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3GLF	Crystal Structure of the Ecoli Clamp Loader Bound to Primer-Template DNA Descriptor: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, DNA (5'-D(*CP*TP*GP*GP*CP*CP*TP*AP*TP*A)-3'), ... Authors: Simonetta, K.R, Kuriyan, J. Deposit date: 2009-03-12 Release date: 2009-05-26 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (3.388 Å) Cite: The mechanism of ATP-dependent primer-template recognition by a clamp loader complex. Cell(Cambridge,Mass.), 137, 2009
8DK9	Sliding-clamp-DinX peptide Descriptor: ACETYL GROUP, AMINO GROUP, Beta sliding clamp, ... Authors: Kapur, M.K, Gray, O.J, Honzatko, R.H, Nelson, S.N. Deposit date: 2022-07-05 Release date: 2023-01-18 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Interaction of sliding clamp with mycobacterial polymerases To Be Published
6D46	Crystal structure of a DNA polymerase III subunit beta DnaN sliding clamp from Rickettsia typhi str. Wilmington Descriptor: Beta sliding clamp, CHLORIDE ION, TETRAETHYLENE GLYCOL Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID) Deposit date: 2018-04-17 Release date: 2018-05-02 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (2 Å) Cite: Crystal structure of a DNA polymerase III subunit beta DnaN sliding clamp from Rickettsia typhi str. Wilmington To Be Published
7DTA	Solution structure of the C-clamp domain from human HDBP1 in complex with DNA Descriptor: DNA (5'-D(*GP*TP*CP*CP*CP*GP*GP*CP*AP*TP*A)-3'), DNA (5'-D(*TP*AP*TP*GP*CP*CP*GP*GP*GP*AP*C)-3'), SLC2A4 regulator, ... Authors: Duan, B, Xia, B. Deposit date: 2021-01-04 Release date: 2021-07-21 Last modified: 2024-05-01 Method: SOLUTION NMR Cite: Selective Nonmethylated CpG DNA Recognition Mechanism of Cysteine Clamp Domains. J.Am.Chem.Soc., 143, 2021
8GJ1	E. coli clamp loader with open clamp on primed template DNA (form 2) Descriptor: ADENOSINE-5'-DIPHOSPHATE, Beta sliding clamp, DNA polymerase III subunit delta, ... Authors: Oakley, A.J, Xu, Z.-Q, Dixon, N.E. Deposit date: 2023-03-14 Release date: 2024-03-27 Method: ELECTRON MICROSCOPY (3 Å) Cite: Structural characterisation of the complete cycle of sliding clamp loading in E. coli To Be Published
8GIY	E. coli clamp loader with closed clamp Descriptor: Beta sliding clamp, DNA polymerase III subunit delta, DNA polymerase III subunit delta', ... Authors: Oakley, A.J, Xu, Z.-Q, Dixon, N.E. Deposit date: 2023-03-14 Release date: 2024-03-27 Method: ELECTRON MICROSCOPY (3.7 Å) Cite: Structural characterisation of the complete cycle of sliding clamp loading in E. coli To Be Published
8GJ0	E. coli clamp loader with open clamp on primed template DNA (form 1) Descriptor: ADENOSINE-5'-DIPHOSPHATE, Beta sliding clamp, DNA polymerase III subunit delta, ... Authors: Oakley, A.J, Xu, Z.-Q, Dixon, N.E. Deposit date: 2023-03-14 Release date: 2024-03-27 Method: ELECTRON MICROSCOPY (2.9 Å) Cite: Structural characterisation of the complete cycle of sliding clamp loading in E. coli To Be Published
8GIZ	E. coli clamp loader with open clamp Descriptor: Beta sliding clamp, DNA polymerase III subunit delta, DNA polymerase III subunit delta', ... Authors: Oakley, A.J, Xu, Z.-Q, Dixon, N.E. Deposit date: 2023-03-14 Release date: 2024-03-27 Method: ELECTRON MICROSCOPY (2.7 Å) Cite: Structural characterisation of the complete cycle of sliding clamp loading in E. coli To Be Published
8GJ2	E. coli clamp loader with closed clamp on primed template DNA Descriptor: ADENOSINE-5'-DIPHOSPHATE, Beta sliding clamp, DNA polymerase III subunit delta, ... Authors: Oakley, A.J, Xu, Z.-Q, Dixon, N.E. Deposit date: 2023-03-14 Release date: 2024-03-27 Method: ELECTRON MICROSCOPY (2.6 Å) Cite: Structural characterisation of the complete cycle of sliding clamp loading in E. coli To Be Published
4S3I	Crystal structure of beta clamp from Helicobacter pylori Descriptor: DNA polymerase III subunit beta Authors: Pandey, P, Tarique, K.F, Abdul Rehman, S.A, Gourinath, S. Deposit date: 2015-01-28 Release date: 2016-02-03 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.946 Å) Cite: Structural insight into beta-Clamp and its interaction with DNA Ligase in Helicobacter pylori. Sci Rep, 6, 2016
4RKI	Crystal structure of sliding beta clamp from Helicobacter pylori Descriptor: DNA polymerase III subunit beta Authors: Satyawali, P, Tarique, K.F, Abdul Rehman, S.A, Gourinath, S. Deposit date: 2014-10-13 Release date: 2016-01-13 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.05 Å) Cite: Structural insight into beta-Clamp and its interaction with DNA Ligase in Helicobacter pylori. Sci Rep, 6, 2016
6MAN	Crystal structure of a DnaN sliding clamp DNA polymerase III subunit beta from Rickettsia bellii RML369-C Descriptor: 1,2-ETHANEDIOL, Beta sliding clamp, THIOCYANATE ION Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID) Deposit date: 2018-08-28 Release date: 2018-09-05 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (2.35 Å) Cite: Crystal structure of a DnaN sliding clamp DNA polymerase III subunit beta from Rickettsia bellii RML369-C To Be Published
3BEP	Structure of a sliding clamp on DNA Descriptor: 1-(3-hydroxypropyl)-2-{(1E,3E,5E)-5-[1-(3-hydroxypropyl)-3,3-dimethyl-1,3-dihydro-2H-indol-2-ylidene]penta-1,3-dien-1-y l}-3,3-dimethyl-3H-indolium, DNA (5'-D(*DTP*DTP*DTP*DTP*DAP*DTP*DAP*DCP*DGP*DAP*DTP*DGP*DGP*DG)-3'), DNA (5'-D(P*DCP*DCP*DCP*DAP*DTP*DCP*DGP*DTP*DAP*DT)-3'), ... Authors: Georgescu, R.E, Kim, S.S, Yurieva, O, Kuriyan, J, Kong, X.-P, O'Donnell, M. Deposit date: 2007-11-19 Release date: 2008-01-29 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.92 Å) Cite: Structure of a sliding clamp on DNA Cell(Cambridge,Mass.), 132, 2008
3U61	Structure of T4 Bacteriophage Clamp Loader Bound To Closed Clamp, DNA and ATP Analog and ADP Descriptor: ADENOSINE-5'-DIPHOSPHATE, DNA polymerase accessory protein 44, DNA polymerase accessory protein 62, ... Authors: Kelch, B.A, Makino, D.L, O'Donnell, M, Kuriyan, J. Deposit date: 2011-10-11 Release date: 2012-01-04 Method: X-RAY DIFFRACTION (3.2 Å) Cite: How a DNA polymerase clamp loader opens a sliding clamp. Science, 334, 2011
3U5Z	Structure of T4 Bacteriophage clamp loader bound to the T4 clamp, primer-template DNA, and ATP analog Descriptor: ADENOSINE-5'-DIPHOSPHATE, DNA polymerase accessory protein 44, DNA polymerase accessory protein 62, ... Authors: Kelch, B.A, Makino, D.L, O'Donnell, M, Kuriyan, J. Deposit date: 2011-10-11 Release date: 2012-01-04 Method: X-RAY DIFFRACTION (3.5 Å) Cite: How a DNA polymerase clamp loader opens a sliding clamp. Science, 334, 2011
1OK7	A Conserved protein binding-site on Bacterial Sliding Clamps Descriptor: DNA POLYMERASE III, DNA POLYMERASE IV Authors: Burnouf, D.Y, Olieric, V, Wagner, J, Fujii, S, Reinbolt, J, Fuchs, R.P.P, Dumas, P. Deposit date: 2003-07-18 Release date: 2004-07-15 Last modified: 2023-12-13 Method: X-RAY DIFFRACTION (1.65 Å) Cite: Structural and Biochemical Analysis of Sliding Clamp/Ligand Interactions Suggest a Competition between Replicative and Translesion DNA Polymerases J.Mol.Biol., 335, 2004
3U60	Structure of T4 Bacteriophage Clamp Loader Bound To Open Clamp, DNA and ATP Analog Descriptor: ADENOSINE-5'-DIPHOSPHATE, DNA polymerase accessory protein 44, DNA polymerase accessory protein 62, ... Authors: Kelch, B.A, Makino, D.L, O'Donnell, M, Kuriyan, J. Deposit date: 2011-10-11 Release date: 2012-01-04 Method: X-RAY DIFFRACTION (3.34 Å) Cite: How a DNA polymerase clamp loader opens a sliding clamp. Science, 334, 2011
7Z6H	Structure of DNA-bound human RAD17-RFC clamp loader and 9-1-1 checkpoint clamp Descriptor: Cell cycle checkpoint control protein RAD9A, Cell cycle checkpoint protein RAD1,Cell cycle checkpoint protein RAD17, Checkpoint protein HUS1, ... Authors: Day, M, Oliver, A.W, Pearl, L.H. Deposit date: 2022-03-11 Release date: 2022-05-04 Last modified: 2022-08-31 Method: ELECTRON MICROSCOPY (3.59 Å) Cite: Structure of the human RAD17-RFC clamp loader and 9-1-1 checkpoint clamp bound to a dsDNA-ssDNA junction. Nucleic Acids Res., 50, 2022
1JQJ	Mechanism of Processivity Clamp Opening by the Delta Subunit Wrench of the Clamp Loader Complex of E. coli DNA Polymerase III: Structure of the beta-delta complex Descriptor: DNA polymerase III, beta chain, delta subunit Authors: Jeruzalmi, D, Yurieva, O, Zhao, Y, Young, M, Stewart, J, Hingorani, M, O'Donnell, M, Kuriyan, J. Deposit date: 2001-08-07 Release date: 2001-11-07 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (2.9 Å) Cite: Mechanism of processivity clamp opening by the delta subunit wrench of the clamp loader complex of E. coli DNA polymerase III. Cell(Cambridge,Mass.), 106, 2001
1SXJ	Crystal Structure of the Eukaryotic Clamp Loader (Replication Factor C, RFC) Bound to the DNA Sliding Clamp (Proliferating Cell Nuclear Antigen, PCNA) Descriptor: ADENOSINE-5'-DIPHOSPHATE, Activator 1 37 kDa subunit, Activator 1 40 kDa subunit, ... Authors: Bowman, G.D, O'Donnell, M, Kuriyan, J. Deposit date: 2004-03-30 Release date: 2004-06-22 Last modified: 2024-10-09 Method: X-RAY DIFFRACTION (2.85 Å) Cite: Structural analysis of a eukaryotic sliding DNA clamp-clamp loader complex. Nature, 429, 2004
4YS0	Conformational changes of the clamp of the protein translocation ATPase SecA from Thermotoga maritima Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Protein translocase subunit SecA Authors: Chen, Y, Rapoport, T.A. Deposit date: 2015-03-16 Release date: 2015-06-03 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (1.897 Å) Cite: Conformational Changes of the Clamp of the Protein Translocation ATPase SecA. J.Mol.Biol., 427, 2015
7SH2	Structure of the yeast Rad24-RFC loader bound to DNA and the open 9-1-1 clamp Descriptor: ADENOSINE-5'-DIPHOSPHATE, Checkpoint protein RAD24, Crick strand, ... Authors: Zheng, F, Georgescu, R, Yao, Y.N, O'Donnell, M.E, Li, H. Deposit date: 2021-10-07 Release date: 2022-03-23 Last modified: 2024-06-05 Method: ELECTRON MICROSCOPY (3.23 Å) Cite: DNA is loaded through the 9-1-1 DNA checkpoint clamp in the opposite direction of the PCNA clamp. Nat.Struct.Mol.Biol., 29, 2022
7SGZ	Structure of the yeast Rad24-RFC loader bound to DNA and the closed 9-1-1 clamp Descriptor: ADENOSINE-5'-DIPHOSPHATE, Checkpoint protein RAD24, Crick strand, ... Authors: Zheng, F, Georgescu, R, Yao, Y.N, O'Donnell, M.E, Li, H. Deposit date: 2021-10-07 Release date: 2022-03-23 Last modified: 2024-06-05 Method: ELECTRON MICROSCOPY (3.17 Å) Cite: DNA is loaded through the 9-1-1 DNA checkpoint clamp in the opposite direction of the PCNA clamp. Nat.Struct.Mol.Biol., 29, 2022
3F1V	E. coli Beta Sliding Clamp, 148-153 Ala Mutant Descriptor: CALCIUM ION, CHLORIDE ION, DNA polymerase III subunit beta Authors: Cody, V. Deposit date: 2008-10-28 Release date: 2009-09-01 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (1.77 Å) Cite: Sliding clamp-DNA interactions are required for viability and contribute to DNA polymerase management in Escherichia coli. J.Mol.Biol., 387, 2009
1JQL	Mechanism of Processivity Clamp Opening by the Delta Subunit Wrench of the Clamp Loader Complex of E. coli DNA Polymerase III: Structure of beta-delta (1-140) Descriptor: DNA Polymerase III, BETA CHAIN, DELTA SUBUNIT Authors: Jeruzalmi, D, Yurieva, O, Zhao, Y, Young, M, Stewart, J, Hingorani, M, O'Donnell, M, Kuriyan, J. Deposit date: 2001-08-07 Release date: 2001-09-26 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Mechanism of processivity clamp opening by the delta subunit wrench of the clamp loader complex of E. coli DNA polymerase III. Cell(Cambridge,Mass.), 106, 2001

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