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1D40	BASE SPECIFIC BINDING OF COPPER(II) TO Z-DNA: THE 1.3-ANGSTROMS SINGLE CRYSTAL STRUCTURE OF D(M5CGUAM5CG) IN THE PRESENCE OF CUCL2 Descriptor: COPPER (II) CHLORIDE, COPPER (II) ION, DNA (5'-D(*(5CM)P*(CU)GP*UP*AP*(5CM)P*(CU)G)-3') Authors: Geierstanger, B.H, Kagawa, T.F, Chen, S.-L, Quigley, G.J, Ho, P.S. Deposit date: 1991-05-07 Release date: 1992-04-15 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (1.3 Å) Cite: Base-specific binding of copper(II) to Z-DNA. The 1.3-A single crystal structure of d(m5CGUAm5CG) in the presence of CuCl2. J.Biol.Chem., 266, 1991
1D86	STRUCTURAL CONSEQUENCES OF A CARCINOGENIC ALKYLATION LESION ON DNA: EFFECT OF O6-ETHYL-GUANINE ON THE MOLECULAR STRUCTURE OF D(CGC[E6G]AATTCGCG)-NETROPSIN COMPLEX Descriptor: DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'), NETROPSIN Authors: Sriram, M, Van Der Marel, G.A, Roelen, H.L.P.F, Van Boom, J.H, Wang, A.H.-J. Deposit date: 1992-08-24 Release date: 1993-07-15 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Structural consequences of a carcinogenic alkylation lesion on DNA: effect of O6-ethylguanine on the molecular structure of the d(CGC[e6G]AATTCGCG)-netropsin complex. Biochemistry, 31, 1992
176D	NMR SOLUTION STRUCTURE OF A PEPTIDE NUCLEIC ACID COMPLEXED WITH RNA Descriptor: DNA (5'-D(*GPN*APN*APN*CPN*TPN*CPN)-3'), RNA (5'-R(P*GP*AP*GP*UP*UP*C)-3') Authors: Brown, S.C, Veal, J.M. Deposit date: 1994-05-17 Release date: 1994-11-01 Last modified: 2023-11-15 Method: SOLUTION NMR Cite: NMR solution structure of a peptide nucleic acid complexed with RNA. Science, 265, 1994
1EDR	MOLECULAR AND CRYSTAL STRUCTURE OF D(CGCGMO6AATTCGCG) AT 1.6 ANGSTROM Descriptor: 5'-D(*CP*GP*CP*GP*(A47)AP*AP*TP*TP*CP*GP*CP*G)-3', MAGNESIUM ION, SPERMINE Authors: Chatake, T, Hikima, T, Ono, A, Ueno, Y, Matsuda, A, Takenaka, A. Deposit date: 2000-01-28 Release date: 2000-02-16 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Crystallographic studies on damaged DNAs. II. N(6)-methoxyadenine can present two alternate faces for Watson-Crick base-pairing, leading to pyrimidine transition mutagenesis. J.Mol.Biol., 294, 1999
1BDN	CRYSTAL LATTICE PACKING IS IMPORTANT IN DETERMINING THE BEND OF A DNA DODECAMER CONTAINING AN ADENINE TRACT Descriptor: DNA (5'-D(*CP*GP*CP*AP*AP*AP*AP*AP*TP*GP*CP*G)-3'), DNA (5'-D(*CP*GP*CP*AP*TP*TP*TP*TP*TP*GP*CP*G)-3'), MAGNESIUM ION Authors: DiGabriele, A.D, Sanderson, M.R, Steitz, T.A. Deposit date: 1989-07-25 Release date: 1991-04-15 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (2.6 Å) Cite: Crystal lattice packing is important in determining the bend of a DNA dodecamer containing an adenine tract. Proc.Natl.Acad.Sci.USA, 86, 1989
3HIF	The crystal structure of apo wild type CAP at 3.6 A resolution. Descriptor: Catabolite gene activator Authors: Steitz, T.A, Sharma, H, Wang, J, Kong, J, Yu, S. Deposit date: 2009-05-19 Release date: 2009-09-08 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (3.59 Å) Cite: Structure of apo-CAP reveals that large conformational changes are necessary for DNA binding. Proc.Natl.Acad.Sci.USA, 106, 2009
6OD4	Human TCF4 C-terminal bHLH domain in Complex with 11-bp Oligonucleotide Containing E-box Sequence Descriptor: 1,2-ETHANEDIOL, DNA (5'-D(*TP*AP*CP*AP*CP*GP*TP*GP*TP*A)-3'), Transcription factor 4 Authors: Horton, J.R, Cheng, X, Yang, J. Deposit date: 2019-03-25 Release date: 2019-05-29 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (1.699 Å) Cite: Structural basis for preferential binding of human TCF4 to DNA containing 5-carboxylcytosine. Nucleic Acids Res., 47, 2019
6OD3	Human TCF4 C-terminal bHLH domain in Complex with 13-bp Oligonucleotide Containing E-box Sequence Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, DNA (5'-D(*CP*AP*TP*AP*CP*AP*CP*GP*TP*GP*TP*AP*T)-3'), ... Authors: Horton, J.R, Cheng, X, Yang, J. Deposit date: 2019-03-25 Release date: 2019-05-29 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (1.494 Å) Cite: Structural basis for preferential binding of human TCF4 to DNA containing 5-carboxylcytosine. Nucleic Acids Res., 47, 2019
3FWE	Crystal Structure of the Apo D138L CAP mutant Descriptor: Catabolite gene activator, PROLINE Authors: Sharma, H, Wang, J, Kong, J, Yu, S, Steitz, T. Deposit date: 2009-01-17 Release date: 2009-09-08 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Structure of apo-CAP reveals that large conformational changes are necessary for DNA binding Proc.Natl.Acad.Sci.USA, 106, 2009
3QOP	Domain-domain flexibility leads to allostery within the camp receptor protein (CRP) Descriptor: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Catabolite gene activator, GLYCEROL Authors: Knapp, J, White, M.A, Lee, J.C. Deposit date: 2011-02-10 Release date: 2012-04-04 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (1.96 Å) Cite: Domain-Domain Flexibility Leads to Allostery within the Camp Receptor Protein (Crp) To be Published
6N88	Cryo-EM structure of the Importin7:Importin beta:Histone H1.0 complex Descriptor: Histone H1.0, Importin subunit beta-1, MGC52556 protein Authors: Bilokapic, S, Ivic, N, Halic, M. Deposit date: 2018-11-28 Release date: 2019-02-27 Last modified: 2024-03-20 Method: ELECTRON MICROSCOPY (6.2 Å) Cite: Fuzzy Interactions Form and Shape the Histone Transport Complex. Mol. Cell, 73, 2019
3RYP	Domain-domain flexibility leads to allostery within the camp receptor protein (CRP) Descriptor: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Catabolite gene activator, GLYCEROL Authors: Knapp, J, White, M.A, Lee, J.C. Deposit date: 2011-05-11 Release date: 2012-05-02 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Domain-Domain Flexibility Leads to Allostery within the Cam Receptor Protein (Crp) To be Published
3RYR	Domain-domain flexibility leads to allostery within the camp receptor protein (CRP) Descriptor: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Catabolite gene activator Authors: Knapp, J, White, M.A, Lee, J.C. Deposit date: 2011-05-11 Release date: 2012-05-02 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2.7 Å) Cite: Domain-Domain Flexibility Leads to Allostery within the Cam Receptor Protein (Crp) To be Published
3ROU	Domain-domain flexibility leads to allostery within the camp receptor protein (CRP) Descriptor: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Catabolite gene activator Authors: Knapp, J, White, M.A, Lee, J.C. Deposit date: 2011-04-26 Release date: 2012-05-02 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Domain-Domain Flexibility Leads to Allostery within the Cam Receptor Protein (Crp) To be Published
3RPQ	Domain-domain flexibility leads to allostery within the camp receptor protein (CRP) Descriptor: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Catabolite gene activator, PHOSPHATE ION Authors: Knapp, J, White, M.A, Lee, J.C. Deposit date: 2011-04-27 Release date: 2012-05-02 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2.61 Å) Cite: Domain-Domain Flexibility Leads to Allostery within the Cam Receptor Protein (Crp) To be Published
3RDI	Domain-domain flexibility leads to allostery within the camp receptor protein (CRP) Descriptor: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Catabolite gene activator Authors: Knapp, J, White, M.A, Lee, J.C. Deposit date: 2011-04-01 Release date: 2012-05-02 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2.95 Å) Cite: Domain-Domain Flexibility Leads to Allostery within the Cam Receptor Protein (Crp) To be Published
8CMM	Re-pairing DNA - binding of a ruthenium phi complex to a double mismatch Descriptor: DNA (5'-D(*CP*GP*CP*TP*AP*TP*AP*AP*TP*GP*CP*G)-3'), LITHIUM ION, POTASSIUM ION, ... Authors: Prieto Otoya, T.D, Cardin, C.J, McQuaid, K.M. Deposit date: 2023-02-20 Release date: 2024-03-06 Last modified: 2024-07-03 Method: X-RAY DIFFRACTION (0.9 Å) Cite: Re-pairing DNA: binding of a ruthenium phi complex to a double mismatch. Chem Sci, 15, 2024
4ZKK	The novel double-fold structure of d(GCATGCATGC) Descriptor: COBALT (II) ION, DNA (5'-D(*GP*CP*AP*TP*GP*CP*AP*TP*GP*C)-3') Authors: Thirugnanasambandam, A, Karthik, S, Mandal, P.K, Gautham, N. Deposit date: 2015-04-30 Release date: 2015-10-14 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (1.801 Å) Cite: The novel double-folded structure of d(GCATGCATGC): a possible model for triplet-repeat sequences Acta Crystallogr.,Sect.D, 71, 2015
1VTT	GT Wobble Base-Pairing in Z-DNA at 1.0 Angstrom Atomic Resolution: The Crystal Structure of d(CGCGTG) Descriptor: DNA (5'-D(*CP*GP*CP*GP*TP*G)-3') Authors: Ho, P.S, Frederick, C.A, Quigley, G.J, Van Der Marel, G.A, Van Boom, J.H, Wang, A.H.-J, Rich, A. Deposit date: 1988-08-18 Release date: 2011-07-13 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (1 Å) Cite: GT Wobble Base-Pairing in Z-DNA at 1.0 Angstrom Atomic Resolution: The Crystal Structure of d(CGCGTG) Embo J., 4, 1985
2JXH	Solution Structure of DNA binding domain of Proline Utilization A (PutA) for Psuedomonas putida Descriptor: Proline dehydrogenase Authors: Halouska, S, Zhou, Y, Becker, D, Powers, R. Deposit date: 2007-11-19 Release date: 2008-10-21 Last modified: 2024-05-29 Method: SOLUTION NMR Cite: Solution structure of the Pseudomonas putida protein PpPutA45 and its DNA complex Proteins, 75, 2008
1X95	Solution structure of the DNA-hexamer ATGCAT complexed with DNA Bis-intercalating Anticancer Drug XR5944 (MLN944) Descriptor: 1-METHYL-9-[12-(9-METHYLPHENAZIN-10-IUM-1-YL)-12-OXO-2,11-DIAZA-5,8-DIAZONIADODEC-1-ANOYL]PHENAZIN-10-IUM, 5'-D(*AP*TP*GP*CP*AP*T)-3' Authors: Dai, J, Punchihewa, C, Mistry, P, Ooi, A.T, Yang, D. Deposit date: 2004-08-19 Release date: 2004-09-28 Last modified: 2024-05-01 Method: SOLUTION NMR Cite: Novel DNA bis-intercalation by MLN944, a potent clinical bisphenazine anticancer drug. J.Biol.Chem., 279, 2004
2JXG	Solution Structure of the DNA Binding domain of Proline Utilization A (PutA) Descriptor: Proline dehydrogenase Authors: Halouska, S, Zhou, Y, Becker, D, Powers, R. Deposit date: 2007-11-19 Release date: 2008-02-19 Last modified: 2024-05-29 Method: SOLUTION NMR Cite: Solution structure of the Pseudomonas putida protein PpPutA45 and its DNA complex Proteins, 75, 2008
3FL6	Influence of the incorporation of a cyclohexenyl nucleic acid (CeNA) residue onto the sequence d(GCGTGCG)/d(CGCACGC) Descriptor: 5'-D(*CP*GP*CP*AP*CP*GP*C)-3', 5'-D(*GP*CP*GP*(XTR)P*GP*CP*G)-3', COBALT HEXAMMINE(III) Authors: Robeyns, K, Herdewijn, P, Van Meervelt, L. Deposit date: 2008-12-18 Release date: 2009-12-29 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (1.17 Å) Cite: Direct observation of two cyclohexenyl (CeNA) ring conformations in duplex DNA. Artif DNA PNA XNA, 1, 2010
1JHI	Solution Structure of a Hedamycin-DNA complex Descriptor: 5'-D(*AP*CP*CP*(HEH)GP*GP*T)-3', HEDAMYCIN Authors: Owen, E.A, Burley, G.A, Carver, J.A, Wickham, G, Keniry, M.A. Deposit date: 2001-06-27 Release date: 2003-07-08 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: Structural investigation of the hedamycin:d(ACCGGT)2 complex by NMR and restrained molecular dynamics. Biochem.Biophys.Res.Commun., 290, 2002
1JUU	NMR Structure of a Parallel Stranded DNA Duplex at Atomic Resolution Descriptor: 5'-D(P*CP*CP*AP*TP*AP*AP*TP*TP*TP*AP*CP*C)-3', 5'-D(P*CP*CP*TP*AP*TP*TP*AP*AP*AP*TP*CP*C)-3' Authors: Parvathy, V.R, Bhaumik, S.R, Chary, K.V.R, Govil, G, Liu, K, Howard, F.B, Miles, H.T. Deposit date: 2001-08-28 Release date: 2002-04-03 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: NMR structure of a parallel-stranded DNA duplex at atomic resolution. Nucleic Acids Res., 30, 2002

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