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2CQ4
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solution structure of RNA binding domain in RNA binding motif protein 23
Descriptor: RNA binding motif protein 23
Authors:Tsuda, K, Muto, Y, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-05-19
Release date:2005-11-19
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:solution structure of RNA binding domain in RNA binding motif protein 23
To be Published
1IO3
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BU of 1io3 by Molmil
CRYSTAL STRUCTURE OF FERRICYTOCHROME C2 FROM RHODOPSEUDOMONAS VIRIDIS
Descriptor: CYTOCHROME C2, HEME C
Authors:Miki, K, Sogabe, S.
Deposit date:2001-01-06
Release date:2001-04-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of the oxidized cytochrome c(2) from Blastochloris viridis.
FEBS Lett., 491, 2001
2CQP
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BU of 2cqp by Molmil
Solution structure of the RNA binding domain of RNA-binding protein 12
Descriptor: RNA-binding protein 12
Authors:Suzuki, S, Muto, Y, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-05-20
Release date:2005-11-20
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the RNA binding domain of RNA-binding protein 12
To be Published
1IOC
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BU of 1ioc by Molmil
CRYSTAL STRUCTURE OF MUTANT HUMAN LYSOZYME, EAEA-I56T
Descriptor: LYSOZYME C, SODIUM ION
Authors:Goda, S, Takano, K, Yamagata, Y, Yutani, K.
Deposit date:2001-02-27
Release date:2002-10-09
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Elongation in a beta-structure promotes amyloid-like fibril formation of human lysozyme.
J.Biochem., 132, 2002
2CSH
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BU of 2csh by Molmil
Solution structure of tandem repeat of the zf-C2H2 domains of human zinc finger protein 297B
Descriptor: ZINC ION, Zinc finger protein 297B
Authors:Inoue, K, Saitoh, K, Hayashi, F, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-05-21
Release date:2005-11-21
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of tandem repeat of the zf-C2H2 domains of human zinc finger protein 297B
To be Published
3FC2
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PLK1 in complex with BI6727
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Bader, G.
Deposit date:2008-11-21
Release date:2009-05-12
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:BI 6727, A Polo-like Kinase Inhibitor with Improved Pharmacokinetic Profile and Broad Antitumor Activity.
Clin.Cancer Res., 15, 2009
2CTK
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BU of 2ctk by Molmil
Solution structure of the 12th KH type I domain from human Vigilin
Descriptor: Vigilin
Authors:Tomizawa, T, Kigawa, T, Koshiba, S, Inoue, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-05-24
Release date:2005-11-24
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the 12th KH type I domain from human Vigilin
To be Published
1SMF
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BU of 1smf by Molmil
Studies on an artificial trypsin inhibitor peptide derived from the mung bean inhibitor
Descriptor: BOWMAN-BIRK TYPE TRYPSIN INHIBITOR, CALCIUM ION, TRYPSIN
Authors:Huang, Q, Li, Y, Zhang, S, Liu, S, Tang, Y, Qi, C.
Deposit date:1992-10-24
Release date:1994-07-31
Last modified:2017-06-28
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Studies on an artificial trypsin inhibitor peptide derived from the mung bean trypsin inhibitor: chemical synthesis, refolding, and crystallographic analysis of its complex with trypsin.
J.Biochem.(Tokyo), 116, 1994
2CUD
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BU of 2cud by Molmil
Solution structure of the SH3 domain of the human SRC-like adopter protein (SLAP)
Descriptor: SRC-like-adapter
Authors:Ohnishi, S, Kigawa, T, Tochio, N, Sato, M, Nameki, N, Koshiba, S, Inoue, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-05-26
Release date:2005-11-26
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the SH3 domain of the human SRC-like adopter protein (SLAP)
To be Published
2CQ3
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solution structure of RNA binding domain in RNA binding motif protein 9
Descriptor: RNA-binding protein 9
Authors:Tsuda, K, Muto, Y, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-05-19
Release date:2005-11-19
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:solution structure of RNA binding domain in RNA binding motif protein 9
To be Published
1IR8
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BU of 1ir8 by Molmil
IM mutant of lysozyme
Descriptor: lysozyme
Authors:Ohmura, T, Ueda, T, Hashimoto, Y, Imoto, T.
Deposit date:2001-09-19
Release date:2001-10-03
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Tolerance of point substitution of methionine for isoleucine in hen egg white lysozyme.
Protein Eng., 14, 2001
3F5U
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BU of 3f5u by Molmil
Crystal structure of the death associated protein kinase in complex with AMPPNP and Mg2+
Descriptor: Death-associated protein kinase 1, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:McNamara, L.K, Watterson, D.M, Brunzelle, J.S.
Deposit date:2008-11-04
Release date:2009-03-24
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural insight into nucleotide recognition by human death-associated protein kinase.
Acta Crystallogr.,Sect.D, 65, 2009
2CTJ
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BU of 2ctj by Molmil
Solution structure of the 8th KH type I domain from human Vigilin
Descriptor: Vigilin
Authors:Tomizawa, T, Kigawa, T, Koshiba, S, Inoue, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-05-24
Release date:2005-11-24
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the 8th KH type I domain from human Vigilin
To be Published
1IVD
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BU of 1ivd by Molmil
STRUCTURES OF AROMATIC INHIBITORS OF INFLUENZA VIRUS NEURAMINIDASE
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(ACETYLAMINO)-3-HYDROXY-5-NITROBENZOIC ACID, CALCIUM ION, ...
Authors:Jedrzejas, M.J, Luo, M.
Deposit date:1994-12-12
Release date:1995-03-31
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structures of aromatic inhibitors of influenza virus neuraminidase.
Biochemistry, 34, 1995
2D0N
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BU of 2d0n by Molmil
Crystal structure of the C-terminal SH3 domain of the adaptor protein GADS in complex with SLP-76 motif peptide reveals a unique SH3-SH3 interaction
Descriptor: GRB2-related adaptor protein 2, SLP-76 binding peptide
Authors:Dimasi, N.
Deposit date:2005-08-04
Release date:2005-08-23
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Crystal structure of the C-terminal SH3 domain of the adaptor protein GADS in complex with SLP-76 motif peptide reveals a unique SH3-SH3 interaction
Int.J.Biochem.Cell Biol., 39, 2007
1INF
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BU of 1inf by Molmil
INFLUENZA VIRUS B/LEE/40 NEURAMINIDASE COMPLEXED WITH BANA113 INHIBITOR
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(ACETYLAMINO)-3-GUANIDINOBENZOIC ACID, CALCIUM ION, ...
Authors:Jedrzejas, M.J, Luo, M.
Deposit date:1995-07-07
Release date:1996-08-17
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure-based inhibitors of influenza virus sialidase. A benzoic acid lead with novel interaction.
J.Med.Chem., 38, 1995
1INW
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BU of 1inw by Molmil
A SIALIC ACID DERIVED PHOSPHONATE ANALOG INHIBITS DIFFERENT STRAINS OF INFLUENZA VIRUS NEURAMINIDASE WITH DIFFERENT EFFICIENCIES
Descriptor: (1S)-4-acetamido-1,5-anhydro-2,4-dideoxy-1-phosphono-D-glycero-D-galacto-octitol, 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:White, C.L, Janakiraman, M.N, Laver, W.G, Philippon, C, Vasella, A, Air, G.M, Luo, M.
Deposit date:1994-09-26
Release date:1995-02-07
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:A sialic acid-derived phosphonate analog inhibits different strains of influenza virus neuraminidase with different efficiencies.
J.Mol.Biol., 245, 1995
1IY4
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BU of 1iy4 by Molmil
Solution structure of the human lysozyme at 35 degree C
Descriptor: Lysozyme
Authors:Kumeta, H, Miura, A, Kobashigawa, Y, Miura, K, Oka, C, Nitta, K, Nemoto, N, Tsuda, S.
Deposit date:2002-07-15
Release date:2002-07-31
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Low-temperature-induced structural changes in human lysozyme elucidated by three-dimensional NMR spectroscopy
Biochemistry, 42, 2003
2CR4
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BU of 2cr4 by Molmil
Solution structure of the SH2 domain of human SH3BP2 protein
Descriptor: SH3 domain-binding protein 2
Authors:Hatta, R, Tomizawa, T, Hayashi, F, Yoshida, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-05-20
Release date:2005-11-20
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the SH2 domain of human SH3BP2 protein
To be Published
1WSD
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BU of 1wsd by Molmil
Alkaline M-protease form I crystal structure
Descriptor: CALCIUM ION, M-protease, SULFATE ION
Authors:Shirai, T, Suzuki, A, Yamane, T, Ashida, T, Kobayashi, T, Hitomi, J, Ito, S.
Deposit date:2004-11-05
Release date:2004-11-16
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:High-resolution crystal structure of M-protease: phylogeny aided analysis of the high-alkaline adaptation mechanism
Protein Eng., 10, 1997
1J16
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BU of 1j16 by Molmil
BENZAMIDINE IN COMPLEX WITH RAT TRYPSIN MUTANT X99/175/190RT
Descriptor: BENZAMIDINE, CALCIUM ION, SULFATE ION, ...
Authors:Stubbs, M.T.
Deposit date:2002-11-30
Release date:2002-12-23
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Reconstructing the Binding Site of Factor Xa in Trypsin Reveals Ligand-induced Structural Plasticity
J.MOL.BIOL., 325, 2003
1J1B
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BU of 1j1b by Molmil
Binary complex structure of human tau protein kinase I with AMPPNP
Descriptor: Glycogen synthase kinase-3 beta, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Aoki, M, Yokota, T, Sugiura, I, Sasaki, C, Hasegawa, T, Okumura, C, Kohno, T, Sugio, S, Matsuzaki, T.
Deposit date:2002-12-03
Release date:2003-12-03
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural insight into nucleotide recognition in tau-protein kinase I/glycogen synthase kinase 3 beta.
Acta Crystallogr.,Sect.D, 60, 2004
2CUI
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BU of 2cui by Molmil
Solution structure of the 31st fibronectin type III domain of the human tenascin X
Descriptor: Tenascin-X
Authors:Ohnishi, S, Kigawa, T, Tochio, N, Koshiba, S, Inoue, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-05-26
Release date:2005-11-26
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the 31st fibronectin type III domain of the human tenascin X
To be Published
1WSG
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BU of 1wsg by Molmil
Co-crystal structure of E.coli RNase HI active site mutant (E48A/D134N*) with Mn2+
Descriptor: MANGANESE (II) ION, Ribonuclease HI
Authors:Tsunaka, Y, Takano, K, Matsumura, H, Yamagata, Y, Kanaya, S.
Deposit date:2004-11-05
Release date:2005-02-08
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Identification of Single Mn(2+) Binding Sites Required for Activation of the Mutant Proteins of E.coli RNase HI at Glu48 and/or Asp134 by X-ray Crystallography
J.Mol.Biol., 345, 2005
1J3F
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Crystal Structure of an Artificial Metalloprotein:Cr(III)(3,3'-Me2-salophen)/apo-A71G Myoglobin
Descriptor: 'N,N'-BIS-(2-HYDROXY-3-METHYL-BENZYLIDENE)-BENZENE-1,2-DIAMINE', CHROMIUM ION, Myoglobin, ...
Authors:Koshiyama, T, Kono, M, Ohashi, M, Ueno, T, Suzuki, A, Yamane, T, Watanabe, Y.
Deposit date:2003-01-24
Release date:2004-05-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Coordinated Design of Cofactor and Active Site Structures in Development of New Protein Catalysts
J.Am.Chem.Soc., 127, 2005

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