PDB: 582 resultsInfo pagesStatus searchChemie searchBIRD

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4N3N	Crystal structure of eukaryotic translation initiation factor eIF5B (517-1116) from Chaetomium thermophilum, apo form Descriptor: Eukaryotic translation initiation factor 5B-like protein, eIF5B(517-C), LACTIC ACID Authors: Kuhle, B, Ficner, R. Deposit date: 2013-10-07 Release date: 2014-07-09 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2.752 Å) Cite: eIF5B employs a novel domain release mechanism to catalyze ribosomal subunit joining. Embo J., 33, 2014
4NBS	The structure of aIF2gamma subunit H20F from archaeon Sulfolobus solfataricus complexed with GDPCP Descriptor: FORMIC ACID, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER, ... Authors: Kravchenko, O.V, Nikonov, O.S, Arhipova, V.I, Stolboushkina, E.A, Gabdulkhakov, A.G, Nikulin, A.D, Garber, M.B, Nikonov, S.V. Deposit date: 2013-10-23 Release date: 2014-10-29 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.305 Å) Cite: The structure of aIF2gamma subunit H20F from archaeon Sulfolobus solfataricus complexed with GDPCP To be Published
4NCN	Crystal structure of eukaryotic translation initiation factor eIF5B (517-858) from Chaetomium thermophilum in complex with GTP Descriptor: ACETIC ACID, Eukaryotic translation initiation factor 5B-like protein, GLYCEROL, ... Authors: Kuhle, B, Ficner, R. Deposit date: 2013-10-24 Release date: 2014-07-09 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.87 Å) Cite: eIF5B employs a novel domain release mechanism to catalyze ribosomal subunit joining. Embo J., 33, 2014
4NCL	Crystal structure of eukaryotic translation initiation factor eIF5B (517-970) from Chaetomium thermophilum in complex with GDP Descriptor: Eukaryotic translation initiation factor 5B-like protein, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION Authors: Kuhle, B, Ficner, R. Deposit date: 2013-10-24 Release date: 2014-07-09 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.115 Å) Cite: eIF5B employs a novel domain release mechanism to catalyze ribosomal subunit joining. Embo J., 33, 2014
4NCF	Crystal structure of eukaryotic translation initiation factor eIF5B (399-852) from Saccharomyces cerevisiae in complex with GDP Descriptor: Eukaryotic translation initiation factor 5B, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION Authors: Kuhle, B, Ficner, R. Deposit date: 2013-10-24 Release date: 2014-07-09 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (3.015 Å) Cite: eIF5B employs a novel domain release mechanism to catalyze ribosomal subunit joining. Embo J., 33, 2014
4V7B	Visualization of two tRNAs trapped in transit during EF-G-mediated translocation Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... Authors: Ramrath, D.J.F, Lancaster, L, Sprink, T, Mielke, T, Loerke, J, Noller, H.F, Spahn, C.M.T. Deposit date: 2013-10-27 Release date: 2014-07-09 Last modified: 2019-12-18 Method: ELECTRON MICROSCOPY (6.8 Å) Cite: Visualization of two transfer RNAs trapped in transit during elongation factor G-mediated translocation. Proc.Natl.Acad.Sci.USA, 110, 2013
4V7D	Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA*EF-G structure) Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... Authors: Brilot, A.F, Korostelev, A.A, Ermolenko, D.N, Grigorieff, N. Deposit date: 2013-11-21 Release date: 2014-07-09 Last modified: 2019-12-18 Method: ELECTRON MICROSCOPY (7.6 Å) Cite: Structure of the ribosome with elongation factor G trapped in the pretranslocation state. Proc.Natl.Acad.Sci.USA, 110, 2013
3J5Y	Structure of the mammalian ribosomal pre-termination complex associated with eRF1-eRF3-GDPNP Descriptor: 5'-R(*AP*UP*UP*GP*UP*AP*AP*AP*AP*A)-3', Eukaryotic peptide chain release factor GTP-binding subunit ERF3A, Eukaryotic peptide chain release factor subunit 1, ... Authors: des Georges, A, Hashem, Y, Unbehaun, A, Grassucci, R.A, Taylor, D, Hellen, C.U.T, Pestova, T.V, Frank, J. Deposit date: 2013-11-21 Release date: 2013-12-25 Last modified: 2018-07-18 Method: ELECTRON MICROSCOPY (9.7 Å) Cite: Structure of the mammalian ribosomal pre-termination complex associated with eRF1*eRF3*GDPNP. Nucleic Acids Res., 42, 2014
4V90	Thermus thermophilus Ribosome Descriptor: 16S RIBOSOMAL RNA, 23S RIBOSOMAL RNA, 30S RIBOSOMAL PROTEIN S10, ... Authors: Chen, Y, Feng, S, Kumar, V, Ero, R, Gao, Y.G. Deposit date: 2014-02-22 Release date: 2014-07-09 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (2.95 Å) Cite: Structure of EF-G-ribosome complex in a pretranslocation state. Nat. Struct. Mol. Biol., 20, 2013
4CRN	Cryo-EM of a pretermination complex with eRF1 and eRF3 Descriptor: ERF1 IN RIBOSOME-BOUND ERF1-ERF3-GDPNP COMPLEX, ERF3 IN RIBOSOME BOUND ERF1-ERF3-GDPNP COMPLEX, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER Authors: Preis, A, Heuer, A, Barrio-Garcia, C, Hauser, A, Eyler, D, Berninghausen, O, Green, R, Becker, T, Beckmann, R. Deposit date: 2014-02-28 Release date: 2014-07-23 Last modified: 2024-05-08 Method: ELECTRON MICROSCOPY (9.1 Å) Cite: Cryoelectron Microscopic Structures of Eukaryotic Translation Termination Complexes Containing Erf1-Erf3 or Erf1-Abce1. Cell Rep., 8, 2014
4P3Y	Crystal structure of Acinetobacter baumannii DsbA in complex with EF-Tu Descriptor: Elongation factor Tu 1, GLYCEROL, GUANOSINE-5'-DIPHOSPHATE, ... Authors: Premkumar, L, Martin, J.L. Deposit date: 2014-03-10 Release date: 2014-06-18 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (2.154 Å) Cite: Structure of the Acinetobacter baumannii Dithiol Oxidase DsbA Bound to Elongation Factor EF-Tu Reveals a Novel Protein Interaction Site. J.Biol.Chem., 289, 2014
4CXH	Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement Descriptor: 18S RRNA - H44, 18S RRNA - H5-H14, 18S RRNA - H8, ... Authors: Budkevich, T.V, Giesebrecht, J, Behrmann, E, Loerke, J, Ramrath, D.J.F, Mielke, T, Ismer, J, Hildebrand, P, Tung, C.-S, Nierhaus, K.H, Sanbonmatsu, K.Y, Spahn, C.M.T. Deposit date: 2014-04-07 Release date: 2014-07-16 Last modified: 2019-06-26 Method: ELECTRON MICROSCOPY (8.9 Å) Cite: Regulation of the Mammalian Elongation Cycle by Subunit Rolling: A Eukaryotic-Specific Ribosome Rearrangement. Cell(Cambridge,Mass.), 158, 2014
4CXG	Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement Descriptor: 18S RRNA - H44, 18S RRNA - H5-H14, 18S RRNA - H8, ... Authors: Budkevich, T.V, Giesebrecht, J, Behrmann, E, Loerke, J, Ramrath, D.J.F, Mielke, T, Ismer, J, Hildebrand, P, Tung, C.-S, Nierhaus, K.H, Sanbonmatsu, K.Y, Spahn, C.M.T. Deposit date: 2014-04-07 Release date: 2014-07-16 Last modified: 2024-05-08 Method: ELECTRON MICROSCOPY (8.7 Å) Cite: Regulation of the Mammalian Elongation Cycle by Subunit Rolling: A Eukaryotic-Specific Ribosome Rearrangement. Cell(Cambridge,Mass.), 158, 2014
4PC3	Elongation factor Tu:Ts complex with partially bound GDP Descriptor: Elongation factor Ts, Elongation factor Tu 1, GLYCEROL, ... Authors: Thirup, S.S. Deposit date: 2014-04-14 Release date: 2015-05-06 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (1.8313 Å) Cite: Structural outline of the detailed mechanism for elongation factor Ts-mediated guanine nucleotide exchange on elongation factor Tu. J.Struct.Biol., 191, 2015
4PC7	Elongation factor Tu:Ts complex in a near GTP conformation. Descriptor: (1S,2S,3E,5E,7E,10S,11S,12S)-12-[(2R,4E,6E,8Z,10R,12E,14E,16Z,18S,19Z)-10,18-DIHYDROXY-12,16,19-TRIMETHYL-11,22-DIOXOOX ACYCLODOCOSA-4,6,8,12,14,16,19-HEPTAEN-2-YL]-2,11-DIHYDROXY-1,10-DIMETHYL-9-OXOTRIDECA-3,5,7-TRIEN-1-YL 6-DEOXY-2,4-DI-O-METHYL-BETA-L-GALACTOPYRANOSIDE, Elongation factor Ts, Elongation factor Tu 1, ... Authors: Thirup, S.S. Deposit date: 2014-04-14 Release date: 2015-05-06 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (3.6003 Å) Cite: Structural outline of the detailed mechanism for elongation factor Ts-mediated guanine nucleotide exchange on elongation factor Tu. J.Struct.Biol., 191, 2015
4PC1	Elongation Factor Tu:Ts complex with a bound phosphate Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Elongation factor Ts, Elongation factor Tu, ... Authors: Thirup, S.S. Deposit date: 2014-04-14 Release date: 2015-05-06 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (1.95 Å) Cite: Structural outline of the detailed mechanism for elongation factor Ts-mediated guanine nucleotide exchange on elongation factor Tu. J.Struct.Biol., 191, 2015
4PC6	Elongation factor Tu:Ts complex with bound GDPNP Descriptor: Elongation factor Ts, Elongation factor Tu, GLYCEROL, ... Authors: Thirup, S.S. Deposit date: 2014-04-14 Release date: 2015-05-06 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Structural outline of the detailed mechanism for elongation factor Ts-mediated guanine nucleotide exchange on elongation factor Tu. J.Struct.Biol., 191, 2015
4PC2	Elongation factor Tu:Ts complex with a bound GDP Descriptor: CHLORIDE ION, Elongation factor Ts, Elongation factor Tu, ... Authors: Thirup, S.S. Deposit date: 2014-04-14 Release date: 2015-05-06 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (2.1999 Å) Cite: Structural outline of the detailed mechanism for elongation factor Ts-mediated guanine nucleotide exchange on elongation factor Tu. J.Struct.Biol., 191, 2015
4Q7J	Complex structure of viral RNA polymerase Descriptor: 30S ribosomal protein S1, Elongation factor Ts, Elongation factor Tu 1, ... Authors: Takeshita, D. Deposit date: 2014-04-25 Release date: 2014-08-27 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (2.9 Å) Cite: Molecular insights into replication initiation by Q beta replicase using ribosomal protein S1. Nucleic Acids Res., 42, 2014
4QFM	The structure of aIF2gamma subunit D152A from archaeon Sulfolobus solfataricus complexed with GDPCP Descriptor: FORMIC ACID, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER, ... Authors: Kravchenko, O.V, Nikonov, O.S, Arhipova, V.I, Stolboushkina, E.A, Gabdulkhakov, A.G, Nikulin, A.D, Garber, M.B, Nikonov, S.V. Deposit date: 2014-05-21 Release date: 2015-06-03 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.3 Å) Cite: The structure of aIF2gamma subunit D152A from archaeon Sulfolobus solfataricus complexed with GDPCP To be Published
4QHY	The structure of aIF2gamma subunit H20F/D152A from archaeon Sulfolobus solfataricus complexed with GDPCP Descriptor: MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER, Translation initiation factor 2 subunit gamma Authors: Kravchenko, O.V, Nikonov, O.S, Arhipova, V.I, Stolboushkina, E.A, Gabdulkhakov, A.G, Nikulin, A.D, Garber, M.B, Nikonov, S.V. Deposit date: 2014-05-30 Release date: 2015-06-03 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (3.29 Å) Cite: Binding mRNA on the archaeal translation initiation factor 2 gamma-subunit To be Published
4TMZ	Translation initiation factor eIF5B (517-858) from C. thermophilum, bound to GTPgammaS and potassium Descriptor: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, CHLORIDE ION, GLYCEROL, ... Authors: Kuhle, B, Ficner, R. Deposit date: 2014-06-02 Release date: 2014-09-24 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (2.28 Å) Cite: A monovalent cation acts as structural and catalytic cofactor in translational GTPases. Embo J., 33, 2014
4TN1	Translation initiation factor eIF5B (517-858) mutant D533R from C. thermophilum, bound to GTPgammaS Descriptor: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, MAGNESIUM ION, eIF5B Authors: Kuhle, B, Ficner, R. Deposit date: 2014-06-02 Release date: 2014-09-24 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (2.75 Å) Cite: A monovalent cation acts as structural and catalytic cofactor in translational GTPases. Embo J., 33, 2014
4TMW	Translation initiation factor eIF5B (517-858) from C. thermophilum, bound to GTP and Sodium Descriptor: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, SODIUM ION, ... Authors: Kuhle, B, Ficner, R. Deposit date: 2014-06-02 Release date: 2014-09-24 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (1.55 Å) Cite: A monovalent cation acts as structural and catalytic cofactor in translational GTPases. Embo J., 33, 2014
4TMV	Translation initiation factor eIF5B (517-858) from C. thermophilum, bound to GTPgammaS and Sodium Descriptor: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, GLYCEROL, MAGNESIUM ION, ... Authors: Kuhle, B, Ficner, R. Deposit date: 2014-06-02 Release date: 2014-09-24 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (1.53 Å) Cite: A monovalent cation acts as structural and catalytic cofactor in translational GTPases. Embo J., 33, 2014

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