endonuclease 8-like 1, GLYCEROL
Authors:Zhu, C, Lu, L, Zhang, J, Yue, Z, Song, J, Zong, S, Liu, M, Stovicek, O, Gao, Y, Yi, C.
Deposit date:2016-03-17
Release date:2016-07-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.53 Å)
Cite:Tautomerization-dependent recognition and excision of oxidation damage in base-excision DNA repair
Proc.Natl.Acad.Sci.USA, 113, 2016
5ITR
DownloadVisualize
BU of 5itr by Molmil
Crystal Structure of Human NEIL1(P2G) bound to duplex DNA containing THF
Descriptor: DNA (26-MER), Endonuclease 8-like 1
Authors:Zhu, C, Lu, L, Zhang, J, Yue, Z, Song, J, Zong, S, Liu, M, Stovicek, O, Gao, Y, Yi, C.
Deposit date:2016-03-17
Release date:2016-07-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Tautomerization-dependent recognition and excision of oxidation damage in base-excision DNA repair
Proc.Natl.Acad.Sci.USA, 113, 2016
3Q61
DownloadVisualize
BU of 3q61 by Molmil
3'-Fluoro Hexitol Nucleic Acid DNA Structure
Descriptor: DNA (5'-D(*GP*CP*GP*TP*AP*(F3H)P*AP*CP*GP*C)-3')
Authors:Seth, P.R, Allerson, C.R, Prakash, T.P, Siwkowski, A, Berdeja, A, Yu, J, Pallan, P.S, Watt, A.T, Gaus, H, Bhat, B, Egli, M, Swayze, E.E.
Deposit date:2010-12-30
Release date:2012-01-18
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Synthesis, improved antisense activity and structural rationale for the divergent RNA affinities of 3'-fluoro hexitol nucleic acid (FHNA and Ara-FHNA) modified oligonucleotides.
J.Am.Chem.Soc., 133, 2011
1G6N
DownloadVisualize
BU of 1g6n by Molmil
2.1 ANGSTROM STRUCTURE OF CAP-CAMP
Descriptor: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, CATABOLITE GENE ACTIVATOR PROTEIN
Authors:Passner, J.M, Schultz, S.C, Steitz, T.A.
Deposit date:2000-11-07
Release date:2000-12-15
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Modeling the cAMP-induced allosteric transition using the crystal structure of CAP-cAMP at 2.1 A resolution.
J.Mol.Biol., 304, 2000
2V8V
DownloadVisualize
BU of 2v8v by Molmil
Crystal structure of mutant R322A of beta-alanine synthase from Saccharomyces kluyveri
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, BETA-ALANINE SYNTHASE, N-(AMINOCARBONYL)-BETA-ALANINE, ...
Authors:Lundgren, S, Andersen, B, Piskur, J, Dobritzsch, D.
Deposit date:2007-08-15
Release date:2007-10-02
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal Structures of Yeast -Alanine Synthase Complexes Reveal the Mode of Substrate Binding and Large Scale Domain Closure Movements.
J.Biol.Chem., 282, 2007
2V8D
DownloadVisualize
BU of 2v8d by Molmil
Crystal structure of mutant E159A of beta-alanine synthase from Saccharomyces kluyveri
Descriptor: BETA-ALANINE SYNTHASE, ZINC ION
Authors:Lundgren, S, Andersen, B, Piskur, J, Dobritzsch, D.
Deposit date:2007-08-07
Release date:2007-10-02
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structures of Yeast -Alanine Synthase Complexes Reveal the Mode of Substrate Binding and Large Scale Domain Closure Movements.
J.Biol.Chem., 282, 2007
2V8G
DownloadVisualize
BU of 2v8g by Molmil
Crystal structure of beta-alanine synthase from Saccharomyces kluyveri in complex with the product beta-alanine
Descriptor: BETA-ALANINE, BETA-ALANINE SYNTHASE, BICINE, ...
Authors:Lundgren, S, Andersen, B, Piskur, J, Dobritzsch, D.
Deposit date:2007-08-07
Release date:2007-10-02
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structures of Yeast -Alanine Synthase Complexes Reveal the Mode of Substrate Binding and Large Scale Domain Closure Movements.
J.Biol.Chem., 282, 2007

225681

数据于2024-10-02公开中

PDB statisticsPDBj update infoContact PDBjnumon