PDB: 615 resultsInfo pagesStatus searchChemie searchBIRD

---

1EMY	CRYSTAL STRUCTURE OF ASIAN ELEPHANT (ELEPHAS MAXIMUS) CYANO-MET MYOGLOBIN AT 1.78 ANGSTROMS RESOLUTION. PHE 29 (B10) ACCOUNTS FOR ITS UNUSUAL LIGAND BINDING PROPERTIES Descriptor: CYANIDE ION, MYOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE Authors: Bisig, D.A, Piontek, K. Deposit date: 1995-02-22 Release date: 1995-04-20 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.78 Å) Cite: Crystal structure of Asian elephant (Elephas maximus) cyano-metmyoglobin at 1.78-A resolution. Phe29(B10) accounts for its unusual ligand binding properties. J.Biol.Chem., 270, 1995
1AYI	COLICIN E7 IMMUNITY PROTEIN IM7 Descriptor: COLICIN E IMMUNITY PROTEIN 7 Authors: Dennis, C.A, Pauptit, R.A, Wallis, R, James, R, Moore, G.R, Kleanthous, C. Deposit date: 1997-11-04 Release date: 1998-01-28 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (2 Å) Cite: A structural comparison of the colicin immunity proteins Im7 and Im9 gives new insights into the molecular determinants of immunity-protein specificity. Biochem.J., 333 ( Pt 1), 1998
1MYZ	CO COMPLEX OF MYOGLOBIN MB-YQR AT RT SOLVED FROM LAUE DATA. Descriptor: CARBON MONOXIDE, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, ... Authors: Bourgeois, D, Vallone, B, Schotte, F, Arcovito, A, Miele, A.E, Sciara, G, Wulff, M, Anfinrud, P, Brunori, M. Deposit date: 2002-10-04 Release date: 2003-08-19 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Complex landscape of protein structural dynamics unveiled by nanosecond Laue crystallography. Proc.Natl.Acad.Sci.USA, 100, 2003
1MZ0	STRUCTURE OF MYOGLOBIN MB-YQR 316 ns AFTER PHOTOLYSIS OF CARBON MONOXIDE SOLVED FROM LAUE DATA AT RT. Descriptor: CARBON MONOXIDE, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, ... Authors: Bourgeois, D, Vallone, B, Schotte, F, Arcovito, A, Miele, A.E, Sciara, G, Wulff, M, Anfinrud, P, Brunori, M. Deposit date: 2002-10-04 Release date: 2003-07-29 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Complex landscape of protein structural dynamics unveiled by nanosecond Laue crystallography. Proc.Natl.Acad.Sci.USA, 100, 2003
1DXC	CO complex of Myoglobin Mb-YQR at 100K Descriptor: CARBON MONOXIDE, MYOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE, ... Authors: Brunori, M, Vallone, B, Cutruzzola, F, Travaglini-Allocatelli, C, Berendzen, J, Chu, K, Sweet, R.M, Schlichting, I. Deposit date: 2000-01-03 Release date: 2000-04-02 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (1.4 Å) Cite: The Role of Cavities in Protein Dynamics: Crystal Structure of a Novel Photolytic Intermediate of Myoglobin Proc.Natl.Acad.Sci.USA, 97, 2000
1DXD	Photolyzed CO complex of Myoglobin Mb-YQR at 20K Descriptor: CARBON MONOXIDE, MYOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE, ... Authors: Brunori, M, Vallone, B, Cutruzzola, F, Travaglini-Allocatelli, C, Berendzen, J, Chu, K, Sweet, R.M, Schlichting, I. Deposit date: 2000-01-03 Release date: 2000-03-27 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (1.4 Å) Cite: The Role of Cavities in Protein Dynamics: Crystal Structure of a Photolytic Intermediate of a Mutant Myoglobin. Proc.Natl.Acad.Sci.USA, 97, 2000
2JBG	crystal structure of the mutant N560A of the nuclease domain of ColE7 in complex with Im7 Descriptor: COLICIN E7, COLICIN-E7 IMMUNITY PROTEIN, SULFATE ION, ... Authors: Huang, H, Yuan, H.S. Deposit date: 2006-12-07 Release date: 2007-04-03 Last modified: 2023-12-13 Method: X-RAY DIFFRACTION (2.2 Å) Cite: The Conserved Asparagine in the Hnh Motif Serves an Important Structural Role in Metal Finger Endonucleases. J.Mol.Biol., 368, 2007
2JB0	CRYSTAL STRUCTURE OF THE MUTANT H573A OF THE NUCLEASE DOMAIN OF COLE7 IN COMPLEX WITH IM7 Descriptor: COLICIN E7, COLICIN E7 IMMUNITY PROTEIN, ZINC ION Authors: Huang, H, Yuan, H.S. Deposit date: 2006-12-01 Release date: 2007-04-03 Last modified: 2023-12-13 Method: X-RAY DIFFRACTION (1.91 Å) Cite: The Conserved Asparagine in the Hnh Motif Serves an Important Structural Role in Metal Finger Endonucleases. J.Mol.Biol., 368, 2007
2JAZ	CRYSTAL STRUCTURE OF THE MUTANT N560D OF THE NUCLEASE DOMAIN OF COLE7 IN COMPLEX WITH IM7 Descriptor: COLICIN E7, COLICIN E7 IMMUNITY PROTEIN, PHOSPHATE ION, ... Authors: Huang, H, Yuan, H.S. Deposit date: 2006-12-01 Release date: 2007-04-03 Last modified: 2023-12-13 Method: X-RAY DIFFRACTION (2.03 Å) Cite: The Conserved Asparagine in the Hnh Motif Serves an Important Structural Role in Metal Finger Endonucleases. J.Mol.Biol., 368, 2007
1ZNV	How a His-metal finger endonuclease ColE7 binds and cleaves DNA with a transition metal ion cofactor Descriptor: Colicin E7, Colicin E7 immunity protein, NICKEL (II) ION, ... Authors: Doudeva, L.G, Huang, H, Hsia, K.C, Shi, Z, Li, C.L, Shen, Y, Yuan, H.S. Deposit date: 2005-05-12 Release date: 2006-03-14 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (2 Å) Cite: Crystal structural analysis and metal-dependent stability and activity studies of the ColE7 endonuclease domain in complex with DNA/Zn2+ or inhibitor/Ni2+ Protein Sci., 15, 2006
4F37	Structure of the tethered N-terminus of Alzheimer's disease A peptide Descriptor: Colicin-E7 immunity protein, Fab WO2 anti-amyloid-beta antibody Fab fragment, Im7 immunity protein Authors: Nisbet, R.M, Nuttall, S.D, Caine, J.M, Rober, R, Hittaki, M, Pearce, L.A, Davydova, N, Masters, C.L, Varghese, J.N, Streltsov, V.A. Deposit date: 2012-05-09 Release date: 2013-05-15 Last modified: 2024-11-13 Method: X-RAY DIFFRACTION (2.57 Å) Cite: Structural studies of the tethered N-terminus of the Alzheimer's disease amyloid-beta peptide. Proteins, 81, 2013
2IVH	Crystal structure of the nuclease domain of ColE7 (H545Q mutant) in complex with an 18-bp duplex DNA Descriptor: 5'-D(*GP*GP*AP*AP*TP*TP*CP*GP*AP*TP *CP*GP*AP*AP*TP*TP*CP*C)-3', COLCIN-E7, ZINC ION Authors: Wang, Y.T, Yang, W.J, Li, C.L, Doudeva, L.G, Yuan, H.S. Deposit date: 2006-06-13 Release date: 2007-01-02 Last modified: 2023-12-13 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Structural Basis for Sequence-Dependent DNA Cleavage by Nonspecific Endonucleases. Nucleic Acids Res., 35, 2007
2W6W	Crystal structure of recombinant Sperm Whale Myoglobin under 1atm of Xenon Descriptor: GLYCEROL, MYOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE, ... Authors: Miele, A.E, Draghi, F, Renzi, F, Sciara, G, Johnson, K.A, Vallone, B, Brunori, M, Savino, C. Deposit date: 2008-12-19 Release date: 2009-04-28 Last modified: 2023-12-13 Method: X-RAY DIFFRACTION (1.99 Å) Cite: Pattern of Cavities in Globins: The Case of Human Hemoglobin. Biopolymers, 91, 2009
5WNW	Chaperone Spy bound to Im7 6-45 ensemble Descriptor: CHLORIDE ION, Colicin-E7 immunity protein, IMIDAZOLE, ... Authors: Horowitz, S, Salmon, L, Koldewey, P, Ahlstrom, L.S, Martin, R, Xu, Q, Afonine, P.V, Trievel, R.C, Brooks, C.L, Bardwell, J.C.A. Deposit date: 2017-08-01 Release date: 2017-08-16 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (1.79 Å) Cite: Visualizing chaperone-assisted protein folding. Nat. Struct. Mol. Biol., 23, 2016
3FBD	Crystal structure of the nuclease domain of COLE7(D493Q mutant) in complex with an 18-BP duplex DNA Descriptor: 5'-D(*DGP*DGP*DAP*DAP*DTP*DTP*DCP*DGP*DAP*DTP*DCP*DGP*DAP*DAP*DTP*DTP*DCP*DC)-3', Colicin-E7 Authors: Wang, Y.T, Doudeva, L.G, Yuan, H.S. Deposit date: 2008-11-19 Release date: 2009-11-03 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.9 Å) Cite: Redesign of high-affinity nonspecific nucleases with altered sequence preference To be Published
7ST3	Consequences of HLA single chain trimer mutations on peptide presentation and binding affinity Descriptor: Protein E7 peptide,Beta-2-microglobulin,MHC class I antigen chimera, VHH Authors: Finton, K.A.K, Rupert, P.B. Deposit date: 2021-11-11 Release date: 2022-11-23 Last modified: 2024-10-23 Method: X-RAY DIFFRACTION (2.78 Å) Cite: Effects of HLA single chain trimer design on peptide presentation and stability. Front Immunol, 14, 2023
4PNG	Glutathione S-transferase from Drosophila melanogaster - isozyme E7 Descriptor: L-GAMMA-GLUTAMYL-3-SULFINO-L-ALANYLGLYCINE, LD04004p Authors: Scian, M, Le Trong, I, Mannervik, B, Atkins, W.M, Stenkamp, R.E. Deposit date: 2014-05-23 Release date: 2015-05-27 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (1.53 Å) Cite: Comparison of epsilon- and delta-class glutathione S-transferases: the crystal structures of the glutathione S-transferases DmGSTE6 and DmGSTE7 from Drosophila melanogaster. Acta Crystallogr.,Sect.D, 71, 2015
6XLT	The 1.48 Angstrom crystal structure of evolved galactose oxidase variant A3.E7 Descriptor: ACETATE ION, CALCIUM ION, COPPER (II) ION, ... Authors: Liu, A, Li, J. Deposit date: 2020-06-29 Release date: 2021-02-03 Last modified: 2024-11-20 Method: X-RAY DIFFRACTION (1.478 Å) Cite: Formation of Monofluorinated Radical Cofactor in Galactose Oxidase through Copper-Mediated C-F Bond Scission. J.Am.Chem.Soc., 142, 2020
4B3W	Crystal structure of human cytoglobin H(E7)Q mutant Descriptor: ACETATE ION, CYANIDE ION, CYTOGLOBIN, ... Authors: Gabba, M, Abbruzzetti, S, Spyrakis, F, Forti, F, Bruno, S, Mozzarelli, A, Luque, F.J, Viappiani, C, Cozzini, P, Nardini, M, Germani, F, Bolognesi, M, Moens, L, Dewilde, S. Deposit date: 2012-07-26 Release date: 2013-01-23 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Co Rebinding Kinetics and Molecular Dynamics Simulations Highlight Dynamic Regulation of Internal Cavities in Human Cytoglobin. Plos One, 8, 2013
3GKL	Following evolutionary paths to high affinity and selectivity protein-protein interactions using Colicin7 and Immunity proteins Descriptor: Colicin-E7, Colicin-E9 immunity protein, ZINC ION Authors: Dym, O, Tawfik, D.S, Israel Structural Proteomics Center (ISPC) Deposit date: 2009-03-11 Release date: 2009-09-08 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Following evolutionary paths to high affinity and selectivity protein-protein interactions To be Published
3GJN	Following evolutionary paths to high affinity and selectivity protein-protein interactions using Colicin7 and Immunity proteins Descriptor: Colicin-E7, Colicin-E9 immunity protein, ZINC ION Authors: Dym, O, Tawfik, D.S. Deposit date: 2009-03-09 Release date: 2009-09-15 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.48 Å) Cite: Following evolutionary paths to protein-protein interactions with high affinity and selectivity Nat.Struct.Mol.Biol., 16, 2009
1PT3	Crystal structures of nuclease-ColE7 complexed with octamer DNA Descriptor: 5'-GCGATCGC-3', Colicin E7 Authors: Hsia, K.C, Chak, K.F, Cheng, Y.S, Ku, W.Y, Yuan, H.S. Deposit date: 2003-06-22 Release date: 2004-03-30 Last modified: 2023-08-16 Method: X-RAY DIFFRACTION (2.5 Å) Cite: DNA binding and degradation by the HNH protein ColE7. STRUCTURE, 12, 2004
5QMB	Group deposition of library data - Crystal Structure of EcDsbA after initial refinement with no ligand modelled (structure E7_1) Descriptor: Thiol:disulfide interchange protein Authors: Ilyichova, O.V, Bentley, M.R, Doak, B.C, Scanlon, M.J. Deposit date: 2019-01-27 Release date: 2020-02-05 Last modified: 2024-10-23 Method: X-RAY DIFFRACTION (1.897 Å) Cite: Rapid Elaboration of Fragments into Leads by X-ray Crystallographic Screening of Parallel Chemical Libraries (REFiLX). J.Med.Chem., 63, 2020
2AXC	Crystal structure of ColE7 translocation domain Descriptor: Colicin E7, GLYCEROL, SULFATE ION Authors: Cheng, Y.S, Shi, Z, Doudeva, L.G, Yang, W.Z, Chak, K.F, Yuan, H.S. Deposit date: 2005-09-04 Release date: 2006-03-14 Last modified: 2024-10-23 Method: X-RAY DIFFRACTION (1.7 Å) Cite: High-resolution crystal structure of a truncated ColE7 translocation domain: implications for colicin transport across membranes J.Mol.Biol., 356, 2006
1ZNS	Crystal structure of N-ColE7/12-bp DNA/Zn complex Descriptor: 5'-D(*CP*GP*GP*GP*AP*TP*AP*TP*CP*CP*CP*G)-3', Colicin E7, ZINC ION Authors: Doudeva, L.G, Huang, H, Hsia, K.C, Shi, Z, Li, C.L, Shen, Y, Yuan, H.S. Deposit date: 2005-05-12 Release date: 2006-03-14 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Crystal structural analysis and metal-dependent stability and activity studies of the ColE7 endonuclease domain in complex with DNA/Zn2+ or inhibitor/Ni2+ Protein Sci., 15, 2006

<12345678910111213141516>