Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

6WFQ
DownloadVisualize
BU of 6wfq by Molmil
NanR dimer-DNA hetero-complex
Descriptor: DNA (5'-D(P*GP*GP*TP*AP*TP*AP*AP*CP*AP*GP*GP*TP*AP*TP*A)-3'), DNA (5'-D(P*TP*AP*TP*AP*CP*CP*TP*GP*TP*TP*AP*TP*AP*CP*C)-3'), HTH-type transcriptional repressor NanR
Authors:Hariprasad, V, Horne, C, Santosh, P, Amy, H, Emre, B, Rachel, N, Michael, G, Georg, R, Borries, D, Renwick, D.
Deposit date:2020-04-03
Release date:2021-03-10
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Mechanism of NanR gene repression and allosteric induction of bacterial sialic acid metabolism.
Nat Commun, 12, 2021
4LSA
DownloadVisualize
BU of 4lsa by Molmil
Crystal structure of BRI1 sud1 (Gly643Glu) bound to brassinolide
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Brassinolide, Protein BRASSINOSTEROID INSENSITIVE 1, ...
Authors:Santiago, J, Henzler, C, Hothorn, M.
Deposit date:2013-07-22
Release date:2013-09-04
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Molecular mechanism for plant steroid receptor activation by somatic embryogenesis co-receptor kinases.
Science, 341, 2013
6WSM
DownloadVisualize
BU of 6wsm by Molmil
Crystal structure of coiled coil region of human septin 8
Descriptor: SULFATE ION, Septin-8
Authors:Cabrejos, D.A.L, Cavini, I, Sala, F.A, Valadares, N.F, Pereira, H.M, Brandao-Neto, J, Nascimento, A.F.Z, Uson, I, Araujo, A.P.U, Garratt, R.C.
Deposit date:2020-05-01
Release date:2021-03-17
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.451 Å)
Cite:Orientational Ambiguity in Septin Coiled Coils and its Structural Basis.
J.Mol.Biol., 433, 2021
5JUZ
DownloadVisualize
BU of 5juz by Molmil
Crystal structure of human FPPS in complex with an allosteric inhibitor CL-06-057
Descriptor: CHLORIDE ION, Farnesyl pyrophosphate synthase, [(R)-(2,3-dihydro-1-benzofuran-5-yl){[6-(4-methylphenyl)thieno[2,3-d]pyrimidin-4-yl]amino}methyl]phosphonic acid
Authors:Park, J, Magder, A, Leung, C.Y, Tsantrizos, Y.S, Berghuis, A.M.
Deposit date:2016-05-10
Release date:2017-03-15
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Pharmacophore Mapping of Thienopyrimidine-Based Monophosphonate (ThP-MP) Inhibitors of the Human Farnesyl Pyrophosphate Synthase.
J. Med. Chem., 60, 2017
5E5T
DownloadVisualize
BU of 5e5t by Molmil
Quasi-racemic snakin-1 in P1 after radiation damage
Descriptor: 1,2-ETHANEDIOL, D- snakin-1, FORMIC ACID, ...
Authors:Yeung, H, Squire, C.J, Yosaatmadja, Y, Panjikar, S, Baker, E.N, Harris, P.W.R, Brimble, M.A.
Deposit date:2015-10-09
Release date:2016-05-18
Last modified:2025-04-02
Method:X-RAY DIFFRACTION (1.572 Å)
Cite:Radiation Damage and Racemic Protein Crystallography Reveal the Unique Structure of the GASA/Snakin Protein Superfamily.
Angew.Chem.Int.Ed.Engl., 55, 2016
5YT0
DownloadVisualize
BU of 5yt0 by Molmil
Crystal structure of the complex of archaeal ribosomal stalk protein aP1 and archaeal translation initiation factor aIF5B
Descriptor: Archaeal ribosomal stalk protein aP1, GUANOSINE-5'-DIPHOSPHATE, Probable translation initiation factor IF-2
Authors:Murakami, R, Singh, C.R, Morris, J, Tang, L, Harmon, I, Miyoshi, T, Ito, K, Asano, K, Uchiumi, T.
Deposit date:2017-11-16
Release date:2018-06-27
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:The Interaction between the Ribosomal Stalk Proteins and Translation Initiation Factor 5B Promotes Translation Initiation
Mol. Cell. Biol., 38, 2018
8UP4
DownloadVisualize
BU of 8up4 by Molmil
Crystal structure of Lsd18 (a flavin-dependent monooxygenase)
Descriptor: CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, Flavin-dependent monooxygenase Lsd18
Authors:Wang, Q, Chen, X, Kim, C.Y.
Deposit date:2023-10-20
Release date:2024-12-18
Last modified:2025-06-18
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Structural Basis of Sequential Enantioselective Epoxidation by a Flavin-Dependent Monooxygenase in Lasalocid A Biosynthesis.
Angew.Chem.Int.Ed.Engl., 64, 2025
6D42
DownloadVisualize
BU of 6d42 by Molmil
Crystal structure of the KCa3.1 C-terminal four-helix bundle (with copper)
Descriptor: COPPER (II) ION, Intermediate conductance calcium-activated potassium channel protein 4
Authors:Hubbard, S.R, Ji, T.
Deposit date:2018-04-17
Release date:2018-07-11
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.75013649 Å)
Cite:Crystal structure of the C-terminal four-helix bundle of the potassium channel KCa3.1.
PLoS ONE, 13, 2018
6M5H
DownloadVisualize
BU of 6m5h by Molmil
A class C beta-lactamase mutant - Y150F
Descriptor: Beta-lactamase
Authors:Bae, D.W, Jung, Y.E, Cha, S.S.
Deposit date:2020-03-10
Release date:2021-01-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Novel inhibition mechanism of carbapenems on the ACC-1 class C beta-lactamase.
Arch.Biochem.Biophys., 693, 2020
4MBT
DownloadVisualize
BU of 4mbt by Molmil
Structure of haze forming proteins in white wines: Vitis vinifera thaumatin-like proteins
Descriptor: GLYCEROL, VVTL1
Authors:Marangon, M, Menz, R.I, Waters, E.J, Van Sluyter, S.C.
Deposit date:2013-08-19
Release date:2014-08-27
Last modified:2024-11-27
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structure of Haze Forming Proteins in White Wines: Vitis vinifera Thaumatin-Like Proteins.
Plos One, 9, 2014
3X3N
DownloadVisualize
BU of 3x3n by Molmil
Crystal structure of EccB1 of Mycobacterium tuberculosis in spacegroup P21
Descriptor: CALCIUM ION, ESX-1 secretion system protein EccB1
Authors:Zhang, X.L, Li, D.F, Zhang, X.E, Bi, L.J, Wang, D.C.
Deposit date:2015-01-24
Release date:2015-12-09
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Core component EccB1 of the Mycobacterium tuberculosis type VII secretion system is a periplasmic ATPase.
Faseb J., 29, 2015
1MOF
DownloadVisualize
BU of 1mof by Molmil
COAT PROTEIN
Descriptor: CHLORIDE ION, MOLONEY MURINE LEUKEMIA VIRUS P15
Authors:Fass, D, Harrison, S.C, Kim, P.S.
Deposit date:1996-04-02
Release date:1996-10-14
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Retrovirus envelope domain at 1.7 angstrom resolution.
Nat.Struct.Biol., 3, 1996
4XI2
DownloadVisualize
BU of 4xi2 by Molmil
Crystal Structure of an auto-inhibited form of Bruton's Tryrosine Kinase
Descriptor: GOLD ION, Tyrosine-protein kinase BTK
Authors:Vogan, E.M, Harrison, S.C.
Deposit date:2015-01-06
Release date:2015-02-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Autoinhibition of Bruton's tyrosine kinase (Btk) and activation by soluble inositol hexakisphosphate.
Elife, 4, 2015
8GAP
DownloadVisualize
BU of 8gap by Molmil
Structure of LARP7 protein p65-telomerase RNA complex in telomerase
Descriptor: Telomerase La-related protein p65, Telomerase RNA, Telomerase associated protein p50, ...
Authors:Wang, Y, He, Y, Wang, Y, Yang, Y, Singh, M, Eichhorn, C.D, Zhou, Z.H, Feigon, J.
Deposit date:2023-02-23
Release date:2023-06-28
Last modified:2025-06-04
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structure of LARP7 Protein p65-telomerase RNA Complex in Telomerase Revealed by Cryo-EM and NMR.
J.Mol.Biol., 435, 2023
5GVB
DownloadVisualize
BU of 5gvb by Molmil
SepB domain of human AND-1
Descriptor: WD repeat and HMG-box DNA-binding protein 1
Authors:Guan, C.C, Li, J.
Deposit date:2016-09-05
Release date:2017-04-19
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:The structure and polymerase-recognition mechanism of the crucial adaptor protein AND-1 in the human replisome.
J. Biol. Chem., 292, 2017
5GTT
DownloadVisualize
BU of 5gtt by Molmil
Crystal structure of C. perfringens iota-like enterotoxin CPILE-a
Descriptor: 1,2-ETHANEDIOL, Binary enterotoxin of Clostridium perfringens component a
Authors:Toniti, W, Yoshida, T, Tsurumura, T, Irikura, D, Tsuge, H.
Deposit date:2016-08-23
Release date:2017-03-01
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.011 Å)
Cite:Crystal structure and structure-based mutagenesis of actin-specific ADP-ribosylating toxin CPILE-a as novel enterotoxin
PLoS ONE, 12, 2017
8PE2
DownloadVisualize
BU of 8pe2 by Molmil
Crystal structure of Gel4 in complex with Nanobody 3
Descriptor: 1,3-beta-glucanosyltransferase, 2-acetamido-2-deoxy-beta-D-glucopyranose, Nanobody 3, ...
Authors:Macias-Leon, J, Redrado-Hernandez, S, Castro-Lopez, J, Sanz, A.B, Arias, M, Farkas, V, Vincke, C, Muyldermans, S, Pardo, J, Arroyo, J, Galvez, E, Hurtado-Guerrero, R.
Deposit date:2023-06-13
Release date:2024-06-19
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Broad Protection against Invasive Fungal Disease from a Nanobody Targeting the Active Site of Fungal beta-1,3-Glucanosyltransferases.
Angew.Chem.Int.Ed.Engl., 63, 2024
6P89
DownloadVisualize
BU of 6p89 by Molmil
E.coli LpxD in complex with compound 7
Descriptor: 3-hydroxy-7,7-dimethyl-2-phenyl-4-(thiophen-2-yl)-2,6,7,8-tetrahydro-5H-pyrazolo[3,4-b]quinolin-5-one, MAGNESIUM ION, N-(2,3-dihydro-1,4-benzodioxin-6-yl)-2-(8-methyl[1]benzopyrano[4,3-c]pyrazol-1(4H)-yl)acetamide, ...
Authors:Ma, X, Shia, S.
Deposit date:2019-06-06
Release date:2019-08-28
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural and Biological Basis of Small Molecule Inhibition ofEscherichia coliLpxD Acyltransferase Essential for Lipopolysaccharide Biosynthesis.
Acs Infect Dis., 6, 2020
5DXZ
DownloadVisualize
BU of 5dxz by Molmil
Crystal of AmtR from Corynebacterium glutamicum
Descriptor: SULFATE ION, TetR family transcriptional regulator
Authors:Palanca, C, Rubio, V.
Deposit date:2015-09-24
Release date:2016-01-13
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structure of AmtR, the global nitrogen regulator of Corynebacterium glutamicum, in free and DNA-bound forms.
Febs J., 283, 2016
6CT8
DownloadVisualize
BU of 6ct8 by Molmil
Selenomethionine structure of N-truncated R2-type pyocin tail fiber at 2.6 angstrom resolution
Descriptor: NICKEL (II) ION, R2-type pyocin
Authors:Salazar, A.J, Sherekar, M, Saccettini, J.C.
Deposit date:2018-03-22
Release date:2019-02-20
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.62 Å)
Cite:R pyocin tail fiber structure reveals a receptor-binding domain with a lectin fold.
PLoS ONE, 14, 2019
3ZH9
DownloadVisualize
BU of 3zh9 by Molmil
Bacillus subtilis DNA clamp loader delta protein (YqeN)
Descriptor: DELTA, GLYCEROL, SULFATE ION
Authors:Suwannachart, C, Sedelnikova, S, Soultanas, P, Oldham, N.J, Rafferty, J.B.
Deposit date:2012-12-20
Release date:2013-04-03
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Insights Into the Structure and Assembly of the Bacillus Subtilis Clamp-Loader Complex and its Interaction with the Replicative Helicase.
Nucleic Acids Res., 41, 2013
8FQO
DownloadVisualize
BU of 8fqo by Molmil
ADC-33 in complex with boronic acid transition state inhibitor MB076
Descriptor: 1-[(2R)-2-{2-[(5-amino-1,3,4-thiadiazol-2-yl)sulfanyl]acetamido}-2-boronoethyl]-1H-1,2,3-triazole-4-carboxylic acid, Beta-lactamase, PHOSPHATE ION
Authors:Powers, R.A, Wallar, B.J, June, C.M, Fish, E.R.
Deposit date:2023-01-06
Release date:2023-07-05
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Synthesis of a Novel Boronic Acid Transition State Inhibitor, MB076: A Heterocyclic Triazole Effectively Inhibits Acinetobacter -Derived Cephalosporinase Variants with an Expanded-Substrate Spectrum.
J.Med.Chem., 66, 2023
8FQT
DownloadVisualize
BU of 8fqt by Molmil
Apo ADC-219 beta-lactamase
Descriptor: Beta-lactamase, PHOSPHATE ION
Authors:Powers, R.A, Wallar, B.J, June, C.M, Maurer, O.L.
Deposit date:2023-01-06
Release date:2023-07-05
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Synthesis of a Novel Boronic Acid Transition State Inhibitor, MB076: A Heterocyclic Triazole Effectively Inhibits Acinetobacter -Derived Cephalosporinase Variants with an Expanded-Substrate Spectrum.
J.Med.Chem., 66, 2023
8FQN
DownloadVisualize
BU of 8fqn by Molmil
apo ADC-33 beta-lactamase
Descriptor: Beta-lactamase, GLYCINE, PHOSPHATE ION
Authors:Powers, R.A, Wallar, B.J, June, C.M, Fish, E.R.
Deposit date:2023-01-06
Release date:2023-07-05
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.256 Å)
Cite:Synthesis of a Novel Boronic Acid Transition State Inhibitor, MB076: A Heterocyclic Triazole Effectively Inhibits Acinetobacter -Derived Cephalosporinase Variants with an Expanded-Substrate Spectrum.
J.Med.Chem., 66, 2023
8FQW
DownloadVisualize
BU of 8fqw by Molmil
ADC-30 in complex with boronic acid transition state inhibitor MB076
Descriptor: 1-[(2R)-2-{2-[(5-amino-1,3,4-thiadiazol-2-yl)sulfanyl]acetamido}-2-boronoethyl]-1H-1,2,3-triazole-4-carboxylic acid, Beta-lactamase, DIMETHYL SULFOXIDE, ...
Authors:Powers, R.A, Wallar, B.J, June, C.M, Ruiz, V.J.
Deposit date:2023-01-06
Release date:2023-07-05
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Synthesis of a Novel Boronic Acid Transition State Inhibitor, MB076: A Heterocyclic Triazole Effectively Inhibits Acinetobacter -Derived Cephalosporinase Variants with an Expanded-Substrate Spectrum.
J.Med.Chem., 66, 2023

238582

건을2025-07-09부터공개중

PDB statisticsPDBj update infoContact PDBjnumon