PDB: 217477 resultsInfo pagesStatus searchChemie searchBIRD

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9EOU	Crystal Structure of the b1b2 domains from Human Neuropilin-1 in complex with a peptide. Descriptor: Neuropilin-1, Osteopontin Authors: Caing-Carlsson, R, Duelli, A, Walse, B. Deposit date: 2024-03-15 Release date: 2024-06-26 Method: X-RAY DIFFRACTION (1.55 Å) Cite: Identification of an osteopontin-derived peptide that binds neuropilin-1 and activates vascular repair responses and angiogenesis. Pharmacol Res, 205, 2024
9ENQ	HSV-1 DNA polymerase-processivity factor complex in exonuclease state active site with 1-bp DNA mismatch Descriptor: CALCIUM ION, DNA (46-MER), DNA (67-MER), ... Authors: Gustavsson, E, Grunewald, K, Elias, P, Hallberg, B.M. Deposit date: 2024-03-13 Release date: 2024-05-29 Last modified: 2024-07-17 Method: ELECTRON MICROSCOPY (2.12 Å) Cite: Dynamics of the Herpes simplex virus DNA polymerase holoenzyme during DNA synthesis and proof-reading revealed by Cryo-EM. Nucleic Acids Res., 52, 2024
9EV6	Corynebacterium glutamicum pyruvate:quinone oxidoreductase (PQO), C-terminal truncated construct Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, MAGNESIUM ION, THIAMINE DIPHOSPHATE, ... Authors: Da Silva Lameira, C, Muenssinger, S, Yang, L, Eikmanns, B.J, Bellinzoni, M. Deposit date: 2024-03-28 Release date: 2024-08-07 Method: X-RAY DIFFRACTION (1.891 Å) Cite: Corynebacterium glutamicum pyruvate:quinone oxidoreductase: an enigmatic metabolic enzyme with unusual structural features. Febs J., 2024
9FEB	Short-chain dehydrogenase/reductase (SDR) from Thermus caliditerrae in complex with NADP Descriptor: MAGNESIUM ION, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, SDR family oxidoreductase Authors: Kapur, B, Nar, H. Deposit date: 2024-05-17 Release date: 2024-06-26 Method: X-RAY DIFFRACTION (1.698 Å) Cite: In silico enzyme screening identifies an SDR ketoreductase from Thermus caliditerrae as an attractive biocatalyst and promising candidate for protein engineering Front Chem Biol, 2024
9CJ0	The High-Resolution Structure of a Variable Lymphocyte Receptor from Petrozymon marinus Capable of Binding to the Brain Extracellular Matrix Descriptor: 3-[4-(2-HYDROXYETHYL)PIPERAZIN-1-YL]PROPANE-1-SULFONIC ACID, SULFATE ION, Variable Lymphocyte Receptor Authors: Appelt, E.A, Thoden, J.B, Shusta, E.V, Holden, H.M. Deposit date: 2024-07-05 Release date: 2024-07-31 Method: X-RAY DIFFRACTION (1.3 Å) Cite: The High-Resolution Structure of a Variable Lymphocyte Receptor from Petrozymon marinus Capable of Binding to the Brain Extracellular Matrix To Be Published
7BCJ	Solution Structure of RoxP Descriptor: Radical Oxygenase of Propionibacterium acnes Authors: Stoedkilde, K, Nielsen, J.T, Mulder, F.A.A, Andersen, C.B.F. Deposit date: 2020-12-19 Release date: 2021-11-24 Last modified: 2023-06-14 Method: SOLUTION NMR Cite: Solution Structure of the Cutibacterium acnes -Specific Protein RoxP and Insights Into Its Antioxidant Activity. Front Cell Infect Microbiol, 12, 2022
1R36	NMR-based structure of autoinhibited murine Ets-1 deltaN301 Descriptor: C-ets-1 protein Authors: Lee, G.M, Donaldson, L.W, Pufall, M.A, Kang, H.-S, Pot, I, Graves, B.J, McIntosh, L.P. Deposit date: 2003-09-30 Release date: 2004-11-09 Last modified: 2024-05-08 Method: SOLUTION NMR Cite: The Structural and Dynamic Basis of Ets-1 DNA Binding Autoinhibition J.Biol.Chem., 280, 2005
7CLV	Solution structure of mitochondrial Tim23 channel in complex with a signaling peptide Descriptor: COX4 isoform 1, TIM23 isoform 1 Authors: Zhou, S, Ruan, M.S, Li, Y.Y, Yang, J, Richter, C, Schwalbe, H, Shen, B, Wang, J.F. Deposit date: 2020-07-22 Release date: 2020-12-30 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Solution structure of the voltage-gated Tim23 channel in complex with a mitochondrial presequence peptide. Cell Res., 31, 2021
1R1B	EPRS SECOND REPEATED ELEMENT, NMR, MINIMIZED AVERAGE STRUCTURE Descriptor: TRNA SYNTHETASE Authors: Cahuzac, B, Berthonneau, E, Birlirakis, N, Mirande, M, Guittet, E. Deposit date: 1998-12-15 Release date: 1999-12-15 Last modified: 2023-12-27 Method: SOLUTION NMR Cite: A recurrent RNA-binding domain is appended to eukaryotic aminoacyl-tRNA synthetases. EMBO J., 19, 2000
1RIP	RIBOSOMAL PROTEIN S17: CHARACTERIZATION OF THE THREE-DIMENSIONAL STRUCTURE BY 1H-AND 15N-NMR Descriptor: RIBOSOMAL PROTEIN S17 Authors: Golden, B.L, Hoffman, D.W, Ramakrishnan, V, White, S.W. Deposit date: 1993-08-17 Release date: 1993-10-31 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: Ribosomal protein S17: characterization of the three-dimensional structure by 1H and 15N NMR. Biochemistry, 32, 1993
1R5E	Solution structure of the folded core of Pseudomonas syringae effector protein, AvrPto Descriptor: avirulence protein Authors: Wulf, J, Pascuzzi, P.E, Martin, G.B, Nicholson, L.K. Deposit date: 2003-10-10 Release date: 2004-10-19 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: The solution structure of type III effector protein AvrPto reveals conformational and dynamic features important for plant pathogenesis. STRUCTURE, 12, 2004
1RJT	NMR Structure of CXC Chemokine CXCL11/ITAC Descriptor: Small inducible cytokine B11 Authors: Booth, V, Clark-Lewis, I, Sykes, B.D. Deposit date: 2003-11-20 Release date: 2004-04-13 Last modified: 2022-03-02 Method: SOLUTION NMR Cite: NMR structure of CXCR3 binding chemokine CXCL11 (ITAC). Protein Sci., 13, 2004
1RQM	SOLUTION STRUCTURE OF THE K18G/R82E ALICYCLOBACILLUS ACIDOCALDARIUS THIOREDOXIN MUTANT Descriptor: Thioredoxin Authors: Leone, M, Di Lello, P, Ohlenschlager, O, Pedone, E.M, Bartolucci, S, Rossi, M, Di Blasio, B, Pedone, C, Saviano, M, Isernia, C, Fattorusso, R. Deposit date: 2003-12-05 Release date: 2004-06-22 Last modified: 2021-10-27 Method: SOLUTION NMR Cite: Solution Structure and Backbone Dynamics of the K18G/R82E Alicyclobacillus acidocaldarius Thioredoxin Mutant: A Molecular Analysis of Its Reduced Thermal Stability. Biochemistry, 43, 2004
7CM2	The Crystal Structure of human USP7 USP domain from Biortus Descriptor: GLYCEROL, Ubiquitin carboxyl-terminal hydrolase 7 Authors: Wang, F, Cheng, W, Lv, Z, Lin, D, Zhu, B, Miao, Q, Bao, X, Shang, H. Deposit date: 2020-07-24 Release date: 2020-08-05 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (2.25 Å) Cite: The Crystal Structure of human USP7 USP domain from Biortus. To Be Published
1RFL	NMR data driven structural model of G-domain of MnmE protein Descriptor: Probable tRNA modification GTPase trmE Authors: Monleon, D, Esteve, V, Martinez-Vicente, M, Yim, L, Armengod, M.E, Celda, B. Deposit date: 2003-11-10 Release date: 2003-12-02 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: Structural insights into the GTPase domain of Escherichia coli MnmE protein. Proteins, 66, 2007
7CVX	Crystal structure of Catechol o-methyl transferase (COMT) from Niastella koreensis Descriptor: 3,4-DIHYDROXYBENZOIC ACID, GLYCEROL, MAGNESIUM ION, ... Authors: Kim, B, Lee, S.H, Kim, K.-J. Deposit date: 2020-08-27 Release date: 2020-11-18 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Structural and Biochemical analysis of FumaraseC from Mannheimia succiniciproducens To Be Published
1R9V	NMR Structure of a D,L-Alternating Dodecamer of Norleucine Descriptor: BOC-(D-NLE-L-NLE)4-D-NLE(METHYL)-L-NLE-D-NLE-L-NLE METHYL ESTER Authors: Navarro, E, Celda, B. Deposit date: 2003-10-31 Release date: 2003-12-02 Last modified: 2023-11-15 Method: SOLUTION NMR Cite: Solution NMR Structure of a D,L-Alternating Oligonorleucine as a Model of Beta-Helix Biopolymers, 59, 2001
7CK9	Crystal structure of Doxorubicin loaded human ferritin heavy chain Descriptor: CHLORIDE ION, Ferritin heavy chain, GLYCEROL, ... Authors: Chen, X, Jiang, B, Yan, X, Fan, K. Deposit date: 2020-07-16 Release date: 2021-05-26 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (1.602 Å) Cite: A natural drug entry channel in the ferritin nanocage. Nano Today, 35, 2020
7CCM	Crystal structure of selenomethionine-derived human BFK Descriptor: Bcl-2-like protein 15 Authors: Oh, E.K, Jang, D.M, Han, B.W. Deposit date: 2020-06-17 Release date: 2021-06-23 Method: X-RAY DIFFRACTION (2.45 Å) Cite: Structural analyses on human BFK, a Novel BCL-2 Family Member. To Be Published
7CCL	Crystal structure of human BFK Descriptor: Bcl-2-like protein 15 Authors: Jang, D.M, Oh, E.K, Han, B.W. Deposit date: 2020-06-17 Release date: 2021-06-23 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (2.7 Å) Cite: Structural analyses on human BFK, a Novel BCL-2 Family Member. To Be Published
7CFE	Crystal structure of RsmG methyltransferase of M. tuberculosis Descriptor: ISOPROPYL ALCOHOL, PHOSPHATE ION, Ribosomal RNA small subunit methyltransferase G, ... Authors: Bijpuria, S, Maurya, A, Kumar, P, Sharma, R, Taneja, B. Deposit date: 2020-06-25 Release date: 2021-06-30 Last modified: 2024-03-27 Method: X-RAY DIFFRACTION (2.02 Å) Cite: Crystal structure of RsmG methyltransferase of M. tuberculosis To Be Published
7CLF	PigF with SAH Descriptor: ACETATE ION, Methyltransferase domain-containing protein, S-ADENOSYL-L-HOMOCYSTEINE Authors: Qiu, S, Xu, D, Han, N, Sun, B, Ran, T, Wang, W. Deposit date: 2020-07-20 Release date: 2021-07-28 Last modified: 2024-05-29 Method: X-RAY DIFFRACTION (1.982 Å) Cite: Crystal structures of PigF, an O-methyltransferase involved in the prodigiosin synthetic pathway, reveal an induced-fit substrate-recognition mechanism. Iucrj, 9, 2022
7CLU	PigF with SAH Descriptor: ACETATE ION, GLYCEROL, Methyltransferase domain-containing protein Authors: Qiu, S, Xu, D, Han, N, Sun, B, Ran, T, Wang, W. Deposit date: 2020-07-22 Release date: 2021-07-28 Last modified: 2024-05-29 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Crystal structures of PigF, an O-methyltransferase involved in the prodigiosin synthetic pathway, reveal an induced-fit substrate-recognition mechanism. Iucrj, 9, 2022
7CTD	Crystal structure of apo form of alpha-glucuronidase (TM0752) from Thermotoga maritima Descriptor: Alpha-glucosidase, putative Authors: Manoj, N, Mohapatra, B.S. Deposit date: 2020-08-18 Release date: 2021-09-01 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (2.15 Å) Cite: Structural basis of catalysis and substrate recognition by the NAD(H)-dependent alpha-d-glucuronidase from the glycoside hydrolase family 4. Biochem.J., 478, 2021
7CVU	Crystal structure of Catechol o-methyl transferase (COMT) from Niastella koreensis Descriptor: GLYCEROL, O-methyltransferase family 3 Authors: Kim, B, Lee, S.H, Kim, K.-J. Deposit date: 2020-08-27 Release date: 2021-09-01 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (1.75 Å) Cite: Structural and Biochemical analysis of FumaraseC from Mannheimia succiniciproducens To Be Published

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