PDB: 72308 resultsInfo pagesStatus searchChemie searchBIRD

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5LZV	Structure of the mammalian ribosomal termination complex with accommodated eRF1(AAQ) and ABCE1. Descriptor: 18S ribosomal RNA, 28S ribosomal RNA, 5.8S ribosomal RNA, ... Authors: Shao, S, Murray, J, Brown, A, Taunton, J, Ramakrishnan, V, Hegde, R.S. Deposit date: 2016-10-02 Release date: 2016-11-30 Last modified: 2024-05-15 Method: ELECTRON MICROSCOPY (3.35 Å) Cite: Decoding Mammalian Ribosome-mRNA States by Translational GTPase Complexes. Cell, 167, 2016
5LZX	Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a UGA stop codon. Descriptor: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S12, ... Authors: Shao, S, Murray, J, Brown, A, Taunton, J, Ramakrishnan, V, Hegde, R.S. Deposit date: 2016-10-02 Release date: 2016-11-30 Last modified: 2024-05-15 Method: ELECTRON MICROSCOPY (3.67 Å) Cite: Decoding Mammalian Ribosome-mRNA States by Translational GTPase Complexes. Cell, 167, 2016
5MGP	Structural basis for ArfA-RF2 mediated translation termination on stop-codon lacking mRNAs Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... Authors: Huter, P, Mueller, C, Beckert, B, Arenz, S, Berninghausen, O, Beckmann, R, Wilson, N.D. Deposit date: 2016-11-21 Release date: 2016-12-14 Last modified: 2017-08-30 Method: ELECTRON MICROSCOPY (3.1 Å) Cite: Structural basis for ArfA-RF2-mediated translation termination on mRNAs lacking stop codons. Nature, 541, 2017
8JDK	Structure of the Human cytoplasmic Ribosome with human tRNA Asp(ManQ34) and mRNA(GAU) Descriptor: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S10, ... Authors: Ishiguro, K, Yokoyama, T, Shirouzu, M, Suzuki, T. Deposit date: 2023-05-14 Release date: 2023-12-06 Last modified: 2023-12-27 Method: ELECTRON MICROSCOPY (2.26 Å) Cite: Glycosylated queuosines in tRNAs optimize translational rate and post-embryonic growth. Cell, 186, 2023
8JDM	Structure of the Human cytoplasmic Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU) (rotated state) Descriptor: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S10, ... Authors: Ishiguro, K, Yokoyama, T, Shirouzu, M, Suzuki, T. Deposit date: 2023-05-14 Release date: 2023-12-06 Last modified: 2023-12-27 Method: ELECTRON MICROSCOPY (2.67 Å) Cite: Glycosylated queuosines in tRNAs optimize translational rate and post-embryonic growth. Cell, 186, 2023
8JDL	Structure of the Human cytoplasmic Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU) (non-rotated state) Descriptor: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S10, ... Authors: Ishiguro, K, Yokoyama, T, Shirouzu, M, Suzuki, T. Deposit date: 2023-05-14 Release date: 2023-12-06 Last modified: 2023-12-27 Method: ELECTRON MICROSCOPY (2.42 Å) Cite: Glycosylated queuosines in tRNAs optimize translational rate and post-embryonic growth. Cell, 186, 2023
8JDJ	Structure of the Human cytoplasmic Ribosome with human tRNA Asp(Q34) and mRNA(GAU) Descriptor: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S10, ... Authors: Ishiguro, K, Yokoyama, T, Shirouzu, M, Suzuki, T. Deposit date: 2023-05-14 Release date: 2023-12-06 Last modified: 2023-12-27 Method: ELECTRON MICROSCOPY (2.5 Å) Cite: Glycosylated queuosines in tRNAs optimize translational rate and post-embryonic growth. Cell, 186, 2023
6GQV	Cryo-EM recosntruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GMPPCP) Descriptor: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ... Authors: Pellegrino, S, Yusupov, M, Yusupova, G, Hashem, Y. Deposit date: 2018-06-08 Release date: 2018-07-11 Last modified: 2018-08-08 Method: ELECTRON MICROSCOPY (4 Å) Cite: Structural Insights into the Role of Diphthamide on Elongation Factor 2 in mRNA Reading-Frame Maintenance. J. Mol. Biol., 430, 2018
6P5J	Structure of a mammalian 80S ribosome in complex with the Israeli Acute Paralysis Virus IRES (Class 2) Descriptor: 18S rRNA, 28S rRNA, 5.8S rRNA, ... Authors: Acosta-Reyes, F.J, Neupane, R, Frank, J, Fernandez, I.S. Deposit date: 2019-05-30 Release date: 2019-09-18 Last modified: 2024-03-20 Method: ELECTRON MICROSCOPY (3.1 Å) Cite: The Israeli acute paralysis virus IRES captures host ribosomes by mimicking a ribosomal state with hybrid tRNAs. Embo J., 38, 2019
6P5I	Structure of a mammalian 80S ribosome in complex with the Israeli Acute Paralysis Virus IRES (Class 1) Descriptor: 18S rRNA, 28S rRNA, 5.8S rRNA, ... Authors: Acosta-Reyes, F.J, Neupane, R, Frank, J, Fernandez, I.S. Deposit date: 2019-05-30 Release date: 2019-09-18 Last modified: 2020-02-26 Method: ELECTRON MICROSCOPY (3.1 Å) Cite: The Israeli acute paralysis virus IRES captures host ribosomes by mimicking a ribosomal state with hybrid tRNAs. Embo J., 38, 2019
6H4N	Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli Ribosome Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S1, ... Authors: Beckert, B, Turk, M, Czech, A, Berninghausen, O, Beckmann, R, Ignatova, Z, Plitzko, J, Wilson, N.D. Deposit date: 2018-07-22 Release date: 2018-09-05 Last modified: 2018-10-24 Method: ELECTRON MICROSCOPY (3 Å) Cite: Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1. Nat Microbiol, 3, 2018
6GQ1	Cryo-EM reconstruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GMPPCP/sordarin) Descriptor: 18S ribosomal RNA, 40S ribosomal protein S0-A, 40S ribosomal protein S1-A, ... Authors: Pellegrino, S, Demeshkina, N, Mancera-Martinez, E, Melnikov, S, Simonetti, A, Myasnikov, A, Yusupov, M, Yusupova, G, Hashem, Y. Deposit date: 2018-06-07 Release date: 2018-07-11 Last modified: 2018-08-08 Method: ELECTRON MICROSCOPY (4.4 Å) Cite: Structural Insights into the Role of Diphthamide on Elongation Factor 2 in mRNA Reading-Frame Maintenance. J. Mol. Biol., 430, 2018
6GQB	Cryo-EM reconstruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GDP+AlF4/sordarin) Descriptor: 18S ribosomal RNA, 40S ribosomal protein S0-A, 40S ribosomal protein S1-A, ... Authors: Pellegrino, S, Yusupov, M, Yusupova, G, Hashem, Y. Deposit date: 2018-06-07 Release date: 2018-07-11 Last modified: 2021-08-04 Method: ELECTRON MICROSCOPY (3.9 Å) Cite: Structural Insights into the Role of Diphthamide on Elongation Factor 2 in mRNA Reading-Frame Maintenance. J. Mol. Biol., 430, 2018
8G7Q	Structure of the Escherichia coli 70S ribosome in complex with EF-Tu and Ile-tRNAIle(LAU) bound to the near-cognate AUG codon (Structure II) Descriptor: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ... Authors: Rybak, M.Y, Gagnon, M.G. Deposit date: 2023-02-16 Release date: 2024-03-06 Last modified: 2024-05-29 Method: ELECTRON MICROSCOPY (3.1 Å) Cite: Structures of the ribosome bound to EF-Tu-isoleucine tRNA elucidate the mechanism of AUG avoidance. Nat.Struct.Mol.Biol., 31, 2024
8G7P	Structure of the Escherichia coli 70S ribosome in complex with EF-Tu and Ile-tRNAIle(LAU) bound to the cognate AUA codon (Structure I) Descriptor: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ... Authors: Rybak, M.Y, Gagnon, M.G. Deposit date: 2023-02-16 Release date: 2024-03-06 Last modified: 2024-05-29 Method: ELECTRON MICROSCOPY (2.9 Å) Cite: Structures of the ribosome bound to EF-Tu-isoleucine tRNA elucidate the mechanism of AUG avoidance. Nat.Struct.Mol.Biol., 31, 2024
6P5N	Structure of a mammalian 80S ribosome in complex with a single translocated Israeli Acute Paralysis Virus IRES and eRF1 Descriptor: 18S rRNA, 28S rRNA, 5.8S rRNA, ... Authors: Acosta-Reyes, F.J, Neupane, R, Frank, J, Fernandez, I.S. Deposit date: 2019-05-30 Release date: 2019-09-25 Last modified: 2020-01-08 Method: ELECTRON MICROSCOPY (3.2 Å) Cite: The Israeli acute paralysis virus IRES captures host ribosomes by mimicking a ribosomal state with hybrid tRNAs. Embo J., 38, 2019
8BHL	Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and Am6AA mRNA codon in the A-site after uncompleted di-peptide formation Descriptor: 16S rRNA RRSB-RRNA, 23S rRNA RRLG-RRNA, 30S ribosomal protein S10, ... Authors: Koziej, L, Glatt, S. Deposit date: 2022-10-31 Release date: 2023-08-16 Method: ELECTRON MICROSCOPY (2.21 Å) Cite: Modulation of translational decoding by m 6 A modification of mRNA. Nat Commun, 14, 2023
8BGE	Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and AAm6A mRNA codon in the A-site after uncompleted di-peptide formation Descriptor: 16S rRNA RRSB-RRNA, 23S rRNA RRLG-RRNA, 30S ribosomal protein S10, ... Authors: Koziej, L, Glatt, S. Deposit date: 2022-10-27 Release date: 2023-08-16 Method: ELECTRON MICROSCOPY (2.11 Å) Cite: Modulation of translational decoding by m 6 A modification of mRNA. Nat Commun, 14, 2023
8BHP	Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and m6AAA mRNA codon in the A-site after uncompleted di-peptide formation Descriptor: 16S rRNA RRSB-RRNA, 23S rRNA RRLG-RRNA, 30S ribosomal protein S10, ... Authors: Koziej, L, Glatt, S. Deposit date: 2022-10-31 Release date: 2023-08-16 Method: ELECTRON MICROSCOPY (2.37 Å) Cite: Modulation of translational decoding by m 6 A modification of mRNA. Nat Commun, 14, 2023
8BGH	Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and AAA mRNA codon in the A-site after uncompleted di-peptide formation Descriptor: 16S rRNA RRSB-RRNA, 23S rRNA RRLG-RRNA, 30S ribosomal protein S10, ... Authors: Koziej, L, Glatt, S. Deposit date: 2022-10-27 Release date: 2023-08-16 Method: ELECTRON MICROSCOPY (2.88 Å) Cite: Modulation of translational decoding by m 6 A modification of mRNA. Nat Commun, 14, 2023
6P5K	Structure of a mammalian 80S ribosome in complex with the Israeli Acute Paralysis Virus IRES (Class 3) Descriptor: 18S rRNA, 28S rRNA, 5.8S rRNA, ... Authors: Acosta-Reyes, F.J, Neupane, R, Frank, J, Fernandez, I.S. Deposit date: 2019-05-30 Release date: 2019-09-18 Last modified: 2020-01-08 Method: ELECTRON MICROSCOPY (3.1 Å) Cite: The Israeli acute paralysis virus IRES captures host ribosomes by mimicking a ribosomal state with hybrid tRNAs. Embo J., 38, 2019
8BIM	Initiation complex of the E. coli 70S ribosome with mRNA containing AAm6A codon in the A-site Descriptor: 16S rRNA RRSB-RRNA, 23S rRNA RRLG-RRNA, 30S ribosomal protein S10, ... Authors: Koziej, L, Glatt, S. Deposit date: 2022-11-02 Release date: 2023-08-16 Method: ELECTRON MICROSCOPY (2.04 Å) Cite: Modulation of translational decoding by m 6 A modification of mRNA. Nat Commun, 14, 2023
8BIL	Initiation complex of the E. coli 70S ribosome with mRNA containing AAA codon in the A-site. Descriptor: 16S rRNA RRSB-RRNA, 23S rRNA RRLG-RRNA, 30S ribosomal protein S10, ... Authors: Koziej, L, Glatt, S. Deposit date: 2022-11-02 Release date: 2023-08-16 Method: ELECTRON MICROSCOPY (2.04 Å) Cite: Modulation of translational decoding by m 6 A modification of mRNA. Nat Commun, 14, 2023
7PJY	Structure of the 70S-EF-G-GDP ribosome complex with tRNAs in chimeric state 1 (CHI1-EF-G-GDP) Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... Authors: Petrychenko, V, Peng, B.Z, Schwarzer, A.C, Peske, F, Rodnina, M.V, Fischer, N. Deposit date: 2021-08-24 Release date: 2021-10-20 Last modified: 2024-04-24 Method: ELECTRON MICROSCOPY (3.1 Å) Cite: Structural mechanism of GTPase-powered ribosome-tRNA movement. Nat Commun, 12, 2021
7PJV	Structure of the 70S-EF-G-GDP-Pi ribosome complex with tRNAs in hybrid state 1 (H1-EF-G-GDP-Pi) Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... Authors: Petrychenko, V, Peng, B.Z, Schwarzer, A.C, Peske, F, Rodnina, M.V, Fischer, N. Deposit date: 2021-08-24 Release date: 2021-10-20 Last modified: 2024-04-24 Method: ELECTRON MICROSCOPY (3.1 Å) Cite: Structural mechanism of GTPase-powered ribosome-tRNA movement. Nat Commun, 12, 2021

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