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6U51
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BU of 6u51 by Molmil
Anti-Sudan ebolavirus Nucleoprotein Single Domain Antibody Sudan B (SB) Complexed with Sudan ebolavirus Nucleoprotein C-terminal Domain 610-738
Descriptor: Anti-Sudan ebolavirus Nucleoprotein Single Domain Antibody Sudan B (SB), Nucleoprotein
Authors:Taylor, A.B, Sherwood, L.J, Hart, P.J, Hayhurst, A.
Deposit date:2019-08-26
Release date:2019-11-06
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.52 Å)
Cite:Paratope Duality and Gullying are Among the Atypical Recognition Mechanisms Used by a Trio of Nanobodies to Differentiate Ebolavirus Nucleoproteins.
J.Mol.Biol., 431, 2019
4WJ5
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BU of 4wj5 by Molmil
Structure of HLA-A2 in complex with an altered peptide ligands based on Mart-1 variant epitope
Descriptor: Beta-2-microglobulin, GLYCEROL, HLA class I histocompatibility antigen, ...
Authors:Celie, P.H.N, Rodenko, B, Ovaa, H.
Deposit date:2014-09-29
Release date:2014-10-29
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Altered Peptide Ligands Revisited: Vaccine Design through Chemically Modified HLA-A2-Restricted T Cell Epitopes.
J Immunol., 193, 2014
4WGF
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BU of 4wgf by Molmil
YcaC from Pseudomonas aeruginosa with hexane-2,5-diol and covalent acrylamide
Descriptor: (2R,5R)-hexane-2,5-diol, CHLORIDE ION, PROPIONAMIDE, ...
Authors:Groftehauge, M.K, Truan, D, Vasil, A, Denny, P.W, Vasil, M.L, Pohl, E.
Deposit date:2014-09-18
Release date:2015-07-29
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.34020686 Å)
Cite:Crystal Structure of a Hidden Protein, YcaC, a Putative Cysteine Hydrolase from Pseudomonas aeruginosa, with and without an Acrylamide Adduct.
Int J Mol Sci, 16, 2015
3NRZ
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BU of 3nrz by Molmil
Crystal Structure of Bovine Xanthine Oxidase in Complex with Hypoxanthine
Descriptor: DIOXOTHIOMOLYBDENUM(VI) ION, FE2/S2 (INORGANIC) CLUSTER, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Cao, H, Pauff, J.M, Hille, R.
Deposit date:2010-07-01
Release date:2010-07-14
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Substrate orientation and catalytic specificity in the action of xanthine oxidase: the sequential hydroxylation of hypoxanthine to uric acid.
J.Biol.Chem., 285, 2010
3NVV
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BU of 3nvv by Molmil
Crystal Structure of Bovine Xanthine Oxidase in Complex with Arsenite
Descriptor: ARSENITE, DIOXOTHIOMOLYBDENUM(VI) ION, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Cao, H, Hille, R.
Deposit date:2010-07-08
Release date:2011-01-19
Last modified:2012-05-09
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:X-ray Crystal Structure of Arsenite-Inhibited Xanthine Oxidase: Mu-Sulfido,Mu-Oxo Double Bridge between Molybdenum and Arsenic in the Active Site.
J.Am.Chem.Soc., 133, 2011
8JCH
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BU of 8jch by Molmil
Cryo-EM structure of yeast Rat1-bound Pol II pre-termination transcription complex 1 (Pol II Rat1-PTTC1)
Descriptor: 5'-3' exoribonuclease 2, DNA (38-MER), DNA-directed RNA polymerase II subunit RPB1, ...
Authors:Zeng, Y, Zhang, Y.
Deposit date:2023-05-11
Release date:2024-01-31
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Structural basis of exoribonuclease-mediated mRNA transcription termination.
Nature, 628, 2024
7QI2
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BU of 7qi2 by Molmil
Magic-angle spinning NMR structure of the human voltage-dependent anion channel 1 (E73V/C127A/C232S) in DMPC lipid bilayers
Descriptor: Voltage-dependent anion-selective channel protein 1
Authors:Najbauer, E.E, Andreas, L.B.
Deposit date:2021-12-14
Release date:2022-03-16
Last modified:2024-06-19
Method:SOLID-STATE NMR
Cite:Structure and Gating Behavior of the Human Integral Membrane Protein VDAC1 in a Lipid Bilayer.
J.Am.Chem.Soc., 144, 2022
8IPB
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BU of 8ipb by Molmil
Wheat 80S ribosome pausing on AUG-Stop with cycloheximide
Descriptor: 18S ribosomal RNA, 4-{(2R)-2-[(1S,3S,5S)-3,5-dimethyl-2-oxocyclohexyl]-2-hydroxyethyl}piperidine-2,6-dione, 40S ribosomal protein eL8, ...
Authors:Yokoyama, T, Tanaka, M, Saito, H, Nishimoto, M, Tsuda, K, Sotta, N, Shigematsu, H, Shirouzu, M, Iwasaki, S, Ito, T, Fujiwara, T.
Deposit date:2023-03-14
Release date:2024-02-21
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Boric acid intercepts 80S ribosome migration from AUG-stop by stabilizing eRF1.
Nat.Chem.Biol., 20, 2024
7OHU
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BU of 7ohu by Molmil
Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL2 expression shut down, population B
Descriptor: 25S rRNA, 5.8S rRNA, 60S ribosomal protein L13-A, ...
Authors:Milkereit, P, Poell, G.
Deposit date:2021-05-11
Release date:2021-11-03
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Analysis of subunit folding contribution of three yeast large ribosomal subunit proteins required for stabilisation and processing of intermediate nuclear rRNA precursors.
Plos One, 16, 2021
7OF1
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BU of 7of1 by Molmil
Nog1-TAP associated immature ribosomal particle population A from S. cerevisiae
Descriptor: 25S rRNA, 5.8S rRNA, 5S rRNA, ...
Authors:Milkereit, P, Poell, G.
Deposit date:2021-05-04
Release date:2021-11-03
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Analysis of subunit folding contribution of three yeast large ribosomal subunit proteins required for stabilisation and processing of intermediate nuclear rRNA precursors.
Plos One, 16, 2021
7OHY
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BU of 7ohy by Molmil
Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL34 expression shut down, population B
Descriptor: 25S rRNA, 5.8S rRNA, 60S ribosomal protein L13-A, ...
Authors:Milkereit, P, Poell, G.
Deposit date:2021-05-11
Release date:2021-11-03
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Analysis of subunit folding contribution of three yeast large ribosomal subunit proteins required for stabilisation and processing of intermediate nuclear rRNA precursors.
Plos One, 16, 2021
3P5J
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BU of 3p5j by Molmil
The structure of the human RNase H2 complex defines key interaction interfaces relevant to enzyme function and human disease
Descriptor: Ribonuclease H2 subunit A, Ribonuclease H2 subunit B, Ribonuclease H2 subunit C
Authors:Bubeck, D, Graham, S.C, Jones, E.Y.
Deposit date:2010-10-08
Release date:2010-11-17
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The Structure of the Human RNase H2 Complex Defines Key Interaction Interfaces Relevant to Enzyme Function and Human Disease.
J.Biol.Chem., 286, 2011
8K5P
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BU of 8k5p by Molmil
Cryo-EM structure of yeast Rat1-bound Pol II pre-termination transcription complex 2 (Pol II Rat1-PTTC2)
Descriptor: 5'-3' exoribonuclease 2, DNA (38-MER), DNA-directed RNA polymerase II subunit RPB1, ...
Authors:Zeng, Y, Zhang, Y.
Deposit date:2023-07-23
Release date:2024-01-31
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structural basis of exoribonuclease-mediated mRNA transcription termination.
Nature, 628, 2024
2W8L
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BU of 2w8l by Molmil
Y-family DNA polymerase Dpo4 bypassing N2-naphthyl-guanine adduct in anti orientation
Descriptor: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, 5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP *TP*TP*CP*DOC)-3', 5'-D(*TP*CP*AP*CP*N2GP*GP*AP*AP*TP*CP *CP*TP*TP*CP*CP*CP*CP*C)-3', ...
Authors:Eoff, R.L, Zhang, H, Egli, M, Guengerich, F.P.
Deposit date:2009-01-16
Release date:2009-01-27
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Versatility of Y-Family Sulfolobus Solfataricus DNA Polymerase Dpo4 in Translesion Synthesis Past Bulky N2-Alkylguanine Adducts.
J.Biol.Chem., 284, 2009
2W8K
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BU of 2w8k by Molmil
Y-family DNA polymerase Dpo4 bypassing N2-naphthyl-guanine adduct in syn orientation
Descriptor: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, 5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP *TP*TP*CP*DOC)-3', 5'-D(*TP*CP*AP*CP*N2GP*GP*AP*AP*TP*CP*CP *TP*TP*CP*CP*CP*CP*C)-3', ...
Authors:Eoff, R.L, Zhang, H, Egli, M, Guengerich, F.P.
Deposit date:2009-01-16
Release date:2009-01-27
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Versatility of Y-Family Sulfolobus Solfataricus DNA Polymerase Dpo4 in Translesion Synthesis Past Bulky N2-Alkylguanine Adducts.
J.Biol.Chem., 284, 2009
6VY9
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BU of 6vy9 by Molmil
Crystal structure of NotF prenyltransferase
Descriptor: Deoxybrevianamide E synthase notF
Authors:Dan, Q, Smith, J.L.
Deposit date:2020-02-25
Release date:2021-02-03
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.19 Å)
Cite:Data Science-Driven Analysis of Substrate-Permissive Diketopiperazine Reverse Prenyltransferase NotF: Applications in Protein Engineering and Cascade Biocatalytic Synthesis of (-)-Eurotiumin A.
J.Am.Chem.Soc., 144, 2022
3MAV
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BU of 3mav by Molmil
Crystal structure of Plasmodium vivax putative farnesyl pyrophosphate synthase (Pv092040)
Descriptor: Farnesyl pyrophosphate synthase, SULFATE ION
Authors:Dong, A, Dunford, J, Lew, J, Wernimont, A.K, Ren, H, Zhao, Y, Koeieradzki, I, Opperman, U, Sundstrom, M, Weigelt, J, Edwards, A.M, Arrowsmith, C.H, Bochkarev, A, Hui, R, Artz, J.D, Structural Genomics Consortium (SGC)
Deposit date:2010-03-24
Release date:2010-04-14
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Molecular characterization of a novel geranylgeranyl pyrophosphate synthase from Plasmodium parasites.
J.Biol.Chem., 286, 2011
4OKQ
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BU of 4okq by Molmil
Crystal structure of the single-stranded RNA binding protein HutP from Geobacillus thermodenitrificans
Descriptor: HISTIDINE, Hut operon positive regulatory protein, MAGNESIUM ION
Authors:Thiruselvam, V, Ponnuswamy, M.N, Kumarevel, T.S.
Deposit date:2014-01-22
Release date:2014-03-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of the single-stranded RNA binding protein HutP from Geobacillus thermodenitrificans
Biochem.Biophys.Res.Commun., 446, 2014
3D9S
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BU of 3d9s by Molmil
Human Aquaporin 5 (AQP5) - High Resolution X-ray Structure
Descriptor: Aquaporin-5, O-[(S)-{[(2S)-2-(hexanoyloxy)-3-(tetradecanoyloxy)propyl]oxy}(hydroxy)phosphoryl]-D-serine
Authors:Horsefield, R, Norden, K, Fellert, M, Backmark, A, Tornroth-Horsefield, S, Terwisscha Van Scheltinga, A.C, Kvassman, J, Kjellbom, P, Johanson, U, Neutze, R.
Deposit date:2008-05-27
Release date:2008-08-26
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:High-resolution x-ray structure of human aquaporin 5
Proc.Natl.Acad.Sci.Usa, 105, 2008
3N8W
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BU of 3n8w by Molmil
Crystal Structure of R120Q/Native Cyclooxygenase-1 Heterodimer mutant in complex with Flurbiprofen
Descriptor: 2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, FLURBIPROFEN, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Sidhu, R.S.
Deposit date:2010-05-28
Release date:2010-07-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Comparison of Cyclooxygenase-1 Crystal Structures: Cross-Talk between Monomers Comprising Cyclooxygenase-1 Homodimers
Biochemistry, 49, 2010
3N8Y
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BU of 3n8y by Molmil
Structure of Aspirin Acetylated Cyclooxygenase-1 in Complex with Diclofenac
Descriptor: 2-HYDROXYBENZOIC ACID, 2-[2,6-DICHLOROPHENYL)AMINO]BENZENEACETIC ACID, 2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Sidhu, R.S.
Deposit date:2010-05-28
Release date:2010-07-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Comparison of Cyclooxygenase-1 Crystal Structures: Cross-Talk between Monomers Comprising Cyclooxygenase-1 Homodimers
Biochemistry, 49, 2010
3N8Z
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BU of 3n8z by Molmil
Crystal Structure of Cyclooxygenase-1 in Complex with Flurbiprofen
Descriptor: 2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, FLURBIPROFEN, ...
Authors:Sidhu, R.S.
Deposit date:2010-05-28
Release date:2010-07-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Comparison of Cyclooxygenase-1 Crystal Structures: Cross-Talk between Monomers Comprising Cyclooxygenase-1 Homodimers
Biochemistry, 49, 2010
3NS1
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BU of 3ns1 by Molmil
Crystal Structure of Bovine Xanthine Oxidase in Complex with 6-Mercaptopurine
Descriptor: 9H-purine-6-thiol, DIOXOTHIOMOLYBDENUM(VI) ION, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Cao, H, Pauff, J.M, Hille, R.
Deposit date:2010-07-01
Release date:2010-07-14
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Substrate orientation and catalytic specificity in the action of xanthine oxidase: the sequential hydroxylation of hypoxanthine to uric acid.
J.Biol.Chem., 285, 2010
8ESQ
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BU of 8esq by Molmil
Ytm1 associated nascent 60S ribosome State 2
Descriptor: 25S rRNA (cytosine-C(5))-methyltransferase nop2, 60S ribosomal protein L13, 60S ribosomal protein L14, ...
Authors:Zhou, X, Bilokapic, S, Deshmukh, A.A, Halic, M.
Deposit date:2022-10-14
Release date:2022-11-30
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Chromatin localization of nucleophosmin organizes ribosome biogenesis.
Mol.Cell, 82, 2022
8EUY
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BU of 8euy by Molmil
Ytm1 associated nascent 60S ribosome (-fkbp39) State 1A
Descriptor: 60S ribosomal protein L13, 60S ribosomal protein L14, 60S ribosomal protein L15-A, ...
Authors:Zhou, X, Bilokapic, S, Deshmukh, A.A, Halic, M.
Deposit date:2022-10-19
Release date:2022-11-30
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Chromatin localization of nucleophosmin organizes ribosome biogenesis.
Mol.Cell, 82, 2022

223790

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