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3MDG
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BU of 3mdg by Molmil
Crystal Structure of the 25kDa Subunit of Human Cleavage factor Im in complex with RNA UUGUAU
Descriptor: Cleavage and polyadenylation specificity factor subunit 5, GLYCEROL, RNA (5'-R(*UP*UP*GP*UP*AP*U)-3')
Authors:Yang, Q, Gilmartin, G.M, Doublie, S.
Deposit date:2010-03-30
Release date:2010-06-02
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Structural basis of UGUA recognition by the Nudix protein CFI(m)25 and implications for a regulatory role in mRNA 3' processing.
Proc.Natl.Acad.Sci.USA, 107, 2010
3VGL
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BU of 3vgl by Molmil
Crystal structure of a ROK family glucokinase from Streptomyces griseus in complex with glucose and AMPPNP
Descriptor: Glucokinase, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, SODIUM ION, ...
Authors:Miyazono, K, Tabei, N, Morita, S, Ohnishi, Y, Horinouchi, S, Tanokura, M.
Deposit date:2011-08-15
Release date:2011-12-07
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Substrate recognition mechanism and substrate-dependent conformational changes of an ROK family glucokinase from Streptomyces griseus
J.Bacteriol., 194, 2012
5AWE
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BU of 5awe by Molmil
Crystal structure of a hypothetical protein, TTHA0829 from Thermus thermophilus HB8, composed of cystathionine-beta-synthase (CBS) and aspartate-kinase chorismate-mutase tyrA (ACT) domains
Descriptor: Putative acetoin utilization protein, acetoin dehydrogenase
Authors:Nakabayashi, M, Shibata, N, Kanagawa, M, Nakagawa, N, Kuramitsu, S, Higuchi, Y.
Deposit date:2015-07-03
Release date:2016-05-18
Last modified:2020-02-26
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Crystal structure of a hypothetical protein, TTHA0829 from Thermus thermophilus HB8, composed of cystathionine-beta-synthase (CBS) and aspartate-kinase chorismate-mutase tyrA (ACT) domains.
Extremophiles, 20, 2016
1NYJ
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BU of 1nyj by Molmil
The closed state structure of M2 protein H+ channel by solid state NMR spectroscopy
Descriptor: Matrix protein M2
Authors:Nishimura, K, Kim, S, Zhang, L, Cross, T.A.
Deposit date:2003-02-12
Release date:2003-03-25
Last modified:2024-05-22
Method:SOLID-STATE NMR
Cite:The closed state of a H+ channel helical bundle combining precise orientational and distance restraints from solid state NMR
Biochemistry, 41, 2002
1OHK
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BU of 1ohk by Molmil
HUMAN DIHYDROFOLATE REDUCTASE, ORTHORHOMBIC (P21 21 21) CRYSTAL FORM
Descriptor: DIHYDROFOLATE REDUCTASE, N-(4-CARBOXY-4-{4-[(2,4-DIAMINO-PTERIDIN-6-YLMETHYL)-AMINO]-BENZOYLAMINO}-BUTYL)-PHTHALAMIC ACID, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Cody, V, Galitsky, N, Luft, J.R, Pangborn, W.
Deposit date:1997-09-17
Release date:1998-05-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Comparison of two independent crystal structures of human dihydrofolate reductase ternary complexes reduced with nicotinamide adenine dinucleotide phosphate and the very tight-binding inhibitor PT523.
Biochemistry, 36, 1997
5IRU
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BU of 5iru by Molmil
Crystal structure of avidin in complex with 1-biotinylpyrene
Descriptor: 1-biotinylpyrene, 2-acetamido-2-deoxy-beta-D-glucopyranose, Avidin
Authors:Strzelczyk, P, Bujacz, G.
Deposit date:2016-03-14
Release date:2016-10-12
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Characterization of the Avidin Interactions with Fluorescent Pyrene-Conjugates: 1-Biotinylpyrene and 1-Desthiobiotinylpyrene.
Molecules, 21, 2016
2M5U
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BU of 2m5u by Molmil
NMR structure of the P4 hairpin of the CPEB3 ribozyme
Descriptor: RNA_(5'-R(*GP*GP*CP*AP*GP*AP*UP*UP*CP*UP*GP*GP*UP*GP*AP*AP*UP*CP*UP*GP*CP*C)-3')
Authors:Skilandat, M, Rowinska-Zyrek, M, Sigel, R.K.O.
Deposit date:2013-03-08
Release date:2014-04-02
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution structure and metal ion binding sites of the human CPEB3 ribozyme's P4 domain.
J.Biol.Inorg.Chem., 19, 2014
3NZP
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BU of 3nzp by Molmil
Crystal Structure of the Biosynthetic Arginine decarboxylase SpeA from Campylobacter jejuni, Northeast Structural Genomics Consortium Target BR53
Descriptor: Arginine decarboxylase, PYRIDOXAL-5'-PHOSPHATE, SULFATE ION
Authors:Forouhar, F, Lew, S, Seetharaman, J, Sahdev, S, Xiao, R, Ciccosanti, C, Belote, R.L, Everett, J.K, Nair, R, Acton, T.B, Rost, B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
Deposit date:2010-07-16
Release date:2010-09-01
Last modified:2012-02-22
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structures of bacterial biosynthetic arginine decarboxylases.
Acta Crystallogr.,Sect.F, 66, 2010
5B4T
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BU of 5b4t by Molmil
Crystal structure of D-3-hydroxybutyrate dehydrogenase from Alcaligenes faecalis complexed with NAD+ and a substrate D-3-hydroxybutyrate
Descriptor: (3R)-3-hydroxybutanoic acid, 3-hydroxybutyrate dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Kanazawa, H, Tsunoda, M, Hoque, M.M, Suzuki, K, Yamamoto, T, Takenaka, A.
Deposit date:2016-04-19
Release date:2016-08-17
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.19 Å)
Cite:Structural insights into the catalytic reaction trigger and inhibition of D-3-hydroxybutyrate dehydrogenase
Acta Crystallogr.,Sect.F, 72, 2016
6J7U
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BU of 6j7u by Molmil
Crystal structure of blue fluorescent protein from metagenomic library in complex with NADPH
Descriptor: Blue fluorescent protein, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Seo, P.W, Kim, J.S.
Deposit date:2019-01-18
Release date:2019-09-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.302 Å)
Cite:Structure-Guided Generation of a Redox-Independent Blue Fluorescent Protein from mBFP.
J.Mol.Biol., 431, 2019
5B4U
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BU of 5b4u by Molmil
Crystal structure of D-3-hydroxybutyrate dehydrogenase from Alcaligenes faecalis complexed with NAD+ and an inhibitor malonate
Descriptor: 3-hydroxybutyrate dehydrogenase, CHLORIDE ION, MALONIC ACID, ...
Authors:Kanazawa, H, Tsunoda, M, Hoque, M.M, Suzuki, K, Yamamoto, T, Takenaka, A.
Deposit date:2016-04-19
Release date:2016-08-17
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structural insights into the catalytic reaction trigger and inhibition of D-3-hydroxybutyrate dehydrogenase
Acta Crystallogr.,Sect.F, 72, 2016
5BSZ
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BU of 5bsz by Molmil
X-ray structure of the sugar N-methyltransferase KedS8 from Streptoalloteichus sp ATCC 53650
Descriptor: 1,2-ETHANEDIOL, N-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE, ...
Authors:Thoden, J.B, Delvaux, N.A, Holden, H.M.
Deposit date:2015-06-02
Release date:2015-07-29
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Molecular architecture of KedS8, a sugar N-methyltransferase from Streptoalloteichus sp. ATCC 53650.
Protein Sci., 24, 2015
5BUA
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BU of 5bua by Molmil
Lysine 120-acetylated P53 DNA binding domain in a complex with DNA.
Descriptor: Cellular tumor antigen p53, DNA (5'-D(P*GP*GP*AP*CP*AP*TP*GP*TP*CP*C)-3'), ZINC ION
Authors:Arbely, E, Vainer, R.
Deposit date:2015-06-03
Release date:2016-07-06
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.812 Å)
Cite:Structural Basis for p53 Lys120-Acetylation-Dependent DNA-Binding Mode.
J.Mol.Biol., 428, 2016
3NSE
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BU of 3nse by Molmil
BOVINE ENOS, H4B-FREE, SEITU COMPLEX
Descriptor: ACETATE ION, ARGININE, CACODYLATE ION, ...
Authors:Raman, C.S, Li, H, Martasek, P, Kral, V, Masters, B.S.S, Poulos, T.L.
Deposit date:1998-09-23
Release date:1999-05-18
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of constitutive endothelial nitric oxide synthase: a paradigm for pterin function involving a novel metal center.
Cell(Cambridge,Mass.), 95, 1998
2ZOY
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BU of 2zoy by Molmil
The multi-drug binding transcriptional repressor CgmR (CGL2612 protein) from C.glutamicum
Descriptor: GLYCEROL, Transcriptional regulator
Authors:Itou, H, Yao, M, Watanabe, N, Tanaka, I.
Deposit date:2008-06-20
Release date:2008-07-08
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The CGL2612 protein from Corynebacterium glutamicum is a drug resistance-related transcriptional repressor: structural and functional analysis of a newly identified transcription factor from genomic DNA analysis
J.Biol.Chem., 280, 2005
3O48
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BU of 3o48 by Molmil
Crystal structure of fission protein Fis1 from Saccharomyces cerevisiae
Descriptor: Mitochondria fission 1 protein
Authors:Tooley, J.E, Khangulov, V, Heroux, A, Bosch, J, Hill, R.B.
Deposit date:2010-07-26
Release date:2011-08-10
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:The 1.75 Angstrom resolution structure of fission protein Fis1 from Saccharomyces cerevisiae reveals elusive interactions of the autoinhibitory domain
Acta Crystallogr.,Sect.F, 67, 2011
3O83
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BU of 3o83 by Molmil
Structure of BasE N-terminal domain from Acinetobacter baumannii bound to 2-(4-n-dodecyl-1,2,3-triazol-1-yl)-5'-O-[N-(2-hydroxybenzoyl)sulfamoyl]adenosine
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, 2-(4-dodecyl-1H-1,2,3-triazol-1-yl)-5'-O-{[(2-hydroxyphenyl)carbonyl]sulfamoyl}adenosine, ...
Authors:Drake, E.J, Duckworth, B.P, Neres, J, Aldrich, C.C, Gulick, A.M.
Deposit date:2010-08-02
Release date:2010-10-06
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Biochemical and structural characterization of bisubstrate inhibitors of BasE, the self-standing nonribosomal peptide synthetase adenylate-forming enzyme of acinetobactin synthesis.
Biochemistry, 49, 2010
5J6F
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BU of 5j6f by Molmil
Crystal structure of DAH7PS-CM complex from Geobacillus sp. with prephenate
Descriptor: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase, chorismate mutase-isozyme 3, MANGANESE (II) ION, ...
Authors:Nazmi, A.R, Othman, M, Lang, E.J.M, Bai, Y, Allison, T.M, Panjkar, S, Arcus, V.L, Parker, E.J.
Deposit date:2016-04-04
Release date:2016-09-07
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Interdomain Conformational Changes Provide Allosteric Regulation en Route to Chorismate.
J. Biol. Chem., 291, 2016
1WOS
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BU of 1wos by Molmil
Crystal Structure of T-protein of the Glycine Cleavage System
Descriptor: Aminomethyltransferase
Authors:Lee, H.H, Kim, D.J, Ahn, H.J, Ha, J.Y, Suh, S.W.
Deposit date:2004-08-24
Release date:2004-09-07
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Crystal Structure of T-protein of the Glycine Cleavage System: Cofactor binding, insights into H-protein recognition, and molecular basis for understanding nonketotic hyperglycinemia
J.Biol.Chem., 279, 2004
3O84
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BU of 3o84 by Molmil
Structure of BasE N-terminal domain from Acinetobacter baumannii bound to 6-phenyl-1-(pyridin-4-ylmethyl)-1H-pyrazolo[3,4-b]pyridine-4-carboxylic acid.
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, 6-phenyl-1-(pyridin-4-ylmethyl)-1H-pyrazolo[3,4-b]pyridine-4-carboxylic acid, ...
Authors:Drake, E.J, Duckworth, B.P, Neres, J, Aldrich, C.C, Gulick, A.M.
Deposit date:2010-08-02
Release date:2010-10-06
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Biochemical and structural characterization of bisubstrate inhibitors of BasE, the self-standing nonribosomal peptide synthetase adenylate-forming enzyme of acinetobactin synthesis.
Biochemistry, 49, 2010
3O82
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BU of 3o82 by Molmil
Structure of BasE N-terminal domain from Acinetobacter baumannii bound to 5'-O-[N-(2,3-dihydroxybenzoyl)sulfamoyl] adenosine
Descriptor: 5'-O-{[(2,3-dihydroxyphenyl)carbonyl]sulfamoyl}adenosine, CALCIUM ION, Peptide arylation enzyme
Authors:Drake, E.J, Duckworth, B.P, Neres, J, Aldrich, C.C, Gulick, A.M.
Deposit date:2010-08-02
Release date:2010-10-06
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Biochemical and structural characterization of bisubstrate inhibitors of BasE, the self-standing nonribosomal peptide synthetase adenylate-forming enzyme of acinetobactin synthesis.
Biochemistry, 49, 2010
6V38
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BU of 6v38 by Molmil
Cryo-EM structure of Ca2+-bound hsSlo1 channel
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, CALCIUM ION, CHOLESTEROL, ...
Authors:Tao, X, MacKinnon, R.
Deposit date:2019-11-25
Release date:2019-12-25
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Molecular structures of the human Slo1 K + channel in complex with beta 4.
Elife, 8, 2019
6JKU
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BU of 6jku by Molmil
Crystal structure of N-acetylglucosamine-6-phosphate deacetylase from Pasteurella Multocida
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, N-acetylglucosamine-6-phosphate deacetylase, ...
Authors:Manjunath, L, Bose, S, Subramanian, R.
Deposit date:2019-03-01
Release date:2020-03-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Quaternary variations in the structural assembly of N-acetylglucosamine-6-phosphate deacetylase from Pasteurella multocida.
Proteins, 2020
5O4V
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BU of 5o4v by Molmil
P.vivax NMT with aminomethylindazole and quinoline inhibitors bound
Descriptor: 1-[5-(4-fluoranyl-2-methyl-phenyl)-1~{H}-indazol-3-yl]-~{N},~{N}-dimethyl-methanamine, 2-oxopentadecyl-CoA, CHLORIDE ION, ...
Authors:Brannigan, J.A, Wilkinson, A.J.
Deposit date:2017-05-31
Release date:2018-05-16
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Fragment-derived inhibitors of human N-myristoyltransferase block capsid assembly and replication of the common cold virus.
Nat Chem, 10, 2018
5JYF
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BU of 5jyf by Molmil
Structures of Streptococcus agalactiae GBS GAPDH in different enzymatic states
Descriptor: Glyceraldehyde-3-phosphate dehydrogenase
Authors:Schormann, N, Chattopadhyay, D.
Deposit date:2016-05-13
Release date:2016-12-21
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.62 Å)
Cite:Crystal Structures of Group B Streptococcus Glyceraldehyde-3-Phosphate Dehydrogenase: Apo-Form, Binary and Ternary Complexes.
PLoS ONE, 11, 2016

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