Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6X3F
DownloadVisualize
BU of 6x3f by Molmil
hEAAT3-IFS-Apo
Descriptor: CHOLINE ION, Excitatory amino acid transporter 3
Authors:Qiu, B, Matthies, D, Boudker, O.
Deposit date:2020-05-21
Release date:2021-03-17
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.03 Å)
Cite:Cryo-EM structures of excitatory amino acid transporter 3 visualize coupled substrate, sodium, and proton binding and transport.
Sci Adv, 7, 2021
8BX7
DownloadVisualize
BU of 8bx7 by Molmil
Structure of the rod CNG channel bound to calmodulin
Descriptor: Cyclic nucleotide-gated cation channel beta-1, cGMP-gated cation channel alpha-1, calmodulin-1
Authors:Marino, J.
Deposit date:2022-12-08
Release date:2023-04-12
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (2.76 Å)
Cite:Structural basis of calmodulin modulation of the rod cyclic nucleotide-gated channel.
Proc.Natl.Acad.Sci.USA, 120, 2023
6WKT
DownloadVisualize
BU of 6wkt by Molmil
Cu(I)-bound Copper Storage Protein BsCsp3
Descriptor: Csp3
Authors:Chen, J.Z, Oken, A, Dennison, C, Lee, J, David, S.
Deposit date:2020-04-16
Release date:2021-04-21
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Cu(I)-bound Copper Storage Protein BsCsp3
To Be Published
3U58
DownloadVisualize
BU of 3u58 by Molmil
Crystal Structure of the Tetrahymena telomerase processivity factor Teb1 AB
Descriptor: DNA (5'-D(*GP*GP*GP*T)-3'), Tetrahymena Teb1 AB
Authors:Zeng, Z, Huang, J, Yang, Y, Lei, M.
Deposit date:2011-10-11
Release date:2011-12-28
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.613 Å)
Cite:Structural basis for Tetrahymena telomerase processivity factor Teb1 binding to single-stranded telomeric-repeat DNA.
Proc.Natl.Acad.Sci.USA, 108, 2011
8GC3
DownloadVisualize
BU of 8gc3 by Molmil
Domote-bound GluK2 kainate receptors in partially-open conformation 2
Descriptor: (2S,3S,4S)-2-CARBOXY-4-[(1Z,3E,5R)-5-CARBOXY-1-METHYL-1,3-HEXADIENYL]-3-PYRROLIDINEACETIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Bogdanovic, N, Tajima, N.
Deposit date:2023-03-01
Release date:2024-03-13
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structural basis for kainate receptor activation by a partial agonist
To Be Published
8BSC
DownloadVisualize
BU of 8bsc by Molmil
CryoEM structure of the RAD51 nucleoprotein filament in the presence of ADP and Ca2+
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CALCIUM ION, DNA repair protein RAD51 homolog 1
Authors:Appleby, R, Bollschweiler, D, Pellegrini, L.
Deposit date:2022-11-24
Release date:2023-05-03
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:A metal ion-dependent mechanism of RAD51 nucleoprotein filament disassembly.
Iscience, 26, 2023
8GC5
DownloadVisualize
BU of 8gc5 by Molmil
Domoate-bound GluK2 kainate receptors in non-active conformation
Descriptor: (2S,3S,4S)-2-CARBOXY-4-[(1Z,3E,5R)-5-CARBOXY-1-METHYL-1,3-HEXADIENYL]-3-PYRROLIDINEACETIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Bogdanovic, N, Tajima, N.
Deposit date:2023-03-01
Release date:2024-03-13
Method:ELECTRON MICROSCOPY (3.93 Å)
Cite:Structural basis for kainate receptor activation by a partial agonist
To Be Published
8BQ2
DownloadVisualize
BU of 8bq2 by Molmil
CryoEM structure of the pre-synaptic RAD51 nucleoprotein filament in the presence of ATP and Ca2+
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, DNA (30-MER), ...
Authors:Appleby, R, Bollschweiler, D, Pellegrini, L.
Deposit date:2022-11-18
Release date:2023-05-03
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:A metal ion-dependent mechanism of RAD51 nucleoprotein filament disassembly.
Iscience, 26, 2023
8GC2
DownloadVisualize
BU of 8gc2 by Molmil
Domoate-bound GluK2 kainate receptor in partially-open conformation 1
Descriptor: (2S,3S,4S)-2-CARBOXY-4-[(1Z,3E,5R)-5-CARBOXY-1-METHYL-1,3-HEXADIENYL]-3-PYRROLIDINEACETIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Bogdanovic, N, Tajima, N.
Deposit date:2023-03-01
Release date:2024-03-13
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Structural basis for kainate receptor activation by a partial agonist
To Be Published
8GC4
DownloadVisualize
BU of 8gc4 by Molmil
Domoate-bound GluK2 kainate receptor in partially-open conformation 3
Descriptor: (2S,3S,4S)-2-CARBOXY-4-[(1Z,3E,5R)-5-CARBOXY-1-METHYL-1,3-HEXADIENYL]-3-PYRROLIDINEACETIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Bogdanovic, N, Tajima, N.
Deposit date:2023-03-01
Release date:2024-03-13
Method:ELECTRON MICROSCOPY (3.93 Å)
Cite:Structural basis for kainate receptor activation by a partial agonist
To Be Published
7QZO
DownloadVisualize
BU of 7qzo by Molmil
Crystal structure of GacS D1 domain
Descriptor: CADMIUM ION, GLYCEROL, Histidine kinase
Authors:Fadel, F, Bassim, V, Botzanowski, T, Francis, V.I, Legrand, P, Porter, S.L, Bourne, Y, Cianferani, S, Vincent, F.
Deposit date:2022-01-31
Release date:2022-07-06
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Insights into the atypical autokinase activity of the Pseudomonas aeruginosa GacS histidine kinase and its interaction with RetS.
Structure, 30, 2022
5LHU
DownloadVisualize
BU of 5lhu by Molmil
ATP Phosphoribosyltransferase from Mycobacterium tuberculosis in complex with the allosteric inhibitor L-Histidine
Descriptor: ATP phosphoribosyltransferase, GLYCEROL, HISTIDINE, ...
Authors:de Chiara, C, Pisco, J.P, de Carvalho, L.P, Smerdon, S.J, Walker, P.A, Ogrodowicz, R.
Deposit date:2016-07-12
Release date:2017-06-21
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Uncoupling conformational states from activity in an allosteric enzyme.
Nat Commun, 8, 2017
7QZ2
DownloadVisualize
BU of 7qz2 by Molmil
Crystal structure of GacS D1 domain in complex with BeF3-
Descriptor: BERYLLIUM TRIFLUORIDE ION, CADMIUM ION, Histidine kinase, ...
Authors:Fadel, F, Bassim, V, Botzanowski, T, Francis, V.I, Legrand, P, Porter, S.L, Bourne, Y, Cianferani, S, Vincent, F.
Deposit date:2022-01-30
Release date:2022-07-06
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Insights into the atypical autokinase activity of the Pseudomonas aeruginosa GacS histidine kinase and its interaction with RetS.
Structure, 30, 2022
5LRC
DownloadVisualize
BU of 5lrc by Molmil
Crystal structure of Glycogen Phosphorylase in complex with KS114
Descriptor: (1S)-1,5-anhydro-1-(5-phenyl-4H-1,2,4-triazol-3-yl)-D-glucitol, Glycogen phosphorylase, muscle form, ...
Authors:Kantsadi, A.L, Stravodimos, G.A, Chatzileontiadou, D.S.M, Leonidas, D.D.
Deposit date:2016-08-18
Release date:2017-06-14
Last modified:2020-08-05
Method:X-RAY DIFFRACTION (2 Å)
Cite:van der Waals interactions govern C-beta-d-glucopyranosyl triazoles' nM inhibitory potency in human liver glycogen phosphorylase.
J. Struct. Biol., 199, 2017
8BMS
DownloadVisualize
BU of 8bms by Molmil
Cryo-EM structure of the mutant solitary ECF module 2EQ in MSP2N2 lipid nanodiscs in the ATPase closed and ATP-bound conformation
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Energy-coupling factor transporter ATP-binding protein EcfA1, Energy-coupling factor transporter ATP-binding protein EcfA2, ...
Authors:Thangaratnarajah, C, Rheinberger, J, Paulino, C, Slotboom, D.J.
Deposit date:2022-11-10
Release date:2023-08-02
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Expulsion mechanism of the substrate-translocating subunit in ECF transporters.
Nat Commun, 14, 2023
8BMP
DownloadVisualize
BU of 8bmp by Molmil
Cryo-EM structure of the folate-specific ECF transporter complex in MSP2N2 lipid nanodiscs bound to ATP and ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Energy-coupling factor transporter ATP-binding protein EcfA1, ...
Authors:Thangaratnarajah, C, Rheinberger, J, Paulino, C, Slotboom, D.J.
Deposit date:2022-11-10
Release date:2023-08-02
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Expulsion mechanism of the substrate-translocating subunit in ECF transporters.
Nat Commun, 14, 2023
3UF1
DownloadVisualize
BU of 3uf1 by Molmil
Crystal Structure of Vimentin (fragment 144-251) from Homo sapiens, Northeast Structural Genomics Consortium Target HR4796B
Descriptor: Vimentin
Authors:Kuzin, A, Abashidze, M, Vorobiev, S.M, Patel, P, Xiao, R, Ciccosanti, C, Shastry, R, Everett, J.K, Nair, R, Acton, T.B, Rost, B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2011-10-31
Release date:2011-11-30
Last modified:2013-04-24
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:The structure of vimentin linker 1 and rod 1B domains characterized by site-directed spin-labeling electron paramagnetic resonance (SDSL-EPR) and X-ray crystallography.
J.Biol.Chem., 287, 2012
6XGR
DownloadVisualize
BU of 6xgr by Molmil
YSD1 major tail protein
Descriptor: YSD1_22 major tail protein
Authors:Hardy, J.M, Dunstan, R, Venugopal, H, Lithgow, T.J, Coulibaly, F.J.
Deposit date:2020-06-17
Release date:2020-07-01
Last modified:2023-11-29
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:The architecture and stabilisation of flagellotropic tailed bacteriophages.
Nat Commun, 11, 2020
8BJF
DownloadVisualize
BU of 8bjf by Molmil
Cryo-EM structure of nanodisc-reconstituted wildtype human MRP4 (inward-facing conformation)
Descriptor: ATP-binding cassette sub-family C member 4, CHOLESTEROL, CHOLESTEROL HEMISUCCINATE
Authors:Raj, I, Bloch, M, Pape, T.H, Taylor, N.M.I.
Deposit date:2022-11-04
Release date:2023-08-30
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural and mechanistic basis of substrate transport by the multidrug transporter MRP4.
Structure, 31, 2023
8BWQ
DownloadVisualize
BU of 8bwq by Molmil
Cryo-EM structure of nanodisc-reconstituted wildtype human MRP4 (in complex with topotecan)
Descriptor: (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE, ATP-binding cassette sub-family C member 4
Authors:Raj, I, Bloch, M, Pape, T.H, Taylor, N.M.I.
Deposit date:2022-12-07
Release date:2023-08-30
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structural and mechanistic basis of substrate transport by the multidrug transporter MRP4.
Structure, 31, 2023
8BWP
DownloadVisualize
BU of 8bwp by Molmil
Cryo-EM structure of nanodisc-reconstituted wildtype human MRP4 (in complex with methotrexate)
Descriptor: ATP-binding cassette sub-family C member 4, METHOTREXATE
Authors:Raj, I, Bloch, M, Pape, T.H, Taylor, N.M.I.
Deposit date:2022-12-07
Release date:2023-08-30
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structural and mechanistic basis of substrate transport by the multidrug transporter MRP4.
Structure, 31, 2023
8BWO
DownloadVisualize
BU of 8bwo by Molmil
Cryo-EM structure of nanodisc-reconstituted human MRP4 with E1202Q mutation (outward-facing occluded conformation)
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, ATP-binding cassette sub-family C member 4, MAGNESIUM ION
Authors:Raj, I, Bloch, M, Pape, T.H, Taylor, N.M.I.
Deposit date:2022-12-07
Release date:2023-08-30
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural and mechanistic basis of substrate transport by the multidrug transporter MRP4.
Structure, 31, 2023
8BWR
DownloadVisualize
BU of 8bwr by Molmil
Cryo-EM structure of nanodisc-reconstituted wildtype human MRP4 (in complex with prostaglandin E2)
Descriptor: (Z)-7-[(1R,2R,3R)-3-hydroxy-2-[(E,3S)-3-hydroxyoct-1-enyl]-5-oxo-cyclopentyl]hept-5-enoic acid, ATP-binding cassette sub-family C member 4
Authors:Raj, I, Bloch, M, Pape, T.H, Taylor, N.M.I.
Deposit date:2022-12-07
Release date:2023-08-30
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structural and mechanistic basis of substrate transport by the multidrug transporter MRP4.
Structure, 31, 2023
8BGW
DownloadVisualize
BU of 8bgw by Molmil
CryoEM structure of quinol-dependent Nitric Oxide Reductase (qNOR) from Alcaligenes xylosoxidans at 2.2 A resolution
Descriptor: (1R)-2-{[(R)-(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(DODECANOYLOXY)METHYL]ETHYL (9Z)-OCTADEC-9-ENOATE, CALCIUM ION, FE (III) ION, ...
Authors:Flynn, A, Antonyuk, S.V, Eady, R.R, Muench, S.P, Hasnain, S.S.
Deposit date:2022-10-28
Release date:2023-08-16
Method:ELECTRON MICROSCOPY (2.2 Å)
Cite:A 2.2 angstrom cryoEM structure of a quinol-dependent NO Reductase shows close similarity to respiratory oxidases.
Nat Commun, 14, 2023
6XBM
DownloadVisualize
BU of 6xbm by Molmil
Structure of human SMO-Gi complex with 24(S),25-EC
Descriptor: 17-[3-(3,3-DIMETHYL-OXIRANYL)-1-METHYL-PROPYL]-10,13-DIMETHYL-2,3,4,7,8,9,10,11,12,13,14,15,16,17-TETRADECAHYDRO-1H-CYC LOPENTA[A]PHENANTHREN-3-OL, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Qi, X, Long, T, Li, X.
Deposit date:2020-06-06
Release date:2020-09-30
Last modified:2020-11-25
Method:ELECTRON MICROSCOPY (3.15 Å)
Cite:Sterols in an intramolecular channel of Smoothened mediate Hedgehog signaling.
Nat.Chem.Biol., 16, 2020

224572

건을2024-09-04부터공개중

PDB statisticsPDBj update infoContact PDBjnumon