PDB: 2103 resultsInfo pagesStatus searchChemie searchBIRD

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4PPK	Crystal structure of eCGP123 T69V variant at pH 7.5 Descriptor: Monomeric Azami Green Authors: Don Paul, C, Traore, D.A.K, Devenish, R.J, Close, D, Bell, T, Bradbury, A, Wilce, M.C.J, Prescott, M. Deposit date: 2014-02-27 Release date: 2015-04-08 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (2 Å) Cite: X-Ray Crystal Structure and Properties of Phanta, a Weakly Fluorescent Photochromic GFP-Like Protein. Plos One, 10, 2015
1G7K	CRYSTAL STRUCTURE OF DSRED, A RED FLUORESCENT PROTEIN FROM DISCOSOMA SP. RED Descriptor: FLUORESCENT PROTEIN FP583 Authors: Yarbrough, D, Wachter, R.M, Kallio, K, Matz, M.V, Remington, S.J. Deposit date: 2000-11-10 Release date: 2000-12-06 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2 Å) Cite: Refined crystal structure of DsRed, a red fluorescent protein from coral, at 2.0-A resolution. Proc.Natl.Acad.Sci.USA, 98, 2001
5WD6	bovine salivary protein form 30b Descriptor: CALCIUM ION, Short palate, lung and nasal epithelium carcinoma-associated protein 2B Authors: Zhang, H, Arcus, V.L. Deposit date: 2017-07-04 Release date: 2018-07-11 Last modified: 2019-07-24 Method: X-RAY DIFFRACTION (2 Å) Cite: The three dimensional structure of Bovine Salivary Protein 30b (BSP30b) and its interaction with specific rumen bacteria. Plos One, 14, 2019
2H8Q	Crystal Structure of a Redshifted Mutant (K83M) of the Red Fluorescent Protein dRFP583/dsRed Descriptor: Red fluorescent protein drFP583 Authors: Yarbrough, C.A, Remington, S.J. Deposit date: 2006-06-07 Release date: 2006-08-22 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2 Å) Cite: Novel Chromophores and Buried Charges Control Color in mFruits(,). Biochemistry, 45, 2006
3HPR	Crystal structure of V148G adenylate kinase from E. coli, in complex with Ap5A Descriptor: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE Authors: Hilser, V.J, Travis, T.P, Bolen, D.W. Deposit date: 2009-06-04 Release date: 2009-11-03 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2 Å) Cite: Rational modulation of conformational fluctuations in adenylate kinase reveals a local unfolding mechanism for allostery and functional adaptation in proteins. Proc.Natl.Acad.Sci.USA, 106, 2009
2EMD	GREEN FLUORESCENT PROTEIN FROM AEQUOREA VICTORIA, MUTANT Descriptor: GREEN FLUORESCENT PROTEIN Authors: Palm, G, Zdanov, A, Wlodawer, A. Deposit date: 1997-03-31 Release date: 1997-08-20 Last modified: 2023-08-09 Method: X-RAY DIFFRACTION (2 Å) Cite: The structural basis for spectral variations in green fluorescent protein. Nat.Struct.Biol., 4, 1997
1Z1P	Y66L variant of Enhanced Green Fluorescent Protein with 412-nm Absorbing Chromophore Descriptor: green fluorescent protein Authors: Rosenow, M.A, Patel, H.N, Wachter, R.M. Deposit date: 2005-03-04 Release date: 2005-06-21 Last modified: 2024-07-10 Method: X-RAY DIFFRACTION (2 Å) Cite: Oxidative Chemistry in the GFP Active Site Leads to Covalent Cross-Linking of a Modified Leucine Side Chain with a Histidine Imidazole: Implications for the Mechanism of Chromophore Formation. Biochemistry, 44, 2005
1F3T	CRYSTAL STRUCTURE OF TRYPANOSOMA BRUCEI ORNITHINE DECARBOXYLASE (ODC) COMPLEXED WITH PUTRESCINE, ODC'S REACTION PRODUCT. Descriptor: 1,4-DIAMINOBUTANE, ORNITHINE DECARBOXYLASE, PYRIDOXAL-5'-PHOSPHATE Authors: Jackson, L.K, Brooks, H.B, Osterman, A.L, Goldsmith, E.J, Phillips, M.A. Deposit date: 2000-06-06 Release date: 2000-11-22 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (2 Å) Cite: Altering the reaction specificity of eukaryotic ornithine decarboxylase. Biochemistry, 39, 2000
1GP1	THE REFINED STRUCTURE OF THE SELENOENZYME GLUTATHIONE PEROXIDASE AT 0.2-NM RESOLUTION Descriptor: GLUTATHIONE PEROXIDASE Authors: Epp, O, Ladenstein, R. Deposit date: 1985-06-11 Release date: 1985-11-08 Last modified: 2023-07-26 Method: X-RAY DIFFRACTION (2 Å) Cite: The refined structure of the selenoenzyme glutathione peroxidase at 0.2-nm resolution. Eur.J.Biochem., 133, 1983
2Q57	X-ray structure of Cerulean GFP: A tryptophan-based chromophore useful for fluorescence lifetime imaging Descriptor: Cerulean Green fluorescent protein Authors: Malo, G.D. Deposit date: 2007-05-31 Release date: 2007-11-27 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2 Å) Cite: X-ray structure of Cerulean GFP: a tryptophan-based chromophore useful for fluorescence lifetime imaging. Biochemistry, 46, 2007
4N0I	Crystal structure of S. cerevisiae mitochondrial GatFAB in complex with glutamine Descriptor: GLUTAMINE, Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial, ... Authors: Araiso, Y, Ishitani, R, Nureki, O. Deposit date: 2013-10-02 Release date: 2014-04-16 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (2.001 Å) Cite: Crystal structure of Saccharomyces cerevisiae mitochondrial GatFAB reveals a novel subunit assembly in tRNA-dependent amidotransferases Nucleic Acids Res., 42, 2014
4IKW	Crystal structure of peptide transporter POT in complex with sulfate Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Di-tripeptide ABC transporter (Permease), OLEIC ACID, ... Authors: Doki, S, Kato, H.E, Ishitani, R, Nureki, O. Deposit date: 2012-12-28 Release date: 2013-07-10 Last modified: 2024-05-29 Method: X-RAY DIFFRACTION (2.004 Å) Cite: Structural basis for dynamic mechanism of proton-coupled symport by the peptide transporter POT. Proc.Natl.Acad.Sci.USA, 110, 2013
4NP6	Crystal Structure of Adenylate Kinase from Vibrio cholerae O1 biovar eltor Descriptor: Adenylate kinase Authors: Kim, Y, Zhou, M, Grimshaw, S, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID) Deposit date: 2013-11-20 Release date: 2013-12-18 Last modified: 2017-11-22 Method: X-RAY DIFFRACTION (2.004 Å) Cite: Crystal Structure of Adenylate Kinase from Vibrio cholerae O1 biovar eltor To be Published
4IK3	High resolution structure of GCaMP3 at pH 8.5 Descriptor: CALCIUM ION, RCaMP, Green fluorescent protein Authors: Chen, Y, Song, X, Miao, L, Zhu, Y, Ji, G. Deposit date: 2012-12-25 Release date: 2014-01-29 Last modified: 2017-06-21 Method: X-RAY DIFFRACTION (2.007 Å) Cite: Structural insight into enhanced calcium indicator GCaMP3 and GCaMPJ to promote further improvement. Protein Cell, 4, 2013
3D8H	Crystal structure of phosphoglycerate mutase from Cryptosporidium parvum, cgd7_4270 Descriptor: Glycolytic phosphoglycerate mutase Authors: Wernimont, A.K, Lew, J, Wasney, G, Alam, Z, Kozieradzki, I, Cossar, D, Schapiro, M, Bochkarev, A, Arrowsmith, C.H, Bountra, C, Wilkstrom, M, Edwards, A.M, Hui, R, Artz, J.D, Hills, T, Structural Genomics Consortium (SGC) Deposit date: 2008-05-23 Release date: 2008-07-15 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (2.01 Å) Cite: Characterization of a new phosphatase from Plasmodium. Mol.Biochem.Parasitol., 179, 2011
4ZFS	Phototoxic Fluorescent Protein KillerOrange Descriptor: KillerOrange Authors: Pletneva, N.V, Pletnev, V.Z, Pletnev, S. Deposit date: 2015-04-21 Release date: 2015-12-23 Last modified: 2024-07-10 Method: X-RAY DIFFRACTION (2.01 Å) Cite: Crystal Structure of Phototoxic Orange Fluorescent Proteins with a Tryptophan-Based Chromophore. Plos One, 10, 2015
4K46	Crystal Structure of Adenylate Kinase from Photobacterium profundum Descriptor: ADENOSINE MONOPHOSPHATE, ADENOSINE-5'-DIPHOSPHATE, Adenylate kinase, ... Authors: Cho, Y.-J, Kerns, S.J, Kern, D. Deposit date: 2013-04-12 Release date: 2014-07-16 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (2.01 Å) Cite: Alike but Different: Adenylate kinases from E. Coli, Aquifex, and P. profundum To be Published
4IK4	High resolution structure of GCaMP3 at pH 5.0 Descriptor: CALCIUM ION, RCaMP, Green fluorescent protein Authors: Chen, Y, Song, X, Miao, L, Zhu, Y, Ji, G. Deposit date: 2012-12-25 Release date: 2014-02-05 Last modified: 2017-06-21 Method: X-RAY DIFFRACTION (2.01 Å) Cite: Structural insight into enhanced calcium indicator GCaMP3 and GCaMPJ to promote further improvement. Protein Cell, 4, 2013
4XBI	Structure Of A Malarial Protein Involved in Proteostasis Descriptor: ClpB protein, putative,Green fluorescent protein, SULFATE ION Authors: Egea, P.F, Ah Young, A.P, Cascio, D. Deposit date: 2014-12-17 Release date: 2015-07-29 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2.013 Å) Cite: Structural mapping of the ClpB ATPases of Plasmodium falciparum: Targeting protein folding and secretion for antimalarial drug design. Protein Sci., 24, 2015
8AM4	Cl-rsEGFP2 Long Wavelength Structure Descriptor: Green fluorescent protein Authors: Orr, C.M, Fadini, A, van Thor, J. Deposit date: 2022-08-02 Release date: 2023-08-02 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (2.02 Å) Cite: Serial Femtosecond Crystallography Reveals that Photoactivation in a Fluorescent Protein Proceeds via the Hula Twist Mechanism. J.Am.Chem.Soc., 2023
3CMI	Crystal structure of glutathione-dependent phospholipid peroxidase Hyr1 from the yeast Saccharomyces cerevisiae Descriptor: Peroxiredoxin HYR1 Authors: Zhang, W.J.Z, He, Y.X, Yu, J, Zhou, C.Z. Deposit date: 2008-03-21 Release date: 2008-09-16 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.02 Å) Cite: Crystal structure of glutathione-dependent phospholipid peroxidase Hyr1 from the yeast Saccharomyces cerevisiae Proteins, 73, 2008
6A62	Placental protein 13/galectin-13 variant R53HH57RD33G with Lactose Descriptor: Galactoside-binding soluble lectin 13, beta-D-galactopyranose-(1-4)-beta-D-glucopyranose Authors: Su, J. Deposit date: 2018-06-26 Release date: 2018-12-26 Last modified: 2020-07-29 Method: X-RAY DIFFRACTION (2.03 Å) Cite: Resetting the ligand binding site of placental protein 13/galectin-13 recovers its ability to bind lactose Biosci. Rep., 38, 2018
2NTK	Crystal structure of PurO/IMP from Methanothermobacter thermoautotrophicus Descriptor: IMP cyclohydrolase, INOSINIC ACID Authors: Kang, Y.N, Tran, A, White, R.H, Ealick, S.E. Deposit date: 2006-11-07 Release date: 2007-04-24 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (2.03 Å) Cite: A novel function for the N-terminal nucleophile hydrolase fold demonstrated by the structure of an archaeal inosine monophosphate cyclohydrolase. Biochemistry, 46, 2007
6LZ2	Crystal structure of a thermostable green fluorescent protein (TGP) with a synthetic nanobody (Sb44) Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETATE ION, GLYCEROL, ... Authors: Cai, H, Yao, H, Li, T, Hutter, C, Tang, Y, Li, Y, Seeger, M, Li, D. Deposit date: 2020-02-17 Release date: 2020-12-23 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (2.03 Å) Cite: An improved fluorescent tag and its nanobodies for membrane protein expression, stability assay, and purification. Commun Biol, 3, 2020
5BT0	Switching GFP fluorescence using genetically encoded phenyl azide chemistry through two different non-native post-translational modifications routes at the same position. Descriptor: Green fluorescent protein, SULFATE ION Authors: Hartley, A.M, Worthy, H.L, Reddington, S.C, Rizkallah, P.J, Jones, D.D. Deposit date: 2015-06-02 Release date: 2016-07-13 Last modified: 2017-05-10 Method: X-RAY DIFFRACTION (2.03 Å) Cite: Molecular basis for functional switching of GFP by two disparate non-native post-translational modifications of a phenyl azide reaction handle. Chem Sci, 7, 2016

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