PDB: 5591 resultsInfo pagesStatus searchChemie searchBIRD

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8Y9C	De novo design mini-binder in complex with TcdB4 Descriptor: De novo design Minibinder, Toxin B, ZINC ION Authors: Lv, X.C, Lu, P.L. Deposit date: 2024-02-06 Release date: 2024-08-28 Method: ELECTRON MICROSCOPY (3 Å) Cite: De novo design mini-binder in complex with TcdB4 To Be Published
7OT8	DeNovoTIM6-SB, a de novo designed TIM barrel with a salt-bridge cluster (crystal form 2) Descriptor: DeNovoTIM6-SB, SULFATE ION Authors: Kordes, S, Romero-Romero, S, Hocker, B. Deposit date: 2021-06-09 Release date: 2021-12-15 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (2.22 Å) Cite: A newly introduced salt bridge cluster improves structural and biophysical properties of de novo TIM barrels. Protein Sci., 31, 2022
2A3D	SOLUTION STRUCTURE OF A DE NOVO DESIGNED SINGLE CHAIN THREE-HELIX BUNDLE (A3D) Descriptor: PROTEIN (DE NOVO THREE-HELIX BUNDLE) Authors: Walsh, S.T.R, Cheng, H, Bryson, J.W, Roder, H, Degrado, W.F. Deposit date: 1999-04-01 Release date: 1999-05-05 Last modified: 2023-12-27 Method: SOLUTION NMR Cite: Solution structure and dynamics of a de novo designed three-helix bundle protein. Proc.Natl.Acad.Sci.USA, 96, 1999
6VTW	De novo protein design enables the precise induction of RSV-neutralizing antibodies Descriptor: 101F Fab Heavy Chain, 101F Fab Light Chain, S4_2.45 Authors: Jardetzky, T, Correia, B. Deposit date: 2020-02-13 Release date: 2020-04-15 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (2.6 Å) Cite: De novo protein design enables the precise induction of RSV-neutralizing antibodies. Science, 368, 2020
7RMY	De Novo designed tunable protein pockets, D_3-337 Descriptor: De Novo designed tunable homodimer, D_3-337 Authors: Bera, A.K, Hicks, D.R, Kang, A, Sankaran, B, Baker, D. Deposit date: 2021-07-28 Release date: 2022-08-03 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (3.17 Å) Cite: De novo design of protein homodimers containing tunable symmetric protein pockets. Proc.Natl.Acad.Sci.USA, 119, 2022
8H7E	Crystal structure of a de novo enzyme, ferric enterobactin esterase Syn-F4 (K4T) at 2.0 angstrom resolution Descriptor: ACETATE ION, De novo ferric enterobactin esterase Syn-F4 Authors: Kurihara, K, Umezawa, K, Donnelly, A.E, Hecht, M.H, Arai, R. Deposit date: 2022-10-19 Release date: 2023-09-20 Method: X-RAY DIFFRACTION (2 Å) Cite: Crystal structure and activity of a de novo enzyme, ferric enterobactin esterase Syn-F4. Proc.Natl.Acad.Sci.USA, 120, 2023
8H7C	Crystal structure of a de novo enzyme, ferric enterobactin esterase Syn-F4 (K4T) - Pt derivative Descriptor: ACETATE ION, CHLORIDE ION, De novo ferric enterobactin esterase Syn-F4, ... Authors: Kurihara, K, Umezawa, K, Donnelly, A.E, Hecht, M.H, Arai, R. Deposit date: 2022-10-19 Release date: 2023-09-20 Method: X-RAY DIFFRACTION (2.15 Å) Cite: Crystal structure and activity of a de novo enzyme, ferric enterobactin esterase Syn-F4. Proc.Natl.Acad.Sci.USA, 120, 2023
8H7D	Crystal structure of a de novo enzyme, ferric enterobactin esterase Syn-F4 (K4T) Descriptor: ACETATE ION, De novo ferric enterobactin esterase Syn-F4 Authors: Kurihara, K, Umezawa, K, Donnelly, A.E, Hecht, M.H, Arai, R. Deposit date: 2022-10-19 Release date: 2023-09-20 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Crystal structure and activity of a de novo enzyme, ferric enterobactin esterase Syn-F4. Proc.Natl.Acad.Sci.USA, 120, 2023
5JG9	Crystal structure of the de novo mini protein gEHEE_06 Descriptor: CHLORIDE ION, GLYCEROL, de novo design, ... Authors: Rupert, P.B, Johnsen, W.A. Deposit date: 2016-04-19 Release date: 2016-09-28 Last modified: 2016-11-02 Method: X-RAY DIFFRACTION (2.09 Å) Cite: Accurate de novo design of hyperstable constrained peptides. Nature, 538, 2016
6DS9	Elongated version of a de novo designed three helix bundle structure (GRa3D) Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, THIOCYANATE ION, ... Authors: Koebke, K.J, Ruckthong, L.R, Meagher, J.L, Stuckey, J.A, Pecoraro, V.L. Deposit date: 2018-06-13 Release date: 2018-10-03 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (1.34 Å) Cite: Clarifying the Copper Coordination Environment in a de Novo Designed Red Copper Protein. Inorg Chem, 57, 2018
8K7O	De novo design protein -T03 Descriptor: De novo design protein Authors: Wang, S, Liu, Y. Deposit date: 2023-07-27 Release date: 2024-07-31 Method: X-RAY DIFFRACTION (1.7 Å) Cite: De novo design protein -T03 To Be Published
8K7M	De novo design protein -T01 Descriptor: De novo design protein Authors: Wang, S, Liu, Y. Deposit date: 2023-07-26 Release date: 2024-07-31 Method: X-RAY DIFFRACTION (2.7 Å) Cite: De novo design protein -T01 To Be Published
8K7Z	De novo design protein -N1 Descriptor: De novo design protein Authors: Wang, S, Liu, Y. Deposit date: 2023-07-27 Release date: 2024-07-31 Method: X-RAY DIFFRACTION (1.3 Å) Cite: De novo design protein -N1 To Be Published
8K8G	De novo design protein -N9 Descriptor: De novo design protein Authors: Wang, S, Liu, Y. Deposit date: 2023-07-29 Release date: 2024-08-07 Method: X-RAY DIFFRACTION (1.35 Å) Cite: De novo design protein -N9 To Be Published
8K8F	De novo design protein -N7 Descriptor: De novo design protein N7, GLYCEROL Authors: Wang, S, Liu, Y. Deposit date: 2023-07-29 Release date: 2024-07-31 Method: X-RAY DIFFRACTION (1.45 Å) Cite: De novo design protein -N7 To Be Published
8KAC	De novo design protein -NX1 Descriptor: De novo design protein -NX1 Authors: Wang, S, Liu, Y. Deposit date: 2023-08-02 Release date: 2024-08-07 Method: X-RAY DIFFRACTION (1.75 Å) Cite: De novo design protein -NX1 To Be Published
8KC0	De novo design protein -NB8 Descriptor: De novo design protein -NB8 Authors: Wang, S, Liu, Y. Deposit date: 2023-08-05 Release date: 2024-08-07 Method: X-RAY DIFFRACTION (2.1 Å) Cite: De novo design protein -NB8 To Be Published
8K8I	De novo design protein -N14 Descriptor: De novo design protein -N14 Authors: Wang, S, Liu, Y. Deposit date: 2023-07-30 Release date: 2024-07-31 Method: X-RAY DIFFRACTION (2.1 Å) Cite: De novo design protein -N14 To Be Published
8KC4	De novo design protein -NA05 Descriptor: De novo design protein -NA05 Authors: Wang, S, Liu, Y. Deposit date: 2023-08-06 Release date: 2024-08-07 Method: X-RAY DIFFRACTION (2.2 Å) Cite: De novo design protein -NA05 To Be Published
8KA7	De novo design protein -NB7 Descriptor: De novo design protein -NB7 Authors: Wang, S, Liu, Y. Deposit date: 2023-08-02 Release date: 2024-08-07 Method: X-RAY DIFFRACTION (1.85 Å) Cite: De novo design protein -NB7 To Be Published
8KC5	De novo design protein -T09 Descriptor: De novo design protein -T09 Authors: Wang, S, Liu, Y. Deposit date: 2023-08-06 Release date: 2024-08-07 Method: X-RAY DIFFRACTION (2.3 Å) Cite: De novo design protein -T09 To Be Published
8KA6	De novo design protein -NA7 Descriptor: De novo design protein -NA7 Authors: Wang, S, Liu, Y. Deposit date: 2023-08-02 Release date: 2024-08-07 Method: X-RAY DIFFRACTION (2.2 Å) Cite: De novo design protein -NA7 To Be Published
8KC8	De novo design protein -T11 Descriptor: De novo design protein -T11 Authors: Wang, S, Liu, Y. Deposit date: 2023-08-06 Release date: 2024-08-07 Method: X-RAY DIFFRACTION (2.65 Å) Cite: De novo design protein -T11 To Be Published
8KC1	De novo design protein -NX5 Descriptor: De novo design protein -NX5 Authors: Wang, S, Liu, Y. Deposit date: 2023-08-05 Release date: 2024-08-07 Method: X-RAY DIFFRACTION (1.8 Å) Cite: De novo design protein -NX5 To Be Published
8KCJ	De novo design protein -N7 Descriptor: De novo design protein -N7, GLYCEROL Authors: Wang, S, Liu, Y. Deposit date: 2023-08-07 Release date: 2024-08-14 Method: X-RAY DIFFRACTION (1.45 Å) Cite: De novo design protein -N7 To Be Published

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