PDB: 2535 resultsInfo pagesStatus searchChemie searchBIRD

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5WFK	70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C3) Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... Authors: Fislage, M, Frank, J. Deposit date: 2017-07-12 Release date: 2018-05-02 Last modified: 2024-10-23 Method: ELECTRON MICROSCOPY (3.4 Å) Cite: Cryo-EM shows stages of initial codon selection on the ribosome by aa-tRNA in ternary complex with GTP and the GTPase-deficient EF-TuH84A. Nucleic Acids Res., 46, 2018
6WMP	F. tularensis RNAPs70-iglA DNA complex Descriptor: DNA NT-strand, DNA T-strand, DNA-directed RNA polymerase subunit alpha 1, ... Authors: Travis, B.A, Brennan, R.G, Schumacher, M.A. Deposit date: 2020-04-21 Release date: 2020-11-11 Last modified: 2024-03-06 Method: ELECTRON MICROSCOPY (2.98 Å) Cite: Structural Basis for Virulence Activation of Francisella tularensis. Mol.Cell, 81, 2021
6D3P	Crystal structure of an exoribonuclease-resistant RNA from Sweet clover necrotic mosaic virus (SCNMV) Descriptor: IRIDIUM HEXAMMINE ION, RNA (45-MER) Authors: Steckelberg, A.-L, Akiyama, B.M, Costantino, D.A, Sit, T.L, Nix, J.C, Kieft, J.S. Deposit date: 2018-04-16 Release date: 2018-06-20 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (2.9 Å) Cite: A folded viral noncoding RNA blocks host cell exoribonucleases through a conformationally dynamic RNA structure. Proc. Natl. Acad. Sci. U.S.A., 115, 2018
7EDX	p53-bound TFIID-based core PIC on HDM2 promoter Descriptor: DNA (84-mer), DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit F, ... Authors: Chen, X, Qi, Y, Hou, H, Wang, X, Wu, Z, Li, J, Xu, Y. Deposit date: 2021-03-17 Release date: 2021-05-05 Last modified: 2024-10-23 Method: ELECTRON MICROSCOPY (4.5 Å) Cite: Structural insights into preinitiation complex assembly on core promoters. Science, 372, 2021
7EG7	TFIID-based core PIC on SCP promoter Descriptor: DNA (79-MER), DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit F, ... Authors: Chen, X, Qi, Y, Hou, H, Wang, X, Wu, Z, Li, J, Xu, Y. Deposit date: 2021-03-24 Release date: 2021-05-05 Last modified: 2024-10-09 Method: ELECTRON MICROSCOPY (6.2 Å) Cite: Structural insights into preinitiation complex assembly on core promoters. Science, 372, 2021
7EGA	TFIID-based intermediate PIC on PUMA promoter Descriptor: DNA (85-MER), DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit F, ... Authors: Chen, X, Wu, Z, Hou, H, Qi, Y, Wang, X, Li, J, Xu, Y. Deposit date: 2021-03-24 Release date: 2021-05-05 Last modified: 2021-05-19 Method: ELECTRON MICROSCOPY (4.1 Å) Cite: Structural insights into preinitiation complex assembly on core promoters. Science, 372, 2021
7EG9	TFIID-based intermediate PIC on SCP promoter Descriptor: DNA (79-MER), DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit F, ... Authors: Chen, X, Qi, Y, Wang, X, Wu, Z, Li, J, Xu, Y. Deposit date: 2021-03-24 Release date: 2021-05-05 Last modified: 2024-10-23 Method: ELECTRON MICROSCOPY (3.7 Å) Cite: Structural insights into preinitiation complex assembly on core promoters. Science, 372, 2021
7EG8	TFIID-based core PIC on PUMA promoter Descriptor: DNA (85-MER), DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit F, ... Authors: Chen, X, Qi, Y, Hou, H, Wang, X, Wu, Z, Li, J, Xu, Y. Deposit date: 2021-03-24 Release date: 2021-05-05 Last modified: 2024-11-13 Method: ELECTRON MICROSCOPY (7.4 Å) Cite: Structural insights into preinitiation complex assembly on core promoters. Science, 372, 2021
6PB4	The E. coli class-II CAP-dependent transcription activation complex with de novo RNA transcript at the state 2 Descriptor: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ... Authors: Liu, B, Shi, W. Deposit date: 2019-06-13 Release date: 2020-03-18 Last modified: 2024-03-20 Method: ELECTRON MICROSCOPY (4.35 Å) Cite: Visualization of two architectures in class-II CAP-dependent transcription activation Plos Biol., 18, 2020
6XAS	CryoEM Structure of E. coli Rho-dependent Transcription Pre-termination Complex Descriptor: DNA (29-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ... Authors: Hao, Z.T, Kim, H.K, Walz, T, Nudler, E. Deposit date: 2020-06-04 Release date: 2020-12-16 Last modified: 2024-03-06 Method: ELECTRON MICROSCOPY (3.8 Å) Cite: Pre-termination Transcription Complex: Structure and Function. Mol.Cell, 81, 2021
8TVQ	Cryo-EM structure of CPD stalled 10-subunit Pol II in complex with Rad26 Descriptor: DNA (NTS), DNA (TS), DNA repair and recombination protein RAD26, ... Authors: Sarsam, R.D, Lahiri, I, Leschziner, A.E. Deposit date: 2023-08-18 Release date: 2024-01-24 Last modified: 2024-10-16 Method: ELECTRON MICROSCOPY (4.6 Å) Cite: Elf1 promotes Rad26's interaction with lesion-arrested Pol II for transcription-coupled repair. Proc.Natl.Acad.Sci.USA, 121, 2024
6Z6L	Cryo-EM structure of human CCDC124 bound to 80S ribosomes Descriptor: 18S rRNA, 28S rRNA, 40S ribosomal protein S10, ... Authors: Wells, J.N, Buschauer, R, Mackens-Kiani, T, Best, K, Kratzat, H, Berninghausen, O, Becker, T, Cheng, J, Beckmann, R. Deposit date: 2020-05-28 Release date: 2020-07-29 Last modified: 2024-05-22 Method: ELECTRON MICROSCOPY (3 Å) Cite: Structure and function of yeast Lso2 and human CCDC124 bound to hibernating ribosomes. Plos Biol., 18, 2020
6LDI	The cryo-EM structure of E. coli CueR transcription activation complex Descriptor: DNA (50-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ... Authors: Fang, C.L, Zhang, Y. Deposit date: 2019-11-21 Release date: 2020-09-30 Last modified: 2024-03-27 Method: ELECTRON MICROSCOPY (3.69 Å) Cite: CueR activates transcription through a DNA distortion mechanism. Nat.Chem.Biol., 17, 2021
8EHI	Cryo-EM structure of his-elemental paused elongation complex with an unfolded TL (2) Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ... Authors: Kang, J.Y, Chen, J, Llewellyn, E, Landick, R, Darst, S.A. Deposit date: 2022-09-14 Release date: 2023-03-01 Last modified: 2024-06-19 Method: ELECTRON MICROSCOPY (5.5 Å) Cite: An ensemble of interconverting conformations of the elemental paused transcription complex creates regulatory options. Proc.Natl.Acad.Sci.USA, 120, 2023
8EHF	Cryo-EM structure of his-elemental paused elongation complex with an unfolded TL (1) Descriptor: (3R,5S,7R,8R,9S,10S,12S,13R,14S,17R)-10,13-dimethyl-17-[(2R)-pentan-2-yl]-2,3,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydro-1H-cyclopenta[a]phenanthrene-3,7,12-triol, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ... Authors: Kang, J.Y, Chen, J, Llewellyn, E, Landick, R, Darst, S.A. Deposit date: 2022-09-14 Release date: 2023-03-01 Last modified: 2024-06-19 Method: ELECTRON MICROSCOPY (3.3 Å) Cite: An ensemble of interconverting conformations of the elemental paused transcription complex creates regulatory options. Proc.Natl.Acad.Sci.USA, 120, 2023
8EG8	Cryo-EM structure of consensus elemental paused elongation complex with a folded TL Descriptor: CHAPSO, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ... Authors: Kang, J.Y, Chen, J, Llewellyn, E, Landick, R, Darst, S.A. Deposit date: 2022-09-12 Release date: 2023-03-01 Last modified: 2024-06-19 Method: ELECTRON MICROSCOPY (3.3 Å) Cite: An ensemble of interconverting conformations of the elemental paused transcription complex creates regulatory options. Proc.Natl.Acad.Sci.USA, 120, 2023
8EHA	Cryo-EM structure of his-elemental paused elongation complex with a folded TL and a rotated RH-FL (out) Descriptor: CHAPSO, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ... Authors: Kang, J.Y, Chen, J, Llewellyn, E, Landick, R, Darst, S.A. Deposit date: 2022-09-14 Release date: 2023-03-01 Last modified: 2024-06-19 Method: ELECTRON MICROSCOPY (3.7 Å) Cite: An ensemble of interconverting conformations of the elemental paused transcription complex creates regulatory options. Proc.Natl.Acad.Sci.USA, 120, 2023
8EGB	Cryo-EM structure of consensus elemental paused elongation complex with an unfolded TL Descriptor: CHAPSO, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ... Authors: Kang, J.Y, Chen, J, Llewellyn, E, Landick, R, Darst, S.A. Deposit date: 2022-09-12 Release date: 2023-03-01 Last modified: 2024-06-19 Method: ELECTRON MICROSCOPY (3.8 Å) Cite: An ensemble of interconverting conformations of the elemental paused transcription complex creates regulatory options. Proc.Natl.Acad.Sci.USA, 120, 2023
8EG7	Cryo-EM structure of pre-consensus elemental paused elongation complex Descriptor: CHAPSO, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ... Authors: Kang, J.Y, Chen, J, Llewellyn, E, Landick, R, Darst, S.A. Deposit date: 2022-09-11 Release date: 2023-03-01 Last modified: 2024-06-19 Method: ELECTRON MICROSCOPY (3.2 Å) Cite: An ensemble of interconverting conformations of the elemental paused transcription complex creates regulatory options. Proc.Natl.Acad.Sci.USA, 120, 2023
8EH8	Cryo-EM structure of his-elemental paused elongation complex with a folded TL and a rotated RH-FL (1) Descriptor: CHAPSO, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ... Authors: Kang, J.Y, Chen, J, Llewellyn, E, Landick, R, Darst, S.A. Deposit date: 2022-09-13 Release date: 2023-03-01 Last modified: 2024-06-19 Method: ELECTRON MICROSCOPY (3.4 Å) Cite: An ensemble of interconverting conformations of the elemental paused transcription complex creates regulatory options. Proc.Natl.Acad.Sci.USA, 120, 2023
8EH9	Cryo-EM structure of his-elemental paused elongation complex with a folded TL and a rotated RH-FL (2) Descriptor: CHAPSO, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ... Authors: Kang, J.Y, Chen, J, Llewellyn, E, Landick, R, Darst, S.A. Deposit date: 2022-09-13 Release date: 2023-03-01 Last modified: 2024-06-19 Method: ELECTRON MICROSCOPY (3.9 Å) Cite: An ensemble of interconverting conformations of the elemental paused transcription complex creates regulatory options. Proc.Natl.Acad.Sci.USA, 120, 2023
8GZH	Cryo-EM structure of Synechocystis sp. PCC 6803 CTP-bound RPitc Descriptor: CYTIDINE-5'-TRIPHOSPHATE, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ... Authors: You, L.L, Shen, L.Q, Zhang, Y. Deposit date: 2022-09-27 Release date: 2023-04-19 Last modified: 2024-10-30 Method: ELECTRON MICROSCOPY (2.96 Å) Cite: An SI3-sigma arch stabilizes cyanobacteria transcription initiation complex. Proc.Natl.Acad.Sci.USA, 120, 2023
8GZG	Cryo-EM structure of Synechocystis sp. PCC 6803 RPitc Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ... Authors: Shen, L.Q, You, L.L, Zhang, Y. Deposit date: 2022-09-27 Release date: 2023-04-19 Last modified: 2024-10-30 Method: ELECTRON MICROSCOPY (3.13 Å) Cite: An SI3-sigma arch stabilizes cyanobacteria transcription initiation complex. Proc.Natl.Acad.Sci.USA, 120, 2023
7YP9	Cryo-EM structure of Escherichia coli paused complex of transcription termination (TTC-pause) Descriptor: DNA (31-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ... Authors: You, L.L, Zhang, Y. Deposit date: 2022-08-03 Release date: 2022-11-16 Last modified: 2024-07-03 Method: ELECTRON MICROSCOPY (3.58 Å) Cite: Structural basis for intrinsic transcription termination. Nature, 613, 2023
7YPA	Cryo-EM structure of Escherichia coli hairpin-nucleation complex of transcription termination (TTC-hairpin) Descriptor: DNA (31-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ... Authors: You, L.L, Zhang, Y. Deposit date: 2022-08-03 Release date: 2022-11-16 Last modified: 2024-07-03 Method: ELECTRON MICROSCOPY (3.05 Å) Cite: Structural basis for intrinsic transcription termination. Nature, 613, 2023

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