PDB: 72678 resultsInfo pagesStatus searchChemie searchBIRD

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6PMO	Co-crystal structure of the Geobacillus kaustophilus glyQ T-box riboswitch discriminator domain in complex with tRNA-Gly Descriptor: IRIDIUM ION, MAGNESIUM ION, T-box riboswitch discriminator, ... Authors: Li, S, Zhang, J. Deposit date: 2019-07-02 Release date: 2019-11-20 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (2.65703368 Å) Cite: Structural basis of amino acid surveillance by higher-order tRNA-mRNA interactions. Nat.Struct.Mol.Biol., 26, 2019
5XLN	Crystal structure of the TRS_UNE-T and 4EHP complex Descriptor: Eukaryotic translation initiation factor 4E type 2, Threonine--tRNA ligase, cytoplasmic Authors: Hwang, J, Nguyen, L.T, Kim, M.H. Deposit date: 2017-05-11 Release date: 2018-11-21 Last modified: 2024-03-27 Method: X-RAY DIFFRACTION (1.9 Å) Cite: A threonyl-tRNA synthetase-mediated translation initiation machinery. Nat Commun, 10, 2019
2KY0	The Structure of RNA Internal Loops with Tandem AG Pairs: 5'GAGC/3'CGAG Descriptor: 5'-R(*GP*AP*CP*GP*AP*GP*CP*GP*UP*CP*A)-3' Authors: Hammond, N.B, Kennedy, S.D, Turner, D.H. Deposit date: 2010-05-13 Release date: 2010-06-02 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: RNA internal loops with tandem AG pairs: the structure of the 5'GAGU/3'UGAG loop can be dramatically different from others, including 5'AAGU/3'UGAA. Biochemistry, 49, 2010
7B7D	Yeast 80S ribosome bound to eEF3 and A/A- and P/P-tRNAs Descriptor: 18S rRNA, 25S rRNA, 40S ribosomal protein S0-A, ... Authors: Ranjan, N, Pochopien, A.A, Wu, C.C, Beckert, B, Blanchet, S, Green, R, Rodnina, M.V, Wilson, D.N. Deposit date: 2020-12-10 Release date: 2021-03-10 Method: ELECTRON MICROSCOPY (3.3 Å) Cite: eEF3 promotes late stages of tRNA translocation including E-tRNA release from the ribosome To Be Published
8OPS	Human terminal uridylyltransferase 7 (TUT7/ZCCHC6) bound with pre-let7g miRNA and Lin28A - complex 1 Descriptor: Protein lin-28 homolog A, RNA (71-MER) Let7g, Terminal uridylyltransferase 7, ... Authors: Yi, G, Ye, M, Gilbert, R.J. Deposit date: 2023-04-08 Release date: 2024-07-24 Last modified: 2024-08-07 Method: ELECTRON MICROSCOPY (3.82 Å) Cite: Structural basis for activity switching in polymerases determining the fate of let-7 pre-miRNAs. Nat.Struct.Mol.Biol., 2024
8OPT	Human terminal uridylyltransferase 7 (TUT7/ZCCHC6) bound with pre-let7g miRNA and Lin28A - complex 2 Descriptor: Protein lin-28 homolog A, RNA (53-MER), Terminal uridylyltransferase 7, ... Authors: Yi, G, Ye, M, Gilbert, R.J. Deposit date: 2023-04-08 Release date: 2024-07-24 Last modified: 2024-08-07 Method: ELECTRON MICROSCOPY (3.65 Å) Cite: Structural basis for activity switching in polymerases determining the fate of let-7 pre-miRNAs. Nat.Struct.Mol.Biol., 2024
259D	RNA HYDRATION: A DETAILED LOOK Descriptor: RNA (5'-R(*CP*CP*CP*CP*GP*GP*GP*G)-3') Authors: Egli, M, Portmann, S, Usman, N. Deposit date: 1996-05-03 Release date: 1996-08-26 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (1.46 Å) Cite: RNA hydration: a detailed look. Biochemistry, 35, 1996
4V6N	Structural characterization of mRNA-tRNA translocation intermediates (50S ribosome of class2 of the six classes) Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... Authors: Agirrezabala, X, Liao, H, Schreiner, E, Fu, J, Ortiz-Meoz, R.F, Schulten, K, Green, R, Frank, J. Deposit date: 2011-12-07 Release date: 2014-07-09 Last modified: 2024-02-28 Method: ELECTRON MICROSCOPY (12.1 Å) Cite: Structural characterization of mRNA-tRNA translocation intermediates. Proc.Natl.Acad.Sci.USA, 109, 2012
4V6P	Structural characterization of mRNA-tRNA translocation intermediates (class 4b of the six classes) Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... Authors: Agirrezabala, X, Liao, H, Schreiner, E, Fu, J, Ortiz-Meoz, R.F, Schulten, K, Green, R, Frank, J. Deposit date: 2011-12-08 Release date: 2014-07-09 Last modified: 2024-05-15 Method: ELECTRON MICROSCOPY (13.5 Å) Cite: Structural characterization of mRNA-tRNA translocation intermediates. Proc.Natl.Acad.Sci.USA, 109, 2012
4V8U	Crystal Structure of 70S Ribosome with Both Cognate tRNAs in the E and P Sites Representing an Authentic Elongation Complex. Descriptor: 16S RIBOSOMAL RNA, 23S RIBOSOMAL RNA, 30S RIBOSOMAL PROTEIN S10, ... Authors: Gao, Y.G, Feng, S, Chen, Y. Deposit date: 2012-08-28 Release date: 2014-07-09 Last modified: 2019-10-30 Method: X-RAY DIFFRACTION (3.7 Å) Cite: Crystal structure of 70S ribosome with both cognate tRNAs in the E and P sites representing an authentic elongation complex. PLoS ONE, 8, 2013
4V5G	The crystal structure of the 70S ribosome bound to EF-Tu and tRNA Descriptor: 16S RIBOSOMAL RNA, 23S RIBOSOMAL RNA, 30S RIBOSOMAL PROTEIN S10, ... Authors: Schmeing, T.M, Voorhees, R.M, Ramakrishnan, V. Deposit date: 2009-09-01 Release date: 2014-07-09 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (3.6 Å) Cite: The crystal structure of the ribosome bound to EF-Tu and aminoacyl-tRNA. Science, 326, 2009
8H53	Human asparaginyl-tRNA synthetase in complex with asparagine-AMP Descriptor: 4-AMINO-1,4-DIOXOBUTAN-2-AMINIUM ADENOSINE-5'-MONOPHOSPHATE, Asparagine--tRNA ligase, cytoplasmic, ... Authors: Park, J.S, Han, B.W. Deposit date: 2022-10-12 Release date: 2023-10-25 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (2.16 Å) Cite: Reaction hijacking inhibition of Plasmodium falciparum asparagine tRNA synthetase. Nat Commun, 15, 2024
4V6O	Structural characterization of mRNA-tRNA translocation intermediates (class 4a of the six classes) Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... Authors: Agirrezabala, X, Liao, H, Schreiner, E, Fu, J, Ortiz-Meoz, R.F, Schulten, K, Green, R, Frank, J. Deposit date: 2011-12-07 Release date: 2014-07-09 Last modified: 2024-05-15 Method: ELECTRON MICROSCOPY (14.7 Å) Cite: Structural characterization of mRNA-tRNA translocation intermediates. Proc.Natl.Acad.Sci.USA, 109, 2012
4V6Q	Structural characterization of mRNA-tRNA translocation intermediates (class 5 of the six classes) Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... Authors: Agirrezabala, X, Liao, H, Schreiner, E, Fu, J, Ortiz-Meoz, R.F, Schulten, K, Green, R, Frank, J. Deposit date: 2011-12-08 Release date: 2014-07-09 Last modified: 2024-05-15 Method: ELECTRON MICROSCOPY (11.5 Å) Cite: Structural characterization of mRNA-tRNA translocation intermediates. Proc.Natl.Acad.Sci.USA, 109, 2012
4TUA	Crystal structure of ASL-Thr bound to Codon ACC-A on the Ribosome Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... Authors: Fagan, C.E, Dunham, C.M. Deposit date: 2014-06-24 Release date: 2015-05-13 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (3.6 Å) Cite: Structural insights into translational recoding by frameshift suppressor tRNASufJ. Rna, 20, 2014
4TUD	Crystal structure of ASL-SufJ bound to Codon ACC-C on the Ribosome Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... Authors: Fagan, C.E, Dunham, C.M. Deposit date: 2014-06-24 Release date: 2015-05-13 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (3.6 Å) Cite: Structural insights into translational recoding by frameshift suppressor tRNASufJ. Rna, 20, 2014
4TUE	Crystal structure of ASL-SufJ bound to Codon ACC-U on the Ribosome Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... Authors: Fagan, C.E, Dunham, C.M. Deposit date: 2014-06-24 Release date: 2015-05-13 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (3.5 Å) Cite: Structural insights into translational recoding by frameshift suppressor tRNASufJ. Rna, 20, 2014
4TUC	Crystal structure of ASL-SufJ bound to Codon ACC-A on the Ribosome Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... Authors: Fagan, C.E, Dunham, C.M. Deposit date: 2014-06-24 Release date: 2015-05-13 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (3.6 Å) Cite: Structural insights into translational recoding by frameshift suppressor tRNASufJ. Rna, 20, 2014
7OI3	Cryo-EM structure of the Cetacean morbillivirus nucleoprotein-RNA complex Descriptor: Cetacean morbillivirus nucleoprotein, poly-A 6-mer Authors: Zinzula, L, Beck, F, Klumpe, S, Bohn, S, Pfeifer, G, Bollschweiler, D, Nagy, I, Plitzko, J.M, Baumeister, W. Deposit date: 2021-05-11 Release date: 2021-06-23 Last modified: 2024-07-10 Method: ELECTRON MICROSCOPY (4 Å) Cite: Cryo-EM structure of the cetacean morbillivirus nucleoprotein-RNA complex. J.Struct.Biol., 213, 2021
5LZW	Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a truncated mRNA. Descriptor: 18S ribosomal RNA, 28S ribosomal RNA, 5.8S ribosomal RNA, ... Authors: Shao, S, Murray, J, Brown, A, Taunton, J, Ramakrishnan, V, Hegde, R.S. Deposit date: 2016-10-02 Release date: 2016-11-30 Last modified: 2019-12-11 Method: ELECTRON MICROSCOPY (3.53 Å) Cite: Decoding Mammalian Ribosome-mRNA States by Translational GTPase Complexes. Cell, 167, 2016
4LZZ	Nucleotide-induced asymmetry within atpase activator ring drives s54-RNAP interaction and ATP hydrolysis Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Transcriptional regulator (NtrC family), ... Authors: Sysoeva, T.A, Chowdhury, S, Guo, L, Nixon, B.T. Deposit date: 2013-08-01 Release date: 2013-12-04 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (3.21 Å) Cite: Nucleotide-induced asymmetry within ATPase activator ring drives sigma 54-RNAP interaction and ATP hydrolysis. Genes Dev., 27, 2013
1AUD	U1A-UTRRNA, NMR, 31 STRUCTURES Descriptor: RNA 3UTR, U1A 102 Authors: Allain, F.H.-T, Gubser, C.C, Howe, P.W.A, Nagai, K, Neuhaus, D, Varani, G. Deposit date: 1997-08-22 Release date: 1998-02-25 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: Structural basis of the RNA-binding specificity of human U1A protein. EMBO J., 16, 1997
5BNZ	Crystal structure of Glutamine-tRNA ligase /Glutaminyl-tRNA synthetase (GlnRS) from Pseudomonas aeruginosa Descriptor: CHLORIDE ION, Glutamine--tRNA ligase, SULFATE ION Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID) Deposit date: 2015-05-26 Release date: 2015-06-03 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Crystal structure of Glutamine-tRNA ligase /Glutaminyl-tRNA synthetase (GlnRS) from Pseudomonas aeruginosa to be published
5LZY	Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a polyadenylated mRNA. Descriptor: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S12, ... Authors: Shao, S, Murray, J, Brown, A, Taunton, J, Ramakrishnan, V, Hegde, R.S. Deposit date: 2016-10-02 Release date: 2016-11-30 Last modified: 2024-05-15 Method: ELECTRON MICROSCOPY (3.99 Å) Cite: Decoding Mammalian Ribosome-mRNA States by Translational GTPase Complexes. Cell, 167, 2016
4W7S	Crystal structure of the yeast DEAD-box splicing factor Prp28 at 2.54 Angstroms resolution Descriptor: GLYCEROL, HEXAETHYLENE GLYCOL, MAGNESIUM ION, ... Authors: Jacewicz, A, Smith, P, Schwer, B, Shuman, S. Deposit date: 2014-08-22 Release date: 2014-10-29 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (2.542 Å) Cite: Crystal structure, mutational analysis and RNA-dependent ATPase activity of the yeast DEAD-box pre-mRNA splicing factor Prp28. Nucleic Acids Res., 42, 2014

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